CmaCh05G006560 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTTGCCGTCGTTCTCATTTCTCAACTACCGTGAGCTGACCAACAAGCTCCCACGCCACCTCCTCATCCTTCTCCTTCTTTTTAACTTCTTCATTTCCCATCTCCTTCTCTCCCAAATTCCACAGTTCCATAAACACTCCAACAGACAAATTCATCAAAAAAAAAATGGCTATGTCCACCACCTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGCTCCCAAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGTAATTACTTACCACACTCCGATCATTCATTTTGGTTCTGTAATTGAAGAAATCGATCTGCCTTCGAATTTACAAAACCCAGGGATTAAATTTAAACATCTGTGTGGAATTGGGCAGGAATGGAAATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATGGCTCTGCAAATGGTCGGAGAAAGTGGTGGCGTAGAAATGGGAGATGTCAATTTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCTCAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCAGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTATGTAATTTCCAAATCCCTAAATATCAATTTACCAATTCTTCAATACCATTTTACAATATTACAATATTACCATTTCAATGTAATTTAATATTCTTAATTTTTCTAATAATCTTATAAATATATTTAGATTATGAC CCCTTGCCGTCGTTCTCATTTCTCAACTACCGTGAGCTGACCAACAAGCTCCCACGCCACCTCCTCATCCTTCTCCTTCTTTTTAACTTCTTCATTTCCCATCTCCTTCTCTCCCAAATTCCACAGTTCCATAAACACTCCAACAGACAAATTCATCAAAAAAAAAATGGCTATGTCCACCACCTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGCTCCCAAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGAAATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATGGCTCTGCAAATGGTCGGAGAAAGTGGTGGCGTAGAAATGGGAGATGTCAATTTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCTCAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCAGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTATGTAATTTCCAAATCCCTAAATATCAATTTACCAATTCTTCAATACCATTTTACAATATTACAATATTACCATTTCAATGTAATTTAATATTCTTAATTTTTCTAATAATCTTATAAATATATTTAGATTATGAC ATGGCTATGTCCACCACCTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGCTCCCAAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGAAATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATGGCTCTGCAAATGGTCGGAGAAAGTGGTGGCGTAGAAATGGGAGATGTCAATTTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCTCAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCAGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTATGTAA MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
BLAST of CmaCh05G006560 vs. TrEMBL
Match: A0A0A0LLU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379360 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 4.5e-53 Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 1
BLAST of CmaCh05G006560 vs. TrEMBL
Match: A0A061GQG6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038341 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.3e-19 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1
BLAST of CmaCh05G006560 vs. TrEMBL
Match: B9RKU9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053560 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.5e-19 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of CmaCh05G006560 vs. TrEMBL
Match: A5BJF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004448 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.7e-18 Identity = 58/145 (40.00%), Postives = 81/145 (55.86%), Query Frame = 1
BLAST of CmaCh05G006560 vs. TrEMBL
Match: A0A068U8M8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019574001 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17 Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 1
BLAST of CmaCh05G006560 vs. TAIR10
Match: AT2G25625.1 (AT2G25625.1 unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 1
BLAST of CmaCh05G006560 vs. NCBI nr
Match: gi|700207786|gb|KGN62905.1| (hypothetical protein Csa_2G379360 [Cucumis sativus]) HSP 1 Score: 215.3 bits (547), Expect = 6.5e-53 Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 1
BLAST of CmaCh05G006560 vs. NCBI nr
Match: gi|659088755|ref|XP_008445145.1| (PREDICTED: uncharacterized protein LOC103488267 [Cucumis melo]) HSP 1 Score: 211.5 bits (537), Expect = 9.4e-52 Identity = 110/140 (78.57%), Postives = 120/140 (85.71%), Query Frame = 1
BLAST of CmaCh05G006560 vs. NCBI nr
Match: gi|590579425|ref|XP_007013783.1| (Uncharacterized protein TCM_038341 [Theobroma cacao]) HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1
BLAST of CmaCh05G006560 vs. NCBI nr
Match: gi|255546567|ref|XP_002514343.1| (PREDICTED: uncharacterized protein LOC8284834 [Ricinus communis]) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of CmaCh05G006560 vs. NCBI nr
Match: gi|225430167|ref|XP_002284793.1| (PREDICTED: uncharacterized protein LOC100261242 [Vitis vinifera]) HSP 1 Score: 100.1 bits (248), Expect = 3.0e-18 Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |