CmaCh01G016150 (gene) Cucurbita maxima (Rimu)

NameCmaCh01G016150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr01 : 11110885 .. 11112692 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGGTATTTTACTTCAATGTGTAAGAAGTTTTGATGAGTTCTGTGAGTTTGACATATGCCTGTATGCCTGCCCGCCCCCATCAAACGTAGAAGTATTTGTTCCTGTCTGACCATTGAATCGGTTCAAACCGTTTGCTTAAGGAATAGAGGTTTTTGATATAGTTGTGCACGTTTTTCAATGAAATTTGTCAGGTTGCACTAAGTTACTTACGGATGTATGCATGTAGTTCGGGAATACATTGGGTACACCCTACACACAAGCAGCACCCGAGCGTGAATGAGATGACATGTGAACTATGACATTGAAGATTTAAGGTATTTTAGTTCAATGGGTAAGTTTTGATGAGTTCTAAGCTTGTGAGCCTCCCCCCCCCCTCAAATGTAGAAGTATTTGTTCCTATCTGACTATTGAATCGGTTCAAACCGTTTGTGTAAGGAATAGAGGTTTTTGATGTAGTTGCGCACGTTTTTCAATGGAATTTACTAGGTTGCACTAAGTTTCTTACAGATGTATGCATGTGGTTCAGGAATACATTGGGTACGCCCTACACACAAGTAGCACCCGAGCGTGAATGAGATGACATATTTAAGGTATTTTAGTTCATGTGTAAGTTTTGATGAGTTCTAAGTTTGTGAGTCTGCCATATGCCTGCCTGTCGGTCTGCCCCCATCAAACATAGAAGTATTTGTTCCTGTTTGACCATTGAATCGATTCAAACCGTTTGCTTAAGGAAAGAGGTTTTTGATGTAGTTGCACACGTTTTTCAATGAATTTGCCAGGTTGCGCTAAGTTACTTACGGATTTATGCATGTAGTTCGAGAATACATTGGGTACACCCTACACACAAGTAGCACCCGAGCGTGAATGAGATGAGATGTGAACCATGACATTGAAGATTACCTAGTAGAATAATTGTACCATCACATTTATTTACAAATATATATAATTATAAAAAAATGAATAAATGTGGATGTGTGTGTTTGTAAGTTTGTGGATTGGTTTTTGGTAGGATTAGGGAATTATAATAATGAATTAAAGGGAGTCACATGATGACACGTGAGAGCGGTCCCTCGGTAGTGGAGTTTGCACGTGTTCAACTTGAGATTTCCCTGCTCTTCTCCAATCTTCATTTTTAGCATTTTATGGGAATTTTATATTTAATTTCGAGATTTTGAATTTTCATCCATTTTACCAATTAAAAAGAGATAAATTTACTTTTACCAAGACCGTAAATTATACACTTACTGAAAATGGGCCGAGTAAGTGGGCCGATATTGGCCCAATAGCCTGAACAAATGACTTAACATTTTAGCCCATCTAAGGCCCAAAATCAAAAGAAGGAAAAGGAAAGGAGGAAGAACCCGTGCGTGCCAGCTGTTTAGTACATGTCAGGCTGTCAATCCGAAGATTTCTAAATATAAAAATAAATAAATAAATAGAAAAGCTGTCGAAACAGAAAACGCACAGTTTTGAACATCGTCTCTGAACCATCCGTCTCAATCCAACGGCTTAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

mRNA sequence

ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

Coding sequence (CDS)

ATGTTTCTTAGCTTCCTACTTGGTATCAACTCGATGCTTTTGGGACTTAGTGGATTTGTAAATTCTCTAATACAAAATTTAAGATTTAATCTCTCTCTCCACTCTGGTCTTCGTCCTCAACGCAATTATCGCTCCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGGAGAGAAAAAGAAAAGAAAGAACACAGAAAGAAGGGAAAGAAAAATTATCGAACCCCCAAATTCTCCAGCTCCTTCGGTTTCTTCTCCCTCTATTTCGAATCCTGCTCTCTCAGATTCTTCAGATCTAA

Protein sequence

MFLSFLLGINSMLLGLSGFVNSLIQNLRFNLSLHSGLRPQRNYRSSLSLSLSRARAERKRKERTQKEGKEKLSNPQILQLLRFLLPLFRILLSQILQI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G016150.1CmaCh01G016150.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 51..71
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh01G016150Cucumber (Chinese Long) v3cmacucB0526
CmaCh01G016150Cucumber (Chinese Long) v3cmacucB0537
CmaCh01G016150Watermelon (97103) v2cmawmbB447
CmaCh01G016150Watermelon (97103) v2cmawmbB502
CmaCh01G016150Wax gourdcmawgoB0575
CmaCh01G016150Wax gourdcmawgoB0601
CmaCh01G016150Cucurbita maxima (Rimu)cmacmaB044
CmaCh01G016150Cucurbita maxima (Rimu)cmacmaB179
CmaCh01G016150Cucumber (Gy14) v1cgycmaB0455
CmaCh01G016150Cucumber (Gy14) v1cgycmaB0863
CmaCh01G016150Cucurbita moschata (Rifu)cmacmoB431
CmaCh01G016150Cucurbita moschata (Rifu)cmacmoB484
CmaCh01G016150Cucurbita moschata (Rifu)cmacmoB468
CmaCh01G016150Wild cucumber (PI 183967)cmacpiB443
CmaCh01G016150Wild cucumber (PI 183967)cmacpiB448
CmaCh01G016150Cucumber (Chinese Long) v2cmacuB440
CmaCh01G016150Cucumber (Chinese Long) v2cmacuB445
CmaCh01G016150Melon (DHL92) v3.5.1cmameB416
CmaCh01G016150Melon (DHL92) v3.5.1cmameB425
CmaCh01G016150Watermelon (Charleston Gray)cmawcgB388
CmaCh01G016150Watermelon (Charleston Gray)cmawcgB431
CmaCh01G016150Watermelon (97103) v1cmawmB419
CmaCh01G016150Watermelon (97103) v1cmawmB457
CmaCh01G016150Cucurbita pepo (Zucchini)cmacpeB490
CmaCh01G016150Cucurbita pepo (Zucchini)cmacpeB463
CmaCh01G016150Cucurbita pepo (Zucchini)cmacpeB502
CmaCh01G016150Cucurbita pepo (Zucchini)cmacpeB515
CmaCh01G016150Bottle gourd (USVL1VR-Ls)cmalsiB425
CmaCh01G016150Bottle gourd (USVL1VR-Ls)cmalsiB455
CmaCh01G016150Cucumber (Gy14) v2cgybcmaB201
CmaCh01G016150Cucumber (Gy14) v2cgybcmaB359
CmaCh01G016150Melon (DHL92) v3.6.1cmamedB477
CmaCh01G016150Melon (DHL92) v3.6.1cmamedB488
CmaCh01G016150Silver-seed gourdcarcmaB0080
CmaCh01G016150Silver-seed gourdcarcmaB0894
CmaCh01G016150Silver-seed gourdcarcmaB1401