Cla97C02G039190 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G039190
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	60S ribosomal protein L35-like
Location	Cla97Chr02 : 26917247 .. 26918481 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAAATCTCACGAACTTCGCTTAACTGAAGCTTTCTCTTCATAATTTCTCCGTCGTTGAGCAACATTGATCGCTTCATGATTGATTTTGTCTTAGTTTTCTTTCTCTCTTCTGCTTTAAAATTTATATGGTCGGTTTTCTTGATTGAGTGCAGCGAGAATTAAGGTTCATGAGCTTAGACAGAAGTCGAAGGGGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTCTCCAAAATGTACATTCGTTTATCTTTCTATTGATTCTCTTCTTCTTTGTATGTTTTCGTATGTATGTTGATTGTTGTTCTTTTGGGTTTTTGCTGTGATGTTTATTGGGTTTGTTTTGGTGGTTCTTCACTGCAGTAAGGTAGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAATCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGTAAGAGCTTTCTTCATTTGAAATTGCATATTAGTATATATTCCTTTCCCTTTTGTTGTATTTGTCTGTTTGCTTAAATTTCTGCTATGTATTTGATTCATTATCAATGTATTTGTGCACGTTTCTGAATAATCTATGAATTTGCTTTCCCCGTTGAATGGTTAAGGATTCTACTGTGTGGTATAATTTTATTGTTAATATTGTATTTCCCGTTGAAGCTTCGTGTAGTATTTGGTCATTTTCGCCATTTATTGGGCTCTTCGTTTCCTGAGATTGTTGAGCCACTGCATTTTAGAAGTTAAAGGAGACTTCTTTTTATTAGAAAGAAAAAACAGTATCAAACGGAATGATTCTCCAAGTATTGGAAGCCTTCTACATAGTTTCAATGTCTTAATGCTGTGAACAAAATTCTGTTTCATGCCTTATCTAGAATGTGCATATAACATATCTGAGATATCTCTTTATGGTAATGAATATTTGGGTTGATTGGAATCCTGTATTTGTTGTATTGAAATACTGCAAGAAGTGTAGGTCGGCATTTTTCCTTTTTGTGATTCGGCATTCATGTATTGTGTATTACAGGCATCACTAAAGACGGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAATATGCCATCAAGGTGTAG

mRNA sequence

ATGGCGAGAATTAAGGTTCATGAGCTTAGACAGAAGTCGAAGGGGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTCTCCAAAATTAAGGTAGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAATCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCACTAAAGACGGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAATATGCCATCAAGGTGTAG

Coding sequence (CDS)

ATGGCGAGAATTAAGGTTCATGAGCTTAGACAGAAGTCGAAGGGGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTCTCCAAAATTAAGGTAGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAATCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCACTAAAGACGGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAATATGCCATCAAGGTGTAG

Protein sequence

MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV

Homology

[Close]

BLAST of Cla97C02G039190 vs. NCBI nr
Match: XP_004150961.1 (PREDICTED: 60S ribosomal protein L35 [Cucumis sativus] >KGN50505.1 hypothetical protein Csa_5G178720 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 4.0e-53
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. NCBI nr
Match: XP_008461617.1 (PREDICTED: 60S ribosomal protein L35-like [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ SLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. NCBI nr
Match: XP_022134532.1 (60S ribosomal protein L35 [Momordica charantia])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. NCBI nr
Match: XP_022939961.1 (60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal protein L35 [Cucurbita moschata] >XP_022991739.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_022993735.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_023523288.1 60S ribosomal protein L35 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 2.6e-52
Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. NCBI nr
Match: XP_022139337.1 (60S ribosomal protein L35-2 [Momordica charantia])

HSP 1 Score: 213.8 bits (543), Expect = 3.4e-52
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TrEMBL
Match: tr|A0A0A0KLK6|A0A0A0KLK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G178720 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-53
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TrEMBL
Match: tr|A0A1S3CF13|A0A1S3CF13_CUCME (60S ribosomal protein L35-like OS=Cucumis melo OX=3656 GN=LOC103500179 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ SLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TrEMBL
Match: tr|A0A0A0KQT2|A0A0A0KQT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TrEMBL
Match: tr|A0A1S3CJH2|A0A1S3CJH2_CUCME (60S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKE+Y+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKELYFPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TrEMBL
Match: tr|A0A1U8LTM7|A0A1U8LTM7_GOSHI (60S ribosomal protein L35-like OS=Gossypium hirsutum OX=3635 GN=LOC107930739 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKTDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKSALREAYKKKK LPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKKKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPMRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. Swiss-Prot
Match: sp|Q9M5L0|RL35_EUPES (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.3e-51
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQK+K +LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ SLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. Swiss-Prot
Match: sp|Q9SF53|RL351_ARATH (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.6e-51
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. Swiss-Prot
Match: sp|O80626|RL352_ARATH (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.6e-51
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. Swiss-Prot
Match: sp|Q9LZ41|RL354_ARATH (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-50
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. Swiss-Prot
Match: sp|Q9M3D2|RL353_ARATH (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.8e-50
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TAIR10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 5.3e-52
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TAIR10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 5.3e-52
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TAIR10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 198.4 bits (503), Expect = 2.6e-51
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Cla97C02G039190 vs. TAIR10
Match: AT5G02610.2 (Ribosomal L29 family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-47
Identity = 112/146 (76.71%), Postives = 116/146 (79.45%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSK-------------- 60
           MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSK              
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIRMDVDLAYDSNMY 60

Query: 61  ---------IKVVRLSIAQVLTVISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTK 120
                    IKVVR SIAQVLTVISQKQKSALREAYK KKLLPLDLRPKKTRAIRRRLTK
Sbjct: 61  LRSIKFGPCIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTK 120

Query: 121 HQASLKTERQKKKEMYYPLRKYAIKV 124
           HQASLKTER+KKKEMY+P+RKYAIKV
Sbjct: 121 HQASLKTEREKKKEMYFPVRKYAIKV 146

The following BLAST results are available for this feature:

BLAST of Cla97C02G039190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150961.1	4.0e-53	98.37	PREDICTED: 60S ribosomal protein L35 [Cucumis sativus] >KGN50505.1 hypothetical ...	[more]
XP_008461617.1	1.5e-52	97.56	PREDICTED: 60S ribosomal protein L35-like [Cucumis melo]	[more]
XP_022134532.1	1.5e-52	97.56	60S ribosomal protein L35 [Momordica charantia]	[more]
XP_022939961.1	2.6e-52	96.75	60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal pro...	[more]
XP_022139337.1	3.4e-52	97.56	60S ribosomal protein L35-2 [Momordica charantia]	[more]

BLAST of Cla97C02G039190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLK6\|A0A0A0KLK6_CUCSA	2.6e-53	98.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G178720 PE=3 SV=1	[more]
tr\|A0A1S3CF13\|A0A1S3CF13_CUCME	1.0e-52	97.56	60S ribosomal protein L35-like OS=Cucumis melo OX=3656 GN=LOC103500179 PE=3 SV=1	[more]
tr\|A0A0A0KQT2\|A0A0A0KQT2_CUCSA	1.1e-51	95.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1	[more]
tr\|A0A1S3CJH2\|A0A1S3CJH2_CUCME	2.5e-51	95.12	60S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1	[more]
tr\|A0A1U8LTM7\|A0A1U8LTM7_GOSHI	3.2e-51	95.12	60S ribosomal protein L35-like OS=Gossypium hirsutum OX=3635 GN=LOC107930739 PE=...	[more]

BLAST of Cla97C02G039190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M5L0\|RL35_EUPES	4.3e-51	91.06	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
sp\|Q9SF53\|RL351_ARATH	9.6e-51	91.06	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]
sp\|O80626\|RL352_ARATH	9.6e-51	91.06	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
sp\|Q9LZ41\|RL354_ARATH	2.1e-50	91.06	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
sp\|Q9M3D2\|RL353_ARATH	4.8e-50	90.24	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]

BLAST of Cla97C02G039190 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39390.1	5.3e-52	91.06	Ribosomal L29 family protein	[more]
AT3G09500.1	5.3e-52	91.06	Ribosomal L29 family protein	[more]
AT3G55170.1	2.6e-51	90.24	Ribosomal L29 family protein	[more]
AT5G02610.2	1.0e-47	76.71	Ribosomal L29 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR036049	Ribosomal_L29/L35_sf
IPR001854	Ribosomal_L29/L35

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G039190.1	Cla97C02G039190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.287.310		coord: 1..77 e-value: 9.5E-33 score: 114.4
None	No IPR available	GENE3D	G3DSA:1.10.20.90		coord: 78..123 e-value: 1.4E-23 score: 84.7
None	No IPR available	PANTHER	PTHR13872	60S RIBOSOMAL PROTEIN L35	coord: 1..123
None	No IPR available	PANTHER	PTHR13872:SF36	SUBFAMILY NOT NAMED	coord: 1..123
None	No IPR available	CDD	cd00427	Ribosomal_L29_HIP	coord: 8..64 e-value: 1.85554E-10 score: 51.7195
IPR001854	Ribosomal protein L29/L35	PFAM	PF00831	Ribosomal_L29	coord: 8..64 e-value: 2.2E-17 score: 62.7
IPR001854	Ribosomal protein L29/L35	TIGRFAM	TIGR00012	TIGR00012	coord: 8..64 e-value: 2.4E-18 score: 63.9
IPR001854	Ribosomal protein L29/L35	HAMAP	MF_00374	Ribosomal_L29	coord: 4..64 score: 12.748
IPR036049	Ribosomal protein L29/L35 superfamily	SUPERFAMILY	SSF46561	Ribosomal protein L29 (L29p)	coord: 4..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G039190	Cla020108	Watermelon (97103) v1	wmwmbB316
Cla97C02G039190	Csa5G178720	Cucumber (Chinese Long) v2	cuwmbB368
Cla97C02G039190	MELO3C023820	Melon (DHL92) v3.5.1	mewmbB053
Cla97C02G039190	ClCG02G013520	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G039190	CSPI05G09220	Wild cucumber (PI 183967)	cpiwmbB385
Cla97C02G039190	Cucsa.165680	Cucumber (Gy14) v1	cgywmbB290
Cla97C02G039190	CmaCh04G002420	Cucurbita maxima (Rimu)	cmawmbB741
Cla97C02G039190	CmoCh04G002490	Cucurbita moschata (Rifu)	cmowmbB714
Cla97C02G039190	Lsi04G008480	Bottle gourd (USVL1VR-Ls)	lsiwmbB275
Cla97C02G039190	CsGy5G006580	Cucumber (Gy14) v2	cgybwmbB351
Cla97C02G039190	MELO3C023820.2	Melon (DHL92) v3.6.1	medwmbB050
Cla97C02G039190	Carg23781	Silver-seed gourd	carwmbB0902
Cla97C02G039190	CsaV3_5G006630	Cucumber (Chinese Long) v3	cucwmbB383
Cla97C02G039190	Bhi07G000818	Wax gourd	wgowmbB526

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G039190	Watermelon (97103) v2	wmbwmbB100
Cla97C02G039190	Cucurbita maxima (Rimu)	cmawmbB740
Cla97C02G039190	Cucurbita moschata (Rifu)	cmowmbB713
Cla97C02G039190	Watermelon (97103) v1	wmwmbB289
Cla97C02G039190	Wax gourd	wgowmbB417