CmaCh01G002960 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G002960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MYB-like DNA-binding domain protein
Location	Cma_Chr01 : 1423113 .. 1424995 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCAACTCGTTCAAGTTAGATATTATATATTCAAAATCACACCACTTGAAACGATGCCGTTTTGAATCTGGGTGGGTGGCCGGCACCGGCGACGACGACGACGACGACAATGGGTAGACGGCCGTGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAAGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGGTGACTTCCCACCTACATTTTCCCGATAAAATAAATTATTCAACGAGATAGCTATCCTTTTCGTCATTTTTACTAATCTCTTTTTACCGGCCATTGAACGTACGTTGCATCCGTACATCTATCGGTTAAAAAAGATTAGCTATTTTTATAGGACCCGTTATAGTAATTTTTGTTTTTAGGGCTTCTCCGATGCGGGAAGAGTTGCCGACTTCGATGGATCAACTATTTAAGATGTGATTTGGTGCGGGGGAACATTACGACCGACGAAGAAAATCTTATTATTAAACTACATTCTACCTTAGGAAACAGGTAACTCAAATTAGTTTAACTCTTAATTTTAATTATTATAAAGTTTGATTTTTAATTTTTTAATATTTGAAATATATTTCAAAATGAAATTTATAATAGGTAATAAATTGAATGAAAAAATACATCCTTTTTAAGACATAAATTTAATGAGAAAATGAGTTGTTTTAAAGAATTGAAATAATTATTTTTAATAATCTGAAATATATTCTCCCAATGCAGTTCACGAGCTAAGAAGAGAAAAAAAAAATTAAAATAAAGTGAATAATAATATTAATCATTAATTATTATTATTATTTTTGGCTTTTTGTAGACTAAAGTCAAGCATGTCAGACAGGCTAGAATCACAACATGAAAGGAATATGAAAATAGAGGGATAAATTTTAATATAGGGAATAATTTATTTGGATTTTTCTTTATTTTTAATTTTCTATTATTTTGAGAAAATAATTTGGAGGGTTTTATTAATTTTAATAAAAAAATTCACTTTTTAATATGCGAAAAAAAAAAAAGGGAAATATTGTCGTTTTCTAATTTTGATTCAAAATTTTCAGGTGGTCTTTAATCGCTAGTCACCTACCAGGCAGAACAGACAACGAGATAAAAAATTACTGGAACTCTCACTTGAGTCGTCAAATTCATACGATCCGGCGCCGGAGCGGCAACGACGATGGGTCGGTAATTGTCGACGTGGCACGGCTGAGCCTTCCGCCGCGGCGGAAGGGCAGCCGTGGGCGGCGTAGCAAGGAAGCGGCGTTGGCGGTGGAGACAGAGACGGAAACAGAGACGGCGGCGAGAGAGAAAACTGTTTATGGGGCTGTGGATGATCCAGCGGAGGAAAGAGTTAGTTCCAACGACGGAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTTGATAACGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGATAACGACGACGACGACATTAAAGTCACCGCCGCTACCGGTGGCGCCGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTCCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGATGGGGAGGAATGGGAGACCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAATCACCGCCGGCGGCGTGATCTTGATTTTGAATGTTTGTAAATTAATGTGTTGATTCTATGGGATATTGGGATCGTTAATTTTGTATATTTTCTTTTAGCTTTCTCTTTGGGACTCTGCAAATCCGTGTAAAGTTCTTTCTTTTTACTTTTTACCGCTG

mRNA sequence

GAGCAACTCGTTCAAGTTAGATATTATATATTCAAAATCACACCACTTGAAACGATGCCGTTTTGAATCTGGGTGGGTGGCCGGCACCGGCGACGACGACGACGACGACAATGGGTAGACGGCCGTGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAAGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGGGCTTCTCCGATGCGGGAAGAGTTGCCGACTTCGATGGATCAACTATTTAAGATGTGATTTGGTGCGGGGGAACATTACGACCGACGAAGAAAATCTTATTATTAAACTACATTCTACCTTAGGAAACAGGTGGTCTTTAATCGCTAGTCACCTACCAGGCAGAACAGACAACGAGATAAAAAATTACTGGAACTCTCACTTGAGTCGTCAAATTCATACGATCCGGCGCCGGAGCGGCAACGACGATGGGTCGGTAATTGTCGACGTGGCACGGCTGAGCCTTCCGCCGCGGCGGAAGGGCAGCCGTGGGCGGCGTAGCAAGGAAGCGGCGTTGGCGGTGGAGACAGAGACGGAAACAGAGACGGCGGCGAGAGAGAAAACTGTTTATGGGGCTGTGGATGATCCAGCGGAGGAAAGAGTTAGTTCCAACGACGGAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTTGATAACGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGATAACGACGACGACGACATTAAAGTCACCGCCGCTACCGGTGGCGCCGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTCCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGATGGGGAGGAATGGGAGACCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAATCACCGCCGGCGGCGTGATCTTGATTTTGAATGTTTGTAAATTAATGTGTTGATTCTATGGGATATTGGGATCGTTAATTTTGTATATTTTCTTTTAGCTTTCTCTTTGGGACTCTGCAAATCCGTGTAAAGTTCTTTCTTTTTACTTTTTACCGCTG

Coding sequence (CDS)

ATGGGTAGACGGCCGTGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAAGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGGGCTTCTCCGATGCGGGAAGAGTTGCCGACTTCGATGGATCAACTATTTAAGATGTGATTTGGTGCGGGGGAACATTACGACCGACGAAGAAAATCTTATTATTAAACTACATTCTACCTTAGGAAACAGGTGGTCTTTAATCGCTAGTCACCTACCAGGCAGAACAGACAACGAGATAAAAAATTACTGGAACTCTCACTTGAGTCGTCAAATTCATACGATCCGGCGCCGGAGCGGCAACGACGATGGGTCGGTAATTGTCGACGTGGCACGGCTGAGCCTTCCGCCGCGGCGGAAGGGCAGCCGTGGGCGGCGTAGCAAGGAAGCGGCGTTGGCGGTGGAGACAGAGACGGAAACAGAGACGGCGGCGAGAGAGAAAACTGTTTATGGGGCTGTGGATGATCCAGCGGAGGAAAGAGTTAGTTCCAACGACGGAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTTGATAACGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGATAACGACGACGACGACATTAAAGTCACCGCCGCTACCGGTGGCGCCGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTCCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGATGGGGAGGAATGGGAGACCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAA

Protein sequence

MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIRRRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAALAVETETETETAAREKTVYGAVDDPAEERVSSNDGIISKTTDVGGSATLSFDNDDMSLDLDAFLDWDNDNDDDDIKVTAATGGAEVETGGECSSISCSFRLDSPWNWESFVDGEEWETGEDLPAAAVVESDAVISWLLS

Homology

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BLAST of CmaCh01G002960 vs. Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-62
Identity = 124/214 (57.94%), Postives = 151/214 (70.56%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGLK+GRWTAEED  L  YI  +GEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR D+ RGNI+ +EE++IIKLH+TLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT R
Sbjct: 61  LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120

Query: 121 RR--SGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAALAVET--------ETETETAA 180
           R+  +G DD ++ +D+++L    RR+G R  GR  K +A   +         E +   AA
Sbjct: 121 RKYTAGPDDTAIAIDMSKLQSADRRRGGRTPGRPPKASASRTKQADADQPGGEAKGPAAA 180

Query: 181 REKTVYGAVDDPAEERVSSNDGIISKTTDVGGSA 203
                +  V +P   + +S+ G      + G S+
Sbjct: 181 ASSPRHSDVVNPGPNQPNSSSGSTGTAEEEGPSS 214

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BLAST of CmaCh01G002960 vs. Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.3e-57
Identity = 125/239 (52.30%), Postives = 149/239 (62.34%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVG+K+GRWTAEED  L  YI +NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT-I 120
           LR DL RGNIT +EE L++KLHSTLGNRWSLIA HLPGRTDNEIKNYWNSHLSR++H  I
Sbjct: 61  LRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFI 120

Query: 121 RRRSGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAALAVETETETETAAREKT----- 180
           R+ S + D S ++     S PP  +  R  GR S+ A       T+T    +        
Sbjct: 121 RKPSISQDVSAVIMTNASSAPPPPQAKRRLGRTSRSAMKPKIHRTKTRKTKKTSAPPEPN 180

Query: 181 --VYGAVDDPAEERVSSNDGIISKTTDV-------------GGSATLSFDNDDMSLDLD 217
             V GA  +      S  +  + +  D              G +  L+FD+D + L LD
Sbjct: 181 ADVAGADKEALMVESSGAEAELGRPCDYYGDDCNKNLMSINGDNGVLTFDDDIIDLLLD 239

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BLAST of CmaCh01G002960 vs. Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.2e-48
Identity = 99/163 (60.74%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK    KG WT EEDDRL  YI A+GEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHL-----SRQ 120
           LR DL RGN + +E+ LIIKLHS LGN+WSLIA  LPGRTDNEIKNYWN+H+     SR 
Sbjct: 61  LRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRG 120

Query: 121 IHTIRRRSGNDDGSVI-VDVARLSLPPRRKGSRGRRSKEAALA 158
           I  +  R+ N D +   + ++  S     KG+  RR  E A A
Sbjct: 121 IDPVTHRAINSDHAASNITISFESAQRDDKGAVFRRDAEPAKA 163

[Close]

BLAST of CmaCh01G002960 vs. Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 107/213 (50.23%), Postives = 129/213 (60.56%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK    KG WT EEDDRL  YI A+GEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSH-----LSRQ 120
           LR DL RGN T +E+ LIIKLHS LGN+WSLIA  LPGRTDNEIKNYWN+H     LSR 
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 121 IHTIRRRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAA--LAVETETETETAAREKTV 180
           I     RS ND  +    V  +S           + K A   +  E  +  +    +  +
Sbjct: 121 IDPTTHRSINDGTASQDQVTTISFSNANSKEEDTKHKVAVDIMIKEENSPVQERCPDLNL 180

Query: 181 YGAVDDPAEERVSSNDGIISKTTDVGGSATLSF 207
              +  P +++++ +   + KT    GS+TL F
Sbjct: 181 DLKISPPCQQQINYHQENL-KTGGRNGSSTLCF 212

[Close]

BLAST of CmaCh01G002960 vs. Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-47
Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK    +G WT EED+RL  YI A+GEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 117
           LR DL RGN T DE++LI+KLHS LGN+WSLIA+ LPGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 116

[Close]

BLAST of CmaCh01G002960 vs. TrEMBL
Match: A0A096ZXF2_BETVU (R2R3-MYB flavonol regulator OS=Beta vulgaris subsp. vulgaris GN=MYB12 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.2e-62
Identity = 108/151 (71.52%), Postives = 129/151 (85.43%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK+GLK+GRWT EED +L KYI  NGEGSWRS+PKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKIGLKRGRWTDEEDQKLMKYIEENGEGSWRSMPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT +EE +IIKLH+T+GNRWS+IA+ LPGRTDNEIKNYWNSHLSR+IHT R
Sbjct: 61  LRSDLRRGNITPEEEEIIIKLHATMGNRWSMIAAQLPGRTDNEIKNYWNSHLSRKIHTFR 120

Query: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRS 152
           R +G D+G + + ++  ++PP+R+G R  RS
Sbjct: 121 RFNGEDNGKIFISLSHTNMPPKRRGGRTSRS 151

[Close]

BLAST of CmaCh01G002960 vs. TrEMBL
Match: A0A142D8G0_9CARY (Myb transcription factor 4 OS=Silene littorea PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.8e-61
Identity = 145/329 (44.07%), Postives = 187/329 (56.84%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGL++GRWT EEDD+L  YIL +GEG WRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLRRGRWTTEEDDKLVNYILQHGEGCWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNI+  EE+LII+LH+TLGNRWS IA+ LPGRTDNEIKNYWNSHLSR+IHTIR
Sbjct: 61  LRSDLKRGNISPQEEDLIIRLHATLGNRWSTIAAQLPGRTDNEIKNYWNSHLSRRIHTIR 120

Query: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAALAVETETETETAAREKTVYGAVDDP 180
           R +G  D   +++++ +S PP+R+G  GRRS+ A    +T                + D 
Sbjct: 121 RPNGEKD---VINLSNVSAPPKRRG--GRRSRAAMQRNKTNNNP-----------IISDN 180

Query: 181 AEERVSSNDGIISKTTDVG------------GSATLSFDND------DMSLDLDAFLDWD 240
           +    ++N+   +  TDVG                L FD +      D  + LD  L   
Sbjct: 181 SNTNTNTNNN--NNNTDVGPEFGPTFEDNLVRDVNLMFDQEQELLGIDDVIGLDGLLSTK 240

Query: 241 NDND--DDDIKVT-----------------AATGGAEVETGGECSSISCSFRLDSPWNWE 293
           N++   D+D+  T                  + GG    T    S++SC   +D   +W 
Sbjct: 241 NEDTFVDNDMGPTDGPKEQYSGLAHGSNSIESNGGGSTSTSSSPSTLSCFDHIDGGMDWN 300

[Close]

BLAST of CmaCh01G002960 vs. TrEMBL
Match: O24579_MAIZE (P protein OS=Zea mays GN=P1 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.7e-60
Identity = 124/214 (57.94%), Postives = 151/214 (70.56%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGLK+GRWTAEED  L  YI  +GEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR D+ RGNI+ +EE++IIKLH+TLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT R
Sbjct: 61  LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120

Query: 121 RR--SGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAALAVET--------ETETETAA 180
           R+  +G DD ++ +D+++L    RR+G R  GR  K +A   +         E +   AA
Sbjct: 121 RKYTAGPDDTAIAIDMSKLQSADRRRGGRTPGRPPKASASRTKQADADQPGGEAKGPAAA 180

Query: 181 REKTVYGAVDDPAEERVSSNDGIISKTTDVGGSA 203
                +  V +P   + +S+ G      + G S+
Sbjct: 181 ASSPRHSDVVNPGPNQPNSSSGSTGTAEEEGPSS 214

[Close]

BLAST of CmaCh01G002960 vs. TrEMBL
Match: A0A151SNJ7_CAJCA (Transcription factor MYB12 OS=Cajanus cajan GN=KK1_002559 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.9e-60
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGLKKGRWT EED+ L KYI ANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLKKGRWTTEEDEILSKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT +EEN I+KLHS+ GNRWSLIASHLPGRTDNEIKNYWNSHLSR+I++  
Sbjct: 61  LRADLKRGNITAEEENTIVKLHSSFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFP 120

Query: 121 RRSGNDDGSVIVDVARLS--LPPRRKGSRGRRSKEAALAVETETETETAAR 170
           +++    G+V++D A+ +  +PP+RKG  GR S+ A    ++ T+ +T  R
Sbjct: 121 KQA----GAVVMDTAKAATLIPPKRKG--GRTSRWAMKRNKSYTQNDTPQR 165

[Close]

BLAST of CmaCh01G002960 vs. TrEMBL
Match: Q9FR09_MAIZE (Myb-like transcription factor OS=Zea mays GN=P2 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60
Identity = 124/212 (58.49%), Postives = 151/212 (71.23%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGLK+GRWTAEED  L  YI  +GEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR D+ RGNI+ +EE++IIKLH+TLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT R
Sbjct: 61  LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120

Query: 121 RR--SGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAAL------AVETETETETAARE 180
           R+  +G DD ++ +D+++L    RR+G R  GR  K +A       A +   E + AA  
Sbjct: 121 RKYTAGPDDTAIAIDMSKLQSADRRRGGRTPGRPPKTSASRTKHSDADQPGGEAKGAAAS 180

Query: 181 KTVYGAVDDPAEERVSSNDGIISKTTDVGGSA 203
              +    +P   + +S+ G      + G S+
Sbjct: 181 SPRHSDAVNPGPNQPNSSSGSTGTAEEEGPSS 212

[Close]

BLAST of CmaCh01G002960 vs. TAIR10
Match: AT5G49330.1 (AT5G49330.1 myb domain protein 111)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58
Identity = 102/134 (76.12%), Postives = 114/134 (85.07%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK+GLK+GRWTAEED+ L KYI  NGEGSWRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT+DEE +I+KLHS LGNRWSLIA+HLPGRTDNEIKNYWNSHLSR+I+   
Sbjct: 61  LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT 120

Query: 121 RRSGNDDGSVIVDV 135
             SG+    ++ DV
Sbjct: 121 AVSGDGHNLLVNDV 134

[Close]

BLAST of CmaCh01G002960 vs. TAIR10
Match: AT2G47460.1 (AT2G47460.1 myb domain protein 12)

HSP 1 Score: 222.2 bits (565), Expect = 4.1e-58
Identity = 125/239 (52.30%), Postives = 149/239 (62.34%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVG+K+GRWTAEED  L  YI +NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT-I 120
           LR DL RGNIT +EE L++KLHSTLGNRWSLIA HLPGRTDNEIKNYWNSHLSR++H  I
Sbjct: 61  LRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFI 120

Query: 121 RRRSGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAALAVETETETETAAREKT----- 180
           R+ S + D S ++     S PP  +  R  GR S+ A       T+T    +        
Sbjct: 121 RKPSISQDVSAVIMTNASSAPPPPQAKRRLGRTSRSAMKPKIHRTKTRKTKKTSAPPEPN 180

Query: 181 --VYGAVDDPAEERVSSNDGIISKTTDV-------------GGSATLSFDNDDMSLDLD 217
             V GA  +      S  +  + +  D              G +  L+FD+D + L LD
Sbjct: 181 ADVAGADKEALMVESSGAEAELGRPCDYYGDDCNKNLMSINGDNGVLTFDDDIIDLLLD 239

[Close]

BLAST of CmaCh01G002960 vs. TAIR10
Match: AT3G62610.1 (AT3G62610.1 myb domain protein 11)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-56
Identity = 104/151 (68.87%), Postives = 118/151 (78.15%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVG+KKGRWTAEED  L  YI +NGEGSWRSLPKNAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR D+ RGNIT +EE++I+KLHSTLG RWS IAS+LPGRTDNEIKNYWNSHLSR++H   
Sbjct: 61  LRSDIKRGNITPEEEDVIVKLHSTLGTRWSTIASNLPGRTDNEIKNYWNSHLSRKLHGYF 120

Query: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRS 152
           R+      +V   V     PP+R+  R  RS
Sbjct: 121 RKP-----TVANTVENAPPPPKRRPGRTSRS 146

[Close]

BLAST of CmaCh01G002960 vs. TAIR10
Match: AT2G16720.1 (AT2G16720.1 myb domain protein 7)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48
Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK  + KG WT EED+RL  YI ++GEG WRSLP+ AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 117
           LR DL RGN T DE+ LIIKLHS LGN+WSLIA+ LPGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh01G002960 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4)

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 86/116 (74.14%), Postives = 95/116 (81.90%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK    KG WT EED+RL  YI A+GEG WRSLPK AGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 117
           LR DL RGN T +E+ LIIKLHS LGN+WSLIA  LPGRTDNEIKNYWN+H+ R++
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116

[Close]

BLAST of CmaCh01G002960 vs. NCBI nr
Match: gi|659108626|ref|XP_008454301.1| (PREDICTED: myb-related protein 308-like [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 4.2e-97
Identity = 211/329 (64.13%), Postives = 234/329 (71.12%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGRRPCC+KVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRRPCCDKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT++EE++IIKLH++LGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI TIR
Sbjct: 61  LRADLKRGNITSEEEDVIIKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIQTIR 120

Query: 121 RRSGNDDG-SVIVDVARLSLPPRRKGSRGRRSKEAALA-VETETETE------TAAREKT 180
           RR  NDDG SVIVDVAR+SLPPRRKG RGRR KE A   VE E E E      + A    
Sbjct: 121 RR--NDDGDSVIVDVARISLPPRRKGGRGRRRKEEAEGEVEVEVEVEVGREIPSPASGVC 180

Query: 181 VYGAVDDPAEERVSSN--DGIISKTTDVGGSATLSFDN-----DDMSLDLDAFL-----D 240
             G VDD  EE   +   +G      DVGGS TL++ N     D+MSLDLD  L     +
Sbjct: 181 GRGCVDDLREEETINKWPEG----RHDVGGSETLNYSNDVLEEDEMSLDLDELLTNVEVE 240

Query: 241 WDNDNDDD--------------DIKVTAATGGAEVETGGECSSI-SCSFRLDSPWNWESF 295
           WD D +D+              D    A  G AE+E GG+CS I S SF L+SPWNWESF
Sbjct: 241 WDEDYEDEIHKFNTTGTCGSNTDNVSVAPAGAAEMELGGDCSPISSSSFSLNSPWNWESF 300

[Close]

BLAST of CmaCh01G002960 vs. NCBI nr
Match: gi|778689398|ref|XP_004152356.2| (PREDICTED: myb-related protein P-like [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 5.7e-94
Identity = 204/322 (63.35%), Postives = 228/322 (70.81%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGRRPCC+KVGLKKGRWT EEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRRPCCDKVGLKKGRWTEEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT++EE++IIKLH++LGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI T R
Sbjct: 61  LRADLKRGNITSEEEDVIIKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIQTFR 120

Query: 121 RRSGNDDG-SVIVDVARLSLPPRRKGSRGRRSKEAALAVETETETETAAREKTVYGAVDD 180
           RR  NDDG SVIVDVAR++LPPRRKG RGRR KE +  + +   +E         G VD+
Sbjct: 121 RR--NDDGDSVIVDVARINLPPRRKGGRGRRRKEES-EIPSPLTSEMERESGGCGGCVDE 180

Query: 181 PAEERVSSNDGIISKTT----DVGGSATLSFDN-----DDMSLDLDAFLDWDNDNDDDDI 240
             EE       II KT     DVGGS T++ +N     D+MSLDLD  L    D +D+  
Sbjct: 181 VREEE------IIKKTPEGRHDVGGSVTVNLNNDVWEEDEMSLDLDELLTSVEDYEDEIH 240

Query: 241 K-VTAAT----------GGAEVETGGECSSISCS--FRLDSPWNWESFVDGEEWETGEDL 295
           K +T  T            AE+E GGECSSIS S    LDSPWNWESF    EW+ GED 
Sbjct: 241 KFITTGTCKSNTDHVSIAPAEMEVGGECSSISSSSLMSLDSPWNWESFAGDIEWDAGEDF 300

[Close]

BLAST of CmaCh01G002960 vs. NCBI nr
Match: gi|733213852|ref|NP_001289993.1| (transcription factor MYB12 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 246.1 bits (627), Expect = 7.5e-62
Identity = 108/151 (71.52%), Postives = 129/151 (85.43%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEK+GLK+GRWT EED +L KYI  NGEGSWRS+PKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKIGLKRGRWTDEEDQKLMKYIEENGEGSWRSMPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNIT +EE +IIKLH+T+GNRWS+IA+ LPGRTDNEIKNYWNSHLSR+IHT R
Sbjct: 61  LRSDLRRGNITPEEEEIIIKLHATMGNRWSMIAAQLPGRTDNEIKNYWNSHLSRKIHTFR 120

Query: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRS 152
           R +G D+G + + ++  ++PP+R+G R  RS
Sbjct: 121 RFNGEDNGKIFISLSHTNMPPKRRGGRTSRS 151

[Close]

BLAST of CmaCh01G002960 vs. NCBI nr
Match: gi|1005743107|gb|AMQ23629.1| (myb transcription factor 4 [Silene littorea])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 145/329 (44.07%), Postives = 187/329 (56.84%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGL++GRWT EEDD+L  YIL +GEG WRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLRRGRWTTEEDDKLVNYILQHGEGCWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR DL RGNI+  EE+LII+LH+TLGNRWS IA+ LPGRTDNEIKNYWNSHLSR+IHTIR
Sbjct: 61  LRSDLKRGNISPQEEDLIIRLHATLGNRWSTIAAQLPGRTDNEIKNYWNSHLSRRIHTIR 120

Query: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAALAVETETETETAAREKTVYGAVDDP 180
           R +G  D   +++++ +S PP+R+G  GRRS+ A    +T                + D 
Sbjct: 121 RPNGEKD---VINLSNVSAPPKRRG--GRRSRAAMQRNKTNNNP-----------IISDN 180

Query: 181 AEERVSSNDGIISKTTDVG------------GSATLSFDND------DMSLDLDAFLDWD 240
           +    ++N+   +  TDVG                L FD +      D  + LD  L   
Sbjct: 181 SNTNTNTNNN--NNNTDVGPEFGPTFEDNLVRDVNLMFDQEQELLGIDDVIGLDGLLSTK 240

Query: 241 NDND--DDDIKVT-----------------AATGGAEVETGGECSSISCSFRLDSPWNWE 293
           N++   D+D+  T                  + GG    T    S++SC   +D   +W 
Sbjct: 241 NEDTFVDNDMGPTDGPKEQYSGLAHGSNSIESNGGGSTSTSSSPSTLSCFDHIDGGMDWN 300

[Close]

BLAST of CmaCh01G002960 vs. NCBI nr
Match: gi|618857433|ref|NP_001278607.1| (myb-related protein P [Zea mays])

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-60
Identity = 124/214 (57.94%), Postives = 151/214 (70.56%), Query Frame = 1


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60
           MGR PCCEKVGLK+GRWTAEED  L  YI  +GEGSWRSLPKNAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120
           LR D+ RGNI+ +EE++IIKLH+TLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT R
Sbjct: 61  LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYR 120

Query: 121 RR--SGNDDGSVIVDVARLSLPPRRKGSR--GRRSKEAALAVET--------ETETETAA 180
           R+  +G DD ++ +D+++L    RR+G R  GR  K +A   +         E +   AA
Sbjct: 121 RKYTAGPDDTAIAIDMSKLQSADRRRGGRTPGRPPKASASRTKQADADQPGGEAKGPAAA 180

Query: 181 REKTVYGAVDDPAEERVSSNDGIISKTTDVGGSA 203
                +  V +P   + +S+ G      + G S+
Sbjct: 181 ASSPRHSDVVNPGPNQPNSSSGSTGTAEEEGPSS 214

The following BLAST results are available for this feature:

BLAST of CmaCh01G002960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYBP_MAIZE	3.4e-62	57.94	Myb-related protein P OS=Zea mays GN=P PE=2 SV=1	[more]
MYB12_ARATH	7.3e-57	52.30	Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1	[more]
MYB1_HORVU	6.2e-48	60.74	Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1	[more]
MYB08_ANTMA	1.0e-47	50.23	Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1	[more]
MYB38_MAIZE	1.4e-47	73.28	Myb-related protein Zm38 OS=Zea mays PE=2 SV=1	[more]

BLAST of CmaCh01G002960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A096ZXF2_BETVU	5.2e-62	71.52	R2R3-MYB flavonol regulator OS=Beta vulgaris subsp. vulgaris GN=MYB12 PE=2 SV=1	[more]
A0A142D8G0_9CARY	9.8e-61	44.07	Myb transcription factor 4 OS=Silene littorea PE=2 SV=1	[more]
O24579_MAIZE	3.7e-60	57.94	P protein OS=Zea mays GN=P1 PE=2 SV=1	[more]
A0A151SNJ7_CAJCA	4.9e-60	68.42	Transcription factor MYB12 OS=Cajanus cajan GN=KK1_002559 PE=4 SV=1	[more]
Q9FR09_MAIZE	6.4e-60	58.49	Myb-like transcription factor OS=Zea mays GN=P2 PE=4 SV=1	[more]

BLAST of CmaCh01G002960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49330.1	1.1e-58	76.12	myb domain protein 111	[more]
AT2G47460.1	4.1e-58	52.30	myb domain protein 12	[more]
AT3G62610.1	1.3e-56	68.87	myb domain protein 11	[more]
AT2G16720.1	1.0e-48	73.28	myb domain protein 7	[more]
AT4G38620.1	1.3e-48	74.14	myb domain protein 4	[more]

BLAST of CmaCh01G002960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108626\|ref\|XP_008454301.1\|	4.2e-97	64.13	PREDICTED: myb-related protein 308-like [Cucumis melo]	[more]
gi\|778689398\|ref\|XP_004152356.2\|	5.7e-94	63.35	PREDICTED: myb-related protein P-like [Cucumis sativus]	[more]
gi\|733213852\|ref\|NP_001289993.1\|	7.5e-62	71.52	transcription factor MYB12 [Beta vulgaris subsp. vulgaris]	[more]
gi\|1005743107\|gb\|AMQ23629.1\|	1.4e-60	44.07	myb transcription factor 4 [Silene littorea]	[more]
gi\|618857433\|ref\|NP_001278607.1\|	5.4e-60	57.94	myb-related protein P [Zea mays]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G002960.1	CmaCh01G002960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 67..112 score: 1.6E-15coord: 14..61 score: 9.8
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 score: 1.0E-10coord: 66..114 score: 1.2
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 65..116 score: 6.8E-24coord: 5..64 score: 3.3
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 11..108 score: 1.35
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 62..116 score: 23.656coord: 9..61 score: 16
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 246..277 score: 2.8E-100coord: 1..119 score: 2.8E-100coord: 143..196 score: 2.8E
None	No IPR available	PANTHER	PTHR10641:SF595	MYB TRANSCRIPTION FACTOR	coord: 246..277 score: 2.8E-100coord: 143..196 score: 2.8E-100coord: 1..119 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G002960	Cucsa.096800	Cucumber (Gy14) v1	cgycmaB0199
CmaCh01G002960	Cla017373	Watermelon (97103) v1	cmawmB416
CmaCh01G002960	ClCG10G011260	Watermelon (Charleston Gray)	cmawcgB387
CmaCh01G002960	CSPI04G01150	Wild cucumber (PI 183967)	cmacpiB478
CmaCh01G002960	CmoCh14G009510	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G002960	Lsi03G011010	Bottle gourd (USVL1VR-Ls)	cmalsiB422
CmaCh01G002960	MELO3C017925.2	Melon (DHL92) v3.6.1	cmamedB501
CmaCh01G002960	CsaV3_4G001130	Cucumber (Chinese Long) v3	cmacucB0567
CmaCh01G002960	Cla97C10G194150	Watermelon (97103) v2	cmawmbB445
CmaCh01G002960	Bhi11G001051	Wax gourd	cmawgoB0553

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G002960	CmaCh14G009250	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G002960	Cucumber (Gy14) v2	cgybcmaB366
CmaCh01G002960	Cucumber (Gy14) v2	cgybcmaB516
CmaCh01G002960	Cucumber (Gy14) v2	cgybcmaB943
CmaCh01G002960	Melon (DHL92) v3.6.1	cmamedB459
CmaCh01G002960	Silver-seed gourd	carcmaB0143
CmaCh01G002960	Silver-seed gourd	carcmaB1059
CmaCh01G002960	Silver-seed gourd	carcmaB1134
CmaCh01G002960	Cucumber (Chinese Long) v3	cmacucB0545
CmaCh01G002960	Cucumber (Chinese Long) v3	cmacucB0595
CmaCh01G002960	Watermelon (97103) v2	cmawmbB512
CmaCh01G002960	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh01G002960	Cucurbita maxima (Rimu)	cmacmaB440
CmaCh01G002960	Cucumber (Gy14) v1	cgycmaB0559
CmaCh01G002960	Cucumber (Gy14) v1	cgycmaB0607
CmaCh01G002960	Cucurbita moschata (Rifu)	cmacmoB466
CmaCh01G002960	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G002960	Cucurbita moschata (Rifu)	cmacmoB490
CmaCh01G002960	Wild cucumber (PI 183967)	cmacpiB456
CmaCh01G002960	Wild cucumber (PI 183967)	cmacpiB502
CmaCh01G002960	Cucumber (Chinese Long) v2	cmacuB453
CmaCh01G002960	Cucumber (Chinese Long) v2	cmacuB475
CmaCh01G002960	Cucumber (Chinese Long) v2	cmacuB496
CmaCh01G002960	Melon (DHL92) v3.5.1	cmameB398
CmaCh01G002960	Melon (DHL92) v3.5.1	cmameB434
CmaCh01G002960	Watermelon (Charleston Gray)	cmawcgB377
CmaCh01G002960	Watermelon (97103) v1	cmawmB407
CmaCh01G002960	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G002960	Cucurbita pepo (Zucchini)	cmacpeB465
CmaCh01G002960	Cucurbita pepo (Zucchini)	cmacpeB472
CmaCh01G002960	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G002960	Bottle gourd (USVL1VR-Ls)	cmalsiB420