CmaCh05G001460 (gene) Cucurbita maxima (Rimu)

NameCmaCh05G001460
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr05 : 649732 .. 649968 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCGCACTATAGGACCACCGCGGTCTTCGCTCCTCATCGGCGGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCTTCTGCGATGCAGTGGTAATTCGGAATCCCAATCTCTTGTGTTAGTCAATATTCGATGA

mRNA sequence

ATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCGCACTATAGGACCACCGCGGTCTTCGCTCCTCATCGGCGGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCTTCTGCGATGCAGTGGTAATTCGGAATCCCAATCTCTTGTGTTAGTCAATATTCGATGA

Coding sequence (CDS)

ATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCGCACTATAGGACCACCGCGGTCTTCGCTCCTCATCGGCGGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCTTCTGCGATGCAGTGGTAATTCGGAATCCCAATCTCTTGTGTTAGTCAATATTCGATGA

Protein sequence

MKAASNLSSSLPISPSHYRTTAVFAPHRRIASPSTAVGDAFSSCRTHLTRSPHHRYSLKLLRCSGNSESQSLVLVNIR
BLAST of CmaCh05G001460 vs. TrEMBL
Match: A0A0A0LN96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354800 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.5e-11
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 1

Query: 1  MKAASNLSSSLPISPS--HY-RTTAVFAPHRR-IASPSTAVGDAFSSCRTHLTRSPHHRY 60
          MKA  +L+SSLP+SPS  HY RTTA+F P R  IAS STA+G AFSSCRTHLT  PHH  
Sbjct: 1  MKAVFDLTSSLPLSPSPSHYCRTTAIFTPSRDLIASTSTALGGAFSSCRTHLTHFPHHTS 60

Query: 61 SLKLLRCS 65
          S   LRC+
Sbjct: 61 SFSPLRCN 68

BLAST of CmaCh05G001460 vs. NCBI nr
Match: gi|449450275|ref|XP_004142889.1| (PREDICTED: adenine phosphoribosyltransferase 1 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-11
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 1

Query: 1  MKAASNLSSSLPISPS--HY-RTTAVFAPHRR-IASPSTAVGDAFSSCRTHLTRSPHHRY 60
          MKA  +L+SSLP+SPS  HY RTTA+F P R  IAS STA+G AFSSCRTHLT  PHH  
Sbjct: 1  MKAVFDLTSSLPLSPSPSHYCRTTAIFTPSRDLIASTSTALGGAFSSCRTHLTHFPHHTS 60

Query: 61 SLKLLRCS 65
          S   LRC+
Sbjct: 61 SFSPLRCN 68

BLAST of CmaCh05G001460 vs. NCBI nr
Match: gi|659087655|ref|XP_008444565.1| (PREDICTED: adenine phosphoribosyltransferase 1 isoform X1 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-10
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 1

Query: 1  MKAASNLSSSLPISPS---HYRTTAVFAPHRRI-ASPSTAVGDAFSSCRTH-LTRSPHHR 60
          MKA  NL+SSLP+SPS   +YRTTA+F P   + ASPSTAVG AFSSCRTH LT  P H 
Sbjct: 1  MKAVFNLTSSLPLSPSPSHYYRTTAIFTPSPDLFASPSTAVGGAFSSCRTHLLTHFPQHP 60

Query: 61 YSLKLLRCS 65
           S   LRC+
Sbjct: 61 SSFSPLRCN 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LN96_CUCSA5.5e-1164.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354800 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|449450275|ref|XP_004142889.1|7.9e-1164.71PREDICTED: adenine phosphoribosyltransferase 1 [Cucumis sativus][more]
gi|659087655|ref|XP_008444565.1|8.8e-1062.32PREDICTED: adenine phosphoribosyltransferase 1 isoform X1 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055086 nucleobase-containing small molecule metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G001460.1CmaCh05G001460.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G001460Watermelon (97103) v2cmawmbB800
CmaCh05G001460Watermelon (97103) v2cmawmbB820
CmaCh05G001460Watermelon (97103) v2cmawmbB832
CmaCh05G001460Wax gourdcmawgoB0943
CmaCh05G001460Wax gourdcmawgoB0955
CmaCh05G001460Wax gourdcmawgoB0961
CmaCh05G001460Cucurbita maxima (Rimu)cmacmaB067
CmaCh05G001460Cucurbita maxima (Rimu)cmacmaB199
CmaCh05G001460Cucurbita maxima (Rimu)cmacmaB167
CmaCh05G001460Cucurbita maxima (Rimu)cmacmaB426
CmaCh05G001460Cucurbita maxima (Rimu)cmacmaB458
CmaCh05G001460Cucumber (Gy14) v1cgycmaB0967
CmaCh05G001460Cucumber (Gy14) v1cgycmaB1094
CmaCh05G001460Cucurbita moschata (Rifu)cmacmoB755
CmaCh05G001460Cucurbita moschata (Rifu)cmacmoB761
CmaCh05G001460Cucurbita moschata (Rifu)cmacmoB770
CmaCh05G001460Cucurbita moschata (Rifu)cmacmoB779
CmaCh05G001460Cucurbita moschata (Rifu)cmacmoB786
CmaCh05G001460Wild cucumber (PI 183967)cmacpiB793
CmaCh05G001460Wild cucumber (PI 183967)cmacpiB810
CmaCh05G001460Cucumber (Chinese Long) v2cmacuB784
CmaCh05G001460Cucumber (Chinese Long) v2cmacuB801
CmaCh05G001460Melon (DHL92) v3.5.1cmameB727
CmaCh05G001460Melon (DHL92) v3.5.1cmameB741
CmaCh05G001460Watermelon (Charleston Gray)cmawcgB702
CmaCh05G001460Watermelon (Charleston Gray)cmawcgB712
CmaCh05G001460Watermelon (97103) v1cmawmB753
CmaCh05G001460Watermelon (97103) v1cmawmB758
CmaCh05G001460Cucurbita pepo (Zucchini)cmacpeB766
CmaCh05G001460Cucurbita pepo (Zucchini)cmacpeB780
CmaCh05G001460Cucurbita pepo (Zucchini)cmacpeB787
CmaCh05G001460Cucurbita pepo (Zucchini)cmacpeB797
CmaCh05G001460Bottle gourd (USVL1VR-Ls)cmalsiB717
CmaCh05G001460Bottle gourd (USVL1VR-Ls)cmalsiB723
CmaCh05G001460Bottle gourd (USVL1VR-Ls)cmalsiB724
CmaCh05G001460Bottle gourd (USVL1VR-Ls)cmalsiB739
CmaCh05G001460Cucumber (Gy14) v2cgybcmaB250
CmaCh05G001460Cucumber (Gy14) v2cgybcmaB558
CmaCh05G001460Cucumber (Gy14) v2cgybcmaB967
CmaCh05G001460Melon (DHL92) v3.6.1cmamedB809
CmaCh05G001460Melon (DHL92) v3.6.1cmamedB821
CmaCh05G001460Melon (DHL92) v3.6.1cmamedB836
CmaCh05G001460Melon (DHL92) v3.6.1cmamedB840
CmaCh05G001460Silver-seed gourdcarcmaB0256
CmaCh05G001460Silver-seed gourdcarcmaB0452
CmaCh05G001460Silver-seed gourdcarcmaB0635
CmaCh05G001460Silver-seed gourdcarcmaB1071
CmaCh05G001460Cucumber (Chinese Long) v3cmacucB0926
CmaCh05G001460Cucumber (Chinese Long) v3cmacucB0945
CmaCh05G001460Cucumber (Chinese Long) v3cmacucB0954
CmaCh05G001460Cucumber (Chinese Long) v3cmacucB0959