Cla97C08G147720 (gene) Watermelon (97103) v2

Overview
NameCla97C08G147720
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr08 : 13881206 .. 13881668 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCTTAGAAGACGGATGGCTCGTAGGAGCTCATCACTCTGTTCATGAACGTACCGACAGAGGCTTCCAGAAATCGAATTCCGAATTTGGAATCATACCAGGATCAAAATCAGCTGCCCACCGTCTCAGAATCTTCGTTTGATTCTATTGCTTTTTTAGCTCAATCTGCGCTGACTTTTGTTCTACGTGTTCCTGCTGCTTCATTCACGAGTGTCCCACGTTCTTGCCACTCCAAAACGCCACAGAACTTCAGGTTTGTTTTTTTTTTTTTTTTTTCCTTCCCATTTGAGGTTATTTCATTTCATCGGATTAGCTGAAGGCGTTCATTTAGGTTGTTATTGGCATGTATATGTATTGAATGAATTTTGATTGTGTTTTTTCATTGAATTTTGGAGTAGACCTATGGGAGAGTAAGAGAGATTGATGTGAAGTGGAAGATGGATACGGCGTGGTCATGA

mRNA sequence

ATGAATGCCTTAGAAGACGGATGGCTCGTAGGAGCTCATCACTCTGTTCATGAACGTACCGACAGAGGCTTCCAGAAATCGAATTCCGAATTTGGAATCATACCAGGATCAAAATCAGCTGCCCACCGTCTCAGAATCTTCACCTATGGGAGAGTAAGAGAGATTGATGTGAAGTGGAAGATGGATACGGCGTGGTCATGA

Coding sequence (CDS)

ATGAATGCCTTAGAAGACGGATGGCTCGTAGGAGCTCATCACTCTGTTCATGAACGTACCGACAGAGGCTTCCAGAAATCGAATTCCGAATTTGGAATCATACCAGGATCAAAATCAGCTGCCCACCGTCTCAGAATCTTCACCTATGGGAGAGTAAGAGAGATTGATGTGAAGTGGAAGATGGATACGGCGTGGTCATGA

Protein sequence

MNALEDGWLVGAHHSVHERTDRGFQKSNSEFGIIPGSKSAAHRLRIFTYGRVREIDVKWKMDTAWS
Homology
[Close]
BLAST of Cla97C08G147720 vs. NCBI nr
Match: KGN46004.1 (hypothetical protein Csa_6G042380 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-04
Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 9  LVGAHHSVHERTDRGFQKSNSEFGIIPGSKSAAHRLRI 47
          +V    SVHER D  FQKSNSEF II GSKSAAHRLRI
Sbjct: 14 MVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRI 51

[Close]
BLAST of Cla97C08G147720 vs. TrEMBL
Match: tr|A0A0A0KB15|A0A0A0KB15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042380 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04
Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 9  LVGAHHSVHERTDRGFQKSNSEFGIIPGSKSAAHRLRI 47
          +V    SVHER D  FQKSNSEF II GSKSAAHRLRI
Sbjct: 14 MVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRI 51

The following BLAST results are available for this feature:
BLAST of Cla97C08G147720 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46004.12.4e-0473.68hypothetical protein Csa_6G042380 [Cucumis sativus][more]
BLAST of Cla97C08G147720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KB15|A0A0A0KB15_CUCSA1.6e-0473.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042380 PE=4 SV=1[more]
BLAST of Cla97C08G147720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G147720 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G147720.1Cla97C08G147720.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G147720Cucumber (Chinese Long) v2cuwmbB493
Cla97C08G147720Bottle gourd (USVL1VR-Ls)lsiwmbB445
Cla97C08G147720Melon (DHL92) v3.6.1medwmbB300
Cla97C08G147720Melon (DHL92) v3.5.1mewmbB311
Cla97C08G147720Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G147720Wax gourdwgowmbB332
Cla97C08G147720Silver-seed gourdcarwmbB0083
Cla97C08G147720Cucumber (Gy14) v2cgybwmbB469
Cla97C08G147720Cucumber (Gy14) v1cgywmbB632
Cla97C08G147720Cucurbita maxima (Rimu)cmawmbB932
Cla97C08G147720Cucurbita moschata (Rifu)cmowmbB909
Cla97C08G147720Wild cucumber (PI 183967)cpiwmbB519
Cla97C08G147720Cucumber (Chinese Long) v3cucwmbB511