CmaCh06G007830 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G007830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPeroxisomal biogenesis factor, putative
LocationCma_Chr06 : 4070163 .. 4072840 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTAGGGTCAACGAGTCAAACCCAATATCGAATGGCAACCGTCAGATCGATTTGCTGACGAAATTTTTGCACATTGCGTTGGTTACACCGCCATTCTGAGAATCTGTCACTCGCAATCCCAAGCCGATTTGTTTCTCAAATACCCATTTCCCAGTCCTCCGCGGCATTCACTCTCGAAACTGGGATAAACCGATAGAAACAAAGCAAAATCTTCGAAATCCTGTTAAATTTTCATCCACGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGTATGCCTTCAAACTTCATGCAATCCGTAGTGGGTTTCCGTTTCTTTAACGTTTTTCTTCATGTTTCTTATGAATTTGTCTCGGATTGTCTCAGGAGGTACTTTGGACGATTTTCAGCAAATCGACCTTAACCATGCCGTTTCGAGGTTTATATCAATCAATTTCTGTGTTGGAAGCTTTGTTTTGTAGCGTATTTAGTTGGATTCTTGATGTTTTTAGTTGTGTGGTGTTGTAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGAGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAGGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTCTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGTCCCTAAAGCTGCTGGTGATGATTTTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGGGGAGATGGCTGGCTCTCAGGTACATTGCTTGAAAAGCCTTTGGAACTTTTCAATGTTGAATTTGGCCTTTCATGGAAATACTTTTCCTAGTTTTGATGTGGCTTGAACATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAGGAATCACACCCCTTCACTTGTCACTTTTAGCTTTTATGGCTTTTCATTTGGCTTCTCCAAAAGGTCTCATAATGAAGATGTATTCTTTACTTATATATGAACTTATGATCAACCCTTAATTAGTCGATGTGGGACTCCTCTTCCGACAATTCTCCCCGGGAACAAAGTACACCATAGAGCCTCCCTTGAGGCCTATGGATGGAGGCCTTGAACACCTTCCCCTTAATCCAGGCTCGACTCCTTCTTTGGAGCCTTCGAACAAAGTACAACATTTGTTCGACACTTGAGTCACTTTTGACTACATTTTCAATGGTCTCAACTTCTTTGTTCGACATTTGAAGATTCTATTCACATGGCTAAGTTAAAGGACATGACTTTGATACCATGTTAGGAATCACGACTCTCTACCATGGTACGATATTGTCCACTTTGAGCATAACCTTTCATGGTTTTGTTTTTGGCTTCCCCAAAAGGCCTCATACCAATGAAGATGTATTCCTTGTTTATATATAAATCCATGATCAACCCCTTAATTAGGTGATGTGGAACTCCTCTCCCAACAATCCTCAATAGTTTTGTAATTTTATGTGTTTTGATGCTGACTTAGGGTGAGTTTGGCATTAAGTTTGAACACTGCGAAGTACTTTTAGCCGATTAAACTCTTTTCAAGGTCTTTTAAGAATACTTTTATGCTATTTGGTCCATAGTTTTGAGGCCTTTCTTCTGAAAATGCACATAGAAAAGTGCGGGGAATAAAGATGCTGGGAGTTCCCATTGTTCCCATCAGAATCTTCTTTCTTGATCCGTTATCTTAAAGGACAATATGTTTTTTAGTTATCTTTTTTTATATTTTGATTTAGGTCCCTCCATTATTGTGTAACGGCCCAAGTCCACCGCCAGCAGATATTGTCCTCTTTAGACTTTTCTTTGAATTTTTAAAATACGTCTACTAGGATGAGGTTTCCACACATTTTTATGGAGTCTTGATCGCTCTTTTCTGATCCTAATCTGAATGATGTGTAGCTAGTTTTTATGTGTTTTATCCAATCAAAATCTTACCATGAACTCTAACATGCACTATTTCTTCAACCATAGAACATGGAGTCGATGGTCGAGAGGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAAGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAACTCGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTTGACAAAATTGTTGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTGTGAGTTTATTGTTCTCATGTTTTGAATTAGCTGATTATTTTGTGCTGTCAATAATTAACATATTATTTGCTTGCAGATCTCCTGAGATGTTGGAATCTCAGACAAATTGTTGTATAATGTGAGGTAAGGCTTTTGGATGCTCTAATTTGTGGTGCTTCCTTCCATTTATTCTCATATTTGTATTGTCTCAAACAAATTACTTTGTCCAATAATCATGGGTTCAATTTCAATGTTTATTGGACTCGGAATAGATATCTCTCACACACACAAATGAGATTTTTGTTGTATCAGAAGTGATTTCTTCTATCTTCTCTGT

mRNA sequence

ATGGTCCTCCGCGGCATTCACTCTCGAAACTGGGATAAACCGATAGAAACAAAGCAAAATCTTCGAAATCCTGTTAAATTTTCATCCACGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGAGGTACTTTGGACGATTTTCAGCAAATCGACCTTAACCATGCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGAGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAGGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTCTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGTCCCTAAAGCTGCTGGTGATGATTTTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGGGGAGATGGCTGGCTCTCAGAACATGGAGTCGATGGTCGAGAGGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAAGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAACTCGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTTGACAAAATTGTTGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAATCTCAGACAAATTGTTGTATAATGTGAGGTAAGGCTTTTGGATGCTCTAATTTGTGGTGCTTCCTTCCATTTATTCTCATATTTGTATTGTCTCAAACAAATTACTTTGTCCAATAATCATGGGTTCAATTTCAATGTTTATTGGACTCGGAATAGATATCTCTCACACACACAAATGAGATTTTTGTTGTATCAGAAGTGATTTCTTCTATCTTCTCTGT

Coding sequence (CDS)

ATGGTCCTCCGCGGCATTCACTCTCGAAACTGGGATAAACCGATAGAAACAAAGCAAAATCTTCGAAATCCTGTTAAATTTTCATCCACGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGAGGTACTTTGGACGATTTTCAGCAAATCGACCTTAACCATGCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGAGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAGGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTCTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGTCCCTAAAGCTGCTGGTGATGATTTTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGGGGAGATGGCTGGCTCTCAGAACATGGAGTCGATGGTCGAGAGGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAAGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAACTCGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTTGACAAAATTGTTGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAATCTCAGACAAATTGTTGTATAATGTGA

Protein sequence

MVLRGIHSRNWDKPIETKQNLRNPVKFSSTADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDWVKQFGEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCCIM
Homology
[Close]
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match: PE192_ARATH (Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.1e-79
Identity = 153/243 (62.96%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 33  HSDDLHELLDRGTLDDFQQIDL---NHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMK 92
           H+DDL ELLD   LDDF+ ++L   N  V +     +   +LPS VQGLGMGLPD+RS K
Sbjct: 6   HTDDLDELLD-SALDDFKDLNLTQRNGGVKKEEGDKKETESLPSGVQGLGMGLPDMRSKK 65

Query: 93  KGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKA-AGDDFQDALMEDWVKQFGEMA 152
           KGK+K++KE HV+EALDKLREQTRE VKGLES++  +   G D  DA++EDW+KQF  + 
Sbjct: 66  KGKKKIAKEDHVTEALDKLREQTRETVKGLESLSSKQQPTGSD--DAMVEDWIKQFENLT 125

Query: 153 GSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIK 212
           GS ++ES+V+ MMQQLLSK+IL EP+KEIG RYPKWLEEH++SL+KEE++RYS+Q ELIK
Sbjct: 126 GSNDLESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHESSLNKEEFDRYSRQYELIK 185

Query: 213 DLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNC 272
           +LN+VYENEP+N  KI+E+MQKMQECGQPP+DIVQE+ P FD  +L Q+SP+MLES  NC
Sbjct: 186 ELNLVYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMDPGFDFASLGQMSPDMLESSPNC 245

[Close]
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match: PE191_ARATH (Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana GN=PEX19-1 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-77
Identity = 156/248 (62.90%), Postives = 196/248 (79.03%), Query Frame = 1 

Query: 33  HSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGA---------ESRGALPSEVQGLGMGLP 92
           H+DDL ELLD   LDDF+ ++L+H   RN   A         E    LPS VQGLGMGLP
Sbjct: 5   HTDDLDELLD-SALDDFKDLNLSH--QRNQREAQEEEEKKRKEETVLLPSGVQGLGMGLP 64

Query: 93  DLRSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDWVKQ 152
           D+RS K+GKQKVSKE HV+EALDKLREQTRE VKGLES++  +    D  D ++ED++KQ
Sbjct: 65  DMRSKKRGKQKVSKEDHVAEALDKLREQTRETVKGLESISSKQLPASD-DDGMVEDFLKQ 124

Query: 153 FGEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQ 212
           F ++AGS+++ES+VE MMQQLLSK+IL EP+KE+G RYPKWL+E++ASLSKE+Y+RYSQQ
Sbjct: 125 FEDLAGSKDLESIVETMMQQLLSKDILHEPMKELGARYPKWLKENEASLSKEDYKRYSQQ 184

Query: 213 LELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLE 272
            +LI++LN VYENEP+N  KI+E+MQKMQECGQPP+DIV+E+ P FD  +L Q+SPEMLE
Sbjct: 185 YKLIEELNAVYENEPNNSSKIMEIMQKMQECGQPPSDIVKEIDPGFDFASLGQISPEMLE 244

[Close]
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match: PEX19_RAT (Peroxisomal biogenesis factor 19 OS=Rattus norvegicus GN=Pex19 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-12
Identity = 44/134 (32.84%), Postives = 76/134 (56.72%), Query Frame = 1 

Query: 149 GSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIK 208
           G  N+  +++ +MQ LLSK++L   +KEI E+YP+WL+ H+ S+  E++E+Y QQ  ++ 
Sbjct: 167 GEGNILPIMQSLMQNLLSKDVLYPSLKEITEKYPEWLQSHQESIPPEQFEKYQQQHSVMG 226

Query: 209 DLNIVYENEPD---------NFDKIVELMQKMQECGQPPNDIVQELGP--DFDLTNLAQL 268
            +   +E E            F+ +++LMQ++Q+ G PP ++  E+ P  +FDL  L   
Sbjct: 227 KICEQFEAETPTDSEATHRARFEAVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDALNLS 286

Query: 269 SPEMLESQTNCCIM 272
            P     +  C IM
Sbjct: 287 GPPGANGE-QCLIM 299

[Close]
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match: PEX19_PONAB (Peroxisomal biogenesis factor 19 OS=Pongo abelii GN=PEX19 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 1 

Query: 149 GSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIK 208
           G  N+  +++ +MQ LLSK++L   +KEI E+YP+WL+ H+ SL  E++E+Y +Q  ++ 
Sbjct: 167 GEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMC 226

Query: 209 DLNIVYENEPD---------NFDKIVELMQKMQECGQPPNDIVQELGP--DFDLTNLAQL 268
            +   +E E            F+ +++LMQ++Q+ G PP ++  E+ P  +FDL  L  L
Sbjct: 227 KICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDAL-NL 286

Query: 269 SPEMLESQTNCCIM 272
           S     S   C IM
Sbjct: 287 SGPPGASGEQCLIM 299

[Close]
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match: PEX19_HUMAN (Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 1 

Query: 149 GSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIK 208
           G  N+  +++ +MQ LLSK++L   +KEI E+YP+WL+ H+ SL  E++E+Y +Q  ++ 
Sbjct: 167 GEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMC 226

Query: 209 DLNIVYENEPD---------NFDKIVELMQKMQECGQPPNDIVQELGP--DFDLTNLAQL 268
            +   +E E            F+ +++LMQ++Q+ G PP ++  E+ P  +FDL  L  L
Sbjct: 227 KICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDAL-NL 286

Query: 269 SPEMLESQTNCCIM 272
           S     S   C IM
Sbjct: 287 SGPPGASGEQCLIM 299

[Close]
BLAST of CmaCh06G007830 vs. TrEMBL
Match: A0A0A0L283_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020030 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-104
Identity = 205/241 (85.06%), Postives = 216/241 (89.63%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMKK 90
           ADH DDLHELLD   LDDFQ+ DLN ++SRNGDGAESR  LPS VQGLGMGLPDLRS KK
Sbjct: 2   ADHPDDLHELLD-SALDDFQKFDLNPSLSRNGDGAESRAVLPSGVQGLGMGLPDLRSKKK 61

Query: 91  GKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDWVKQFGEMAGS 150
           GKQKVSKESHVSEALDKLREQTREAVKGLESV+ PK      +DALMEDWVKQF EMAGS
Sbjct: 62  GKQKVSKESHVSEALDKLREQTREAVKGLESVSGPKPG----EDALMEDWVKQFEEMAGS 121

Query: 151 QNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIKDL 210
           Q+MES+VE MMQQLLSKEIL EP+KEIGERYPKWLE+HKASLSKEEYERYSQQ  LIKDL
Sbjct: 122 QDMESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDL 181

Query: 211 NIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCCI 270
           NIVYE EPDNF+KIVELMQKMQECGQPPNDIVQEL PDFDL+NLAQLSPEMLESQ NCCI
Sbjct: 182 NIVYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCI 237

Query: 271 M 272
           M
Sbjct: 242 M 237

[Close]
BLAST of CmaCh06G007830 vs. TrEMBL
Match: A0A061G438_THECC (Peroxin 19-2 OS=Theobroma cacao GN=TCM_015969 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.4e-90
Identity = 185/247 (74.90%), Postives = 209/247 (84.62%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNG--DGAESR---GALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     R G  DG E +   G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTPPSQRGGGGDGEEKKPESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV +ESHV+EALDKLREQTRE VKGLES++ P   GDD  +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLRESHVTEALDKLREQTRETVKGLESMSKP--GGDDLGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEH+ASLSKEEYERYS Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHEASLSKEEYERYSHQH 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYENEP+NF +IV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPEMLES
Sbjct: 182 ELIKELNGVYENEPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLES 241

Query: 271 QTNCCIM 272
           Q NCCIM
Sbjct: 242 QQNCCIM 245

[Close]
BLAST of CmaCh06G007830 vs. TrEMBL
Match: A0A0B0NAV5_GOSAR (Peroxisome biogenesis 19-2-like protein OS=Gossypium arboreum GN=F383_15508 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.1e-90
Identity = 182/247 (73.68%), Postives = 208/247 (84.21%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDG-----AESRGALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     + G G      +  G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTRPPQKLGGGDGEGKKQESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV KESHV+EALDKLREQTRE VKGLES++ P A  DDF +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLKESHVTEALDKLREQTRETVKGLESMSKPGA--DDFGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEHKA+LSKEEYERYS+Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSKEEYERYSRQY 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYEN+P+NF KIV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPE+L S
Sbjct: 182 ELIKELNGVYENDPNNFTKIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEILNS 241

Query: 271 QTNCCIM 272
           Q NCCIM
Sbjct: 242 QQNCCIM 245

[Close]
BLAST of CmaCh06G007830 vs. TrEMBL
Match: A0A0D2S2X3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G198700 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.6e-89
Identity = 180/247 (72.87%), Postives = 208/247 (84.21%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDG-----AESRGALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     + G G      +  G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTRPPQKLGGGDGEGKKQESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV KESHV+EALDKLREQTRE VKGLES++ P A  DDF +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLKESHVTEALDKLREQTRETVKGLESMSKPGA--DDFGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEHKA+LS+EEYERYS+Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSEEEYERYSRQY 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYEN+P+NF +IV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPEML S
Sbjct: 182 ELIKELNGVYENDPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLNS 241

Query: 271 QTNCCIM 272
           Q NCCI+
Sbjct: 242 QQNCCII 245

[Close]
BLAST of CmaCh06G007830 vs. TrEMBL
Match: B9GYB5_POPTR (Peroxisomal protein PEX19 OS=Populus trichocarpa GN=POPTR_0003s07470g PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.9e-89
Identity = 181/251 (72.11%), Postives = 198/251 (78.88%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGAESRG----------ALPSEVQGLGM 90
           AD  DDL +LLD   LDDFQ ++L  A  R+GDG               +LP+ VQGLGM
Sbjct: 2   ADQHDDLEQLLD-SALDDFQNLNLAPASQRSGDGNGENSNQKEKQTCLPSLPTGVQGLGM 61

Query: 91  GLPDLRSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDW 150
           GLPDL+S KKGKQKVSKESHV EALDKLREQTREAVKGLESVT      D  QDA M+DW
Sbjct: 62  GLPDLKSKKKGKQKVSKESHVEEALDKLREQTREAVKGLESVTAASKPDDSSQDAFMDDW 121

Query: 151 VKQFGEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERY 210
           VKQF E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYPKWLEEHKASLSKE++ERY
Sbjct: 122 VKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPKWLEEHKASLSKEDHERY 181

Query: 211 SQQLELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPE 270
           S Q ELIKDLN VYEN+P+N  KI +LMQKMQECGQPPNDIVQEL PD D  NL QLSPE
Sbjct: 182 SHQYELIKDLNDVYENDPNNHTKIFDLMQKMQECGQPPNDIVQELAPDIDFANLGQLSPE 241

Query: 271 MLESQTNCCIM 272
           MLESQ NCCIM
Sbjct: 242 MLESQGNCCIM 251

[Close]
BLAST of CmaCh06G007830 vs. TAIR10
Match: AT5G17550.1 (AT5G17550.1 peroxin 19-2)

HSP 1 Score: 295.0 bits (754), Expect = 4.6e-80
Identity = 153/243 (62.96%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 33  HSDDLHELLDRGTLDDFQQIDL---NHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMK 92
           H+DDL ELLD   LDDF+ ++L   N  V +     +   +LPS VQGLGMGLPD+RS K
Sbjct: 6   HTDDLDELLD-SALDDFKDLNLTQRNGGVKKEEGDKKETESLPSGVQGLGMGLPDMRSKK 65

Query: 93  KGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKA-AGDDFQDALMEDWVKQFGEMA 152
           KGK+K++KE HV+EALDKLREQTRE VKGLES++  +   G D  DA++EDW+KQF  + 
Sbjct: 66  KGKKKIAKEDHVTEALDKLREQTRETVKGLESLSSKQQPTGSD--DAMVEDWIKQFENLT 125

Query: 153 GSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIK 212
           GS ++ES+V+ MMQQLLSK+IL EP+KEIG RYPKWLEEH++SL+KEE++RYS+Q ELIK
Sbjct: 126 GSNDLESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHESSLNKEEFDRYSRQYELIK 185

Query: 213 DLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNC 272
           +LN+VYENEP+N  KI+E+MQKMQECGQPP+DIVQE+ P FD  +L Q+SP+MLES  NC
Sbjct: 186 ELNLVYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMDPGFDFASLGQMSPDMLESSPNC 245

[Close]
BLAST of CmaCh06G007830 vs. TAIR10
Match: AT3G03490.1 (AT3G03490.1 peroxin 19-1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78
Identity = 156/248 (62.90%), Postives = 196/248 (79.03%), Query Frame = 1 

Query: 33  HSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGA---------ESRGALPSEVQGLGMGLP 92
           H+DDL ELLD   LDDF+ ++L+H   RN   A         E    LPS VQGLGMGLP
Sbjct: 5   HTDDLDELLD-SALDDFKDLNLSH--QRNQREAQEEEEKKRKEETVLLPSGVQGLGMGLP 64

Query: 93  DLRSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDWVKQ 152
           D+RS K+GKQKVSKE HV+EALDKLREQTRE VKGLES++  +    D  D ++ED++KQ
Sbjct: 65  DMRSKKRGKQKVSKEDHVAEALDKLREQTRETVKGLESISSKQLPASD-DDGMVEDFLKQ 124

Query: 153 FGEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQ 212
           F ++AGS+++ES+VE MMQQLLSK+IL EP+KE+G RYPKWL+E++ASLSKE+Y+RYSQQ
Sbjct: 125 FEDLAGSKDLESIVETMMQQLLSKDILHEPMKELGARYPKWLKENEASLSKEDYKRYSQQ 184

Query: 213 LELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLE 272
            +LI++LN VYENEP+N  KI+E+MQKMQECGQPP+DIV+E+ P FD  +L Q+SPEMLE
Sbjct: 185 YKLIEELNAVYENEPNNSSKIMEIMQKMQECGQPPSDIVKEIDPGFDFASLGQISPEMLE 244

[Close]
BLAST of CmaCh06G007830 vs. NCBI nr
Match: gi|659095951|ref|XP_008448848.1| (PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 6.0e-106
Identity = 207/242 (85.54%), Postives = 219/242 (90.50%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMKK 90
           ADHSDDLHELLD   LDDFQ+ DLN ++SRNGDG ESR  LPS VQGLGMGLPDLRS KK
Sbjct: 2   ADHSDDLHELLD-SALDDFQKFDLNPSLSRNGDGGESRAVLPSGVQGLGMGLPDLRSKKK 61

Query: 91  GKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQFGEMAG 150
           GKQKVSKESHVSEALDKLREQTREAVKGLESV+ PK   D+F +DALMEDWVKQF EMAG
Sbjct: 62  GKQKVSKESHVSEALDKLREQTREAVKGLESVSGPKPGVDEFGKDALMEDWVKQFEEMAG 121

Query: 151 SQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIKD 210
           SQ+MES+VE MMQQLLSKEIL EP+KEIGERYPKWLE+HKASLSKEEYERYSQQ  LIKD
Sbjct: 122 SQDMESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKD 181

Query: 211 LNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCC 270
           LNIVYE EPDNF+KIVELMQKMQECGQPPNDIVQEL PDFDL+NLAQLSPEMLESQ NCC
Sbjct: 182 LNIVYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCC 241

Query: 271 IM 272
           IM
Sbjct: 242 IM 242

[Close]
BLAST of CmaCh06G007830 vs. NCBI nr
Match: gi|778675391|ref|XP_011650400.1| (PREDICTED: peroxisome biogenesis protein 19-2 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.9e-104
Identity = 205/241 (85.06%), Postives = 216/241 (89.63%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDGAESRGALPSEVQGLGMGLPDLRSMKK 90
           ADH DDLHELLD   LDDFQ+ DLN ++SRNGDGAESR  LPS VQGLGMGLPDLRS KK
Sbjct: 2   ADHPDDLHELLD-SALDDFQKFDLNPSLSRNGDGAESRAVLPSGVQGLGMGLPDLRSKKK 61

Query: 91  GKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDFQDALMEDWVKQFGEMAGS 150
           GKQKVSKESHVSEALDKLREQTREAVKGLESV+ PK      +DALMEDWVKQF EMAGS
Sbjct: 62  GKQKVSKESHVSEALDKLREQTREAVKGLESVSGPKPG----EDALMEDWVKQFEEMAGS 121

Query: 151 QNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQLELIKDL 210
           Q+MES+VE MMQQLLSKEIL EP+KEIGERYPKWLE+HKASLSKEEYERYSQQ  LIKDL
Sbjct: 122 QDMESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDL 181

Query: 211 NIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCCI 270
           NIVYE EPDNF+KIVELMQKMQECGQPPNDIVQEL PDFDL+NLAQLSPEMLESQ NCCI
Sbjct: 182 NIVYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCI 237

Query: 271 M 272
           M
Sbjct: 242 M 237

[Close]
BLAST of CmaCh06G007830 vs. NCBI nr
Match: gi|590676800|ref|XP_007039840.1| (Peroxin 19-2 [Theobroma cacao])

HSP 1 Score: 340.9 bits (873), Expect = 2.1e-90
Identity = 185/247 (74.90%), Postives = 209/247 (84.62%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNG--DGAESR---GALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     R G  DG E +   G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTPPSQRGGGGDGEEKKPESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV +ESHV+EALDKLREQTRE VKGLES++ P   GDD  +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLRESHVTEALDKLREQTRETVKGLESMSKP--GGDDLGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEH+ASLSKEEYERYS Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHEASLSKEEYERYSHQH 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYENEP+NF +IV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPEMLES
Sbjct: 182 ELIKELNGVYENEPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLES 241

Query: 271 QTNCCIM 272
           Q NCCIM
Sbjct: 242 QQNCCIM 245

[Close]
BLAST of CmaCh06G007830 vs. NCBI nr
Match: gi|728830507|gb|KHG09950.1| (Peroxisome biogenesis 19-2 -like protein [Gossypium arboreum])

HSP 1 Score: 338.6 bits (867), Expect = 1.0e-89
Identity = 182/247 (73.68%), Postives = 208/247 (84.21%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDG-----AESRGALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     + G G      +  G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTRPPQKLGGGDGEGKKQESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV KESHV+EALDKLREQTRE VKGLES++ P A  DDF +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLKESHVTEALDKLREQTRETVKGLESMSKPGA--DDFGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEHKA+LSKEEYERYS+Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSKEEYERYSRQY 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYEN+P+NF KIV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPE+L S
Sbjct: 182 ELIKELNGVYENDPNNFTKIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEILNS 241

Query: 271 QTNCCIM 272
           Q NCCIM
Sbjct: 242 QQNCCIM 245

[Close]
BLAST of CmaCh06G007830 vs. NCBI nr
Match: gi|823152186|ref|XP_012475924.1| (PREDICTED: peroxisome biogenesis protein 19-2-like [Gossypium raimondii])

HSP 1 Score: 335.9 bits (860), Expect = 6.6e-89
Identity = 180/247 (72.87%), Postives = 208/247 (84.21%), Query Frame = 1 

Query: 31  ADHSDDLHELLDRGTLDDFQQIDLNHAVSRNGDG-----AESRGALPSEVQGLGMGLPDL 90
           ADHSDDL +LLD   LDDFQ ++L     + G G      +  G+LPS VQGLGMGLPDL
Sbjct: 2   ADHSDDLDQLLD-SALDDFQNLNLTRPPQKLGGGDGEGKKQESGSLPSGVQGLGMGLPDL 61

Query: 91  RSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTVPKAAGDDF-QDALMEDWVKQF 150
           +S KKGKQKV KESHV+EALDKLREQTRE VKGLES++ P A  DDF +DA+MEDWVKQF
Sbjct: 62  KSKKKGKQKVLKESHVTEALDKLREQTRETVKGLESMSKPGA--DDFGKDAMMEDWVKQF 121

Query: 151 GEMAGSQNMESMVERMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQL 210
            E+AGSQ+MES+VE MMQQLLSKEIL EP+KEIGERYP+WLEEHKA+LS+EEYERYS+Q 
Sbjct: 122 EELAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSEEEYERYSRQY 181

Query: 211 ELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLES 270
           ELIK+LN VYEN+P+NF +IV+LMQKMQECGQPPNDIVQEL P+FDL+NL QLSPEML S
Sbjct: 182 ELIKELNGVYENDPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLNS 241

Query: 271 QTNCCIM 272
           Q NCCI+
Sbjct: 242 QQNCCII 245

The following BLAST results are available for this feature:
BLAST of CmaCh06G007830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PE192_ARATH8.1e-7962.96Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1[more]
PE191_ARATH2.0e-7762.90Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana GN=PEX19-1 PE=1 SV=1[more]
PEX19_RAT2.3e-1232.84Peroxisomal biogenesis factor 19 OS=Rattus norvegicus GN=Pex19 PE=1 SV=1[more]
PEX19_PONAB2.9e-1234.33Peroxisomal biogenesis factor 19 OS=Pongo abelii GN=PEX19 PE=2 SV=1[more]
PEX19_HUMAN2.9e-1234.33Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1[more]
BLAST of CmaCh06G007830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L283_CUCSA1.3e-10485.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020030 PE=4 SV=1[more]
A0A061G438_THECC1.4e-9074.90Peroxin 19-2 OS=Theobroma cacao GN=TCM_015969 PE=4 SV=1[more]
A0A0B0NAV5_GOSAR7.1e-9073.68Peroxisome biogenesis 19-2-like protein OS=Gossypium arboreum GN=F383_15508 PE=4... [more]
A0A0D2S2X3_GOSRA4.6e-8972.87Uncharacterized protein OS=Gossypium raimondii GN=B456_004G198700 PE=4 SV=1[more]
B9GYB5_POPTR7.9e-8972.11Peroxisomal protein PEX19 OS=Populus trichocarpa GN=POPTR_0003s07470g PE=4 SV=1[more]
BLAST of CmaCh06G007830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17550.14.6e-8062.96 peroxin 19-2[more]
AT3G03490.11.1e-7862.90 peroxin 19-1[more]
BLAST of CmaCh06G007830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095951|ref|XP_008448848.1|6.0e-10685.54PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis melo][more]
gi|778675391|ref|XP_011650400.1|1.9e-10485.06PREDICTED: peroxisome biogenesis protein 19-2 [Cucumis sativus][more]
gi|590676800|ref|XP_007039840.1|2.1e-9074.90Peroxin 19-2 [Theobroma cacao][more]
gi|728830507|gb|KHG09950.1|1.0e-8973.68Peroxisome biogenesis 19-2 -like protein [Gossypium arboreum][more]
gi|823152186|ref|XP_012475924.1|6.6e-8972.87PREDICTED: peroxisome biogenesis protein 19-2-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006708Pex19
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009405 pathogenesis
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005777 peroxisome
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G007830.1CmaCh06G007830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006708Pex19 proteinPANTHERPTHR12774PEROXISOMAL FARNESYLATED PROTEINcoord: 2..271
score: 3.2
IPR006708Pex19 proteinPFAMPF04614Pex19coord: 91..259
score: 5.4
NoneNo IPR availablePANTHERPTHR12774:SF2PEROXISOMAL BIOGENESIS FACTOR 19coord: 2..271
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G007830Cucsa.320920Cucumber (Gy14) v1cgycmaB0897
CmaCh06G007830Cla005638Watermelon (97103) v1cmawmB790
CmaCh06G007830Csa3G020030Cucumber (Chinese Long) v2cmacuB825
CmaCh06G007830MELO3C013940Melon (DHL92) v3.5.1cmameB764
CmaCh06G007830ClCG10G002690Watermelon (Charleston Gray)cmawcgB727
CmaCh06G007830CSPI03G02690Wild cucumber (PI 183967)cmacpiB838
CmaCh06G007830CmoCh06G008030Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G007830CmoCh16G011880Cucurbita moschata (Rifu)cmacmoB806
CmaCh06G007830Lsi07G012980Bottle gourd (USVL1VR-Ls)cmalsiB775
CmaCh06G007830Cp4.1LG14g09330Cucurbita pepo (Zucchini)cmacpeB816
CmaCh06G007830Cp4.1LG08g07340Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G007830MELO3C013940.2Melon (DHL92) v3.6.1cmamedB869
CmaCh06G007830CsaV3_3G002720Cucumber (Chinese Long) v3cmacucB0975
CmaCh06G007830Cla97C10G187250Watermelon (97103) v2cmawmbB845
CmaCh06G007830Bhi11G000158Wax gourdcmawgoB0989
CmaCh06G007830CsGy3G002620Cucumber (Gy14) v2cgybcmaB438
CmaCh06G007830Carg25172Silver-seed gourdcarcmaB0742
CmaCh06G007830Carg24852Silver-seed gourdcarcmaB0580
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G007830CmaCh16G011360Cucurbita maxima (Rimu)cmacmaB356
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G007830Watermelon (97103) v2cmawmbB836
CmaCh06G007830Wax gourdcmawgoB0998
CmaCh06G007830Cucumber (Gy14) v1cgycmaB0839
CmaCh06G007830Wild cucumber (PI 183967)cmacpiB853
CmaCh06G007830Cucumber (Chinese Long) v2cmacuB838
CmaCh06G007830Melon (DHL92) v3.5.1cmameB746
CmaCh06G007830Watermelon (Charleston Gray)cmawcgB733
CmaCh06G007830Watermelon (97103) v1cmawmB805
CmaCh06G007830Cucumber (Gy14) v2cgybcmaB695
CmaCh06G007830Melon (DHL92) v3.6.1cmamedB843
CmaCh06G007830Cucumber (Chinese Long) v3cmacucB0990