Cla008866 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla008866
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	ATP-dependent Clp protease proteolytic subunit (AHRD V1 ***- F6H561_VITVI); contains Interpro domain(s) IPR001907 Peptidase S14, ClpP
Location	Chr10 : 1342863 .. 1346574 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCGGCTTCATCAGTCCCCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGGTATTCATTCACGAGCTGATTTTTTGTGCATAATGTGTAGTTGGTGAAGATATGGAAATATATGATTCGGGCTCAGTTTTATTCTTTTCGAACGATTTAGGTAATTTGATTTCTATGAATATCCGGTTTATGCCTAATTTTCTGTAGAGTTTTCTTCACCTGCATCGCAAACAGTTAGGCTACTAGTTGGTGTATTCATTCTGGTTCTAGAGTTGACATTGATTAAACAAGAGATTTCTTTAATCAGTGCCTTTTTAAAGAATGGCAATGGTTGGAAGTTAAAATTTAGGAGCAGGACAAACCCCTGGCTTCATCCTTCCCGTTTAAGCTATATTTTCCAAACTTTTTCTGTATTTCCAAATGCTAAAGATTTTTCTTTAAAATTTTTTTTGGAATAGGGCAGTCTGAACTTGGAATTTTCAGCTCAGAAGGAACCCTTTGATTTGATAGAGAGCCATAAGAATGGTTGACCTTTATTCGAAAGATGGAAAGCAATCAGCTAAATATTACTATCTTAGTAAGGATAAATTTTGTTGAAAGTTTGAAACCTTTGGCTTGTATCCACTTGCAAATCTTCCTTGTATCCACTTGCAAATCTTCAAACCTCCTGCTGAATAGCAGAGAAAGCAGGTTGGCTGAACCCTTTTTATCCTCGGTTTTGGGAGGAAAAGACTTAGTTCTTCATTTGGACTATGGCTTACAAGAGCCTAAACACTTGTAATTGGATTAAAAGAAGAACCCTTCCATGGCGTTATCTCCTTCTGTTTTCCCTTCTTACCTAATGAAGAAATCCTGGACCATATTTTTATTCCATTGGCAACGCGTTGCACAAAAGATTTACTTGTGAAAACCCCATTTTATTTGTTTTAGACAAGAAACAATTTCATTGATGAAATGAGATGATATAAAAAGTAAAATCATTCAAAGAGATTACAAAAGATTTCTCCAGTCGGATATGAAAGAATTTATGCTGTATATGTTAAAAGTATCCATATTTTGACTCCTATAAAGTGCCAAAAATATAGAGGCTTATAGGACTTCGAGTAGGGCGCTTTATTTGTCTTGAAATTTTTTTTAGTTCCTTTCATTCCAAATCTTCCAAATACCTGCCCTTGGAATGAAGGACCGAAGGGTATTCTTTGTTGGCTGGCTCAGATGATTTATCTGCTGCAAAATTTGCCAATCGAAACCCATTTTCTATAAGGACCAATTTCCCAAATCATTACTCCTTTGGGAAAGGTCTAATGTTACTTCTCCTAAGCAAGTAAGCATGTTGGGCAAATCAAATACTTTTCAACAATTAAACATCGAGGCCTTCTTGTTCGTGCCCTATGACCTTCTTAGTGGCAGGTGATAAAGCATAGAGGTGGTGGAAGTTGAAGATATTACTAAAGTATGGTAGTAATGCATCTATTATCGGTCTCTCCCTTTTCCTTTATGGTATATTTTGAATAGCATGCTAGGGGTTGTGAAGAAGAATTGAGAAGTAGGAGAGTTATAGTGTCTTAACTCTTAACCCACTGAACTCAGAATGTATGTTTTCAAAACATCTACATATTAGTTATCTATTTGTATCAAGTTTTACTTTGTGCTGGATAACACTTGGTCCTACACAGTACAGATTTATCTTGAAACCACGTAATCTATATATATAACATGCAACCAATCATTTACAACTAATTTAATGCATTGGAATCAGAACTGAATATTTCTTTTCAAACTTCAATAGAGAAATGTAATGTGCTTGTGTCTATGGCTAGAGATGAGTGTATTCGTGCCCTACATTACTACATGAATAGGAAAATTAGCCAACTGTGAGAACGTATGCATATCTTCCCTGATTGTTAATTTATTTATGTTTTATTCTTGTTTCCATGGTTTGCAGGCCTTCATGTACATTAGAAAATCTTCTAGAGTAATTTAATTTAGATTTATGTGGTTCATGGATGACCTTTTCATTATCTTCTCTTCGCATCTTTTATGTACAACCACTTTCTAAATCTATCATTCACTACCAAACCATCATTTTTCTAAATGTATACTGATATGTAACTTAAGGATGCTCGTGAGACTTGAGAGGTGTCAGCAGAAGAAATTATGTACTTTTCCTAACCCAGTTCATTTGTCAGAAAATGTTATGTCCTTAAGTTCCACATCCACTTGTCCTCATGTTGATTAAGGAACACACCTTCCAACTTTCTCATAATCCAAACCCAGTCTTCCAATTGTCTATCAAACAGATTCCTTCTCAGCCCAATGTACCCTTAGTTTGGGTGTCTCAAGTAATCACTTACTACCTCTCCTTTTGTACTAGGAATAAAATAGAGTAGATATTATGAAATACCCGACTCAAAGGTGGAATCATACCACACCAGTTATTTCTTCCTGGATTTTAAGCCCATTTCCCATCTAATAAAGAAACCCTTACCCGTAGAACCCATACATTTAGCTAGATCAGGGCAGGGGCAAAAGGTAGACTAGCTTATATAGTTTTGTTTGTTTTCAGAGACCAGGACTTAAAATTTAGAAGTGGGAATGCCATATTGACTCATGAGTATATGAATTTTCTCATTGTTTATTTGAAGCTGGAAATATTGATTACTGGGCTTTTTAAATACACACATATATAATATATACACATATATACATATATACACACATATATACAGACACATATATATATTTCTGTTTTTCCTTTCCGGTCTCGAGAACTTAGATTAGGAGGATATTCAGCTTTCAACGAGTGGCACCTGATCTCATCTATTTTTGCATCATATTCATCAACATTTTGAAAGTGGATGGTCTGATTTCCTTCTATTAATGCTGTTTTCATTAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCCGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGATGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAG

mRNA sequence

ATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCGGCTTCATCAGTCCCCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCCGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGATGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAG

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCGGCTTCATCAGTCCCCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCCGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGATGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAG

Protein sequence

MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

Homology

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BLAST of Cla008866 vs. Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.7e-104
Identity = 207/302 (68.54%), Postives = 228/302 (75.50%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSV 60
           M  LS  S+L P   S  L +S    S+ FPK  +            LKP++ ++PP   
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLY----------LKPTKLISPPLRT 60

Query: 61  LMTGP-----------QTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLL 120
               P           QT ++A RGAE+D MGLL RERIVFLG+SIDDFVADAIMSQLLL
Sbjct: 61  TSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLL 120

Query: 121 LDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKG 180
           LDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKG
Sbjct: 121 LDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKG 180

Query: 181 KRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDID 240
           KR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDID
Sbjct: 181 KRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDID 240

Query: 241 RDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDE 292
           RDRYMSPIEAVEYGLIDGVID D IIPL PVP+RVK  +NYEEISKDP KFLTP++PDDE
Sbjct: 241 RDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDE 292

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BLAST of Cla008866 vs. Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 5.1e-55
Identity = 104/190 (54.74%), Postives = 139/190 (73.16%), Query Frame = 1


Query: 65  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 124
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 69

Query: 125 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 184
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 185 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 244
           PLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 245 LIDGVIDKDG 254
           LID V+D  G
Sbjct: 190 LIDRVVDSSG 199

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BLAST of Cla008866 vs. Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54
Identity = 103/190 (54.21%), Postives = 138/190 (72.63%), Query Frame = 1


Query: 65  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 124
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYV 69

Query: 125 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 184
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 185 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 244
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 245 LIDGVIDKDG 254
           LID V+D  G
Sbjct: 190 LIDRVVDSSG 199

[Close]

BLAST of Cla008866 vs. Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-53
Identity = 101/190 (53.16%), Postives = 137/190 (72.11%), Query Frame = 1


Query: 65  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 124
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 125 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 184
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GG KGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQ 146

Query: 185 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 244
           PLGGA GQA+D+EIQA+EI+  K  +  ++++ TG P +K+ +D DRD ++SP EAV+YG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYG 206

Query: 245 LIDGVIDKDG 254
           LID V+D  G
Sbjct: 207 LIDRVVDSSG 216

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BLAST of Cla008866 vs. Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-53
Identity = 102/187 (54.55%), Postives = 136/187 (72.73%), Query Frame = 1


Query: 65  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 124
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 125 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 184
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 185 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 244
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 245 LIDGVID 251
           LID V+D
Sbjct: 207 LIDRVVD 213

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BLAST of Cla008866 vs. TrEMBL
Match: A0A0A0L3S1_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 8.1e-140
Identity = 262/294 (89.12%), Postives = 272/294 (92.52%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSV---PALKPSRTLAPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSF SASSV    ALKPSRTL PP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 120
           CSV MT PQTPDAARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           EAVEYG IDGVID+D IIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEI+
Sbjct: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of Cla008866 vs. TrEMBL
Match: A0A061G8D9_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_016742 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 7.6e-114
Identity = 224/291 (76.98%), Postives = 240/291 (82.47%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSV 60
           M+LLS  S L P  SSL L   H K S   P  K   SF   +  P     +    P  +
Sbjct: 1   MDLLSLSSPLTPSLSSLQLKLKH-KTSFTSPNPKP--SFLCLTPTPVSSSVKVKTTPKCL 60

Query: 61  LMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIR 120
            ++ PQ+P  A RGAETDAMGLL RERIVFLGN+IDDFVADAI+SQLLLLDAQD  KDIR
Sbjct: 61  QLSAPQSPATAMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIR 120

Query: 121 LFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIM 180
           LFINS GGSLSATMAIYDVVQLVRADVST+ALGIAASTASIILGGGTKGKRLAMPN RIM
Sbjct: 121 LFINSPGGSLSATMAIYDVVQLVRADVSTVALGIAASTASIILGGGTKGKRLAMPNTRIM 180

Query: 181 VHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAV 240
           +HQPLGGASGQAIDVEIQA+EIMHNKNNVTRIIS FTG  FE+VQKDIDRDRYMSPIEAV
Sbjct: 181 IHQPLGGASGQAIDVEIQAQEIMHNKNNVTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 240

Query: 241 EYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           EYG+IDGVID+D IIPL PVPERVKASLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 EYGIIDGVIDRDSIIPLAPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cla008866 vs. TrEMBL
Match: A0A0D2R6I8_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_004G175000 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 4.2e-112
Identity = 225/292 (77.05%), Postives = 242/292 (82.88%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSV 60
           M LLS  S+L P  SSL L   H K S  FP    +   S+ +S P L  S  L P  + 
Sbjct: 1   MGLLSLSSSLTPSFSSLHLKPKH-KLSLTFPN--PSFVCSAPTSTP-LSSSLKLKPTANS 60

Query: 61  L-MTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDI 120
           L ++ PQ+P  A RGAE DAMGLL RERIVFLGN+IDDFVADAI+SQLLLLDAQD TKDI
Sbjct: 61  LKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 120

Query: 121 RLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARI 180
           RLFINS GGSLSATMAIYDVVQLVRADVST+ +GIAASTASIILGGGTKGKR AMPN RI
Sbjct: 121 RLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFAMPNTRI 180

Query: 181 MVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEA 240
           M+HQPLGGASGQAIDVEIQAREIMHNKNNVTRIIS  TG PFE+V KDIDRDRYMSPIEA
Sbjct: 181 MIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRYMSPIEA 240

Query: 241 VEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           VEYG+IDGVID+D IIPL PVPERVKASLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 VEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cla008866 vs. TrEMBL
Match: A0A059CBQ6_EUCGR (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_D00191 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.0e-111
Identity = 208/256 (81.25%), Postives = 226/256 (88.28%), Query Frame = 1


Query: 37  LSFSSASSVPALKPSRTLAPPCS-VLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSI 96
           LS       P+LKP    AP  + VL   PQ P  A RGAE DAMGLL RERIVFLG+ I
Sbjct: 90  LSSLKTHLAPSLKPRPAAAPAAAAVLSAAPQDPATAMRGAEADAMGLLLRERIVFLGSGI 149

Query: 97  DDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIA 156
           DDFVADAI+SQLLLLDAQD TKDIRLF+NS GGSLSATMAIYDVVQLVRADVST+ALGI+
Sbjct: 150 DDFVADAIISQLLLLDAQDHTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGIS 209

Query: 157 ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISE 216
           ASTASIILGGGTKGKRLAMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNK+NVTRIIS 
Sbjct: 210 ASTASIILGGGTKGKRLAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKSNVTRIISS 269

Query: 217 FTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISK 276
           FTG PFE+V+KDIDRDRYMSPIEAVEYG+IDGVID+D IIPLMPVPERVK++LNYEEISK
Sbjct: 270 FTGRPFEQVEKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLMPVPERVKSTLNYEEISK 329

Query: 277 DPRKFLTPDVPDDEIY 292
           DPRKFLTPD+PDDEIY
Sbjct: 330 DPRKFLTPDIPDDEIY 345

[Close]

BLAST of Cla008866 vs. TrEMBL
Match: A0A0B0PZ48_GOSAR (ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_15783 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 7.9e-111
Identity = 224/298 (75.17%), Postives = 240/298 (80.54%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF---SSASSVPALKP---SRTL 60
           M LLS  S+L P   SL L           PK K +L+F   S A S P  KP   S  L
Sbjct: 1   MGLLSLSSSLTPSFPSLHLK----------PKHKLSLTFPNPSFACSAPTSKPLSSSLKL 60

Query: 61  APPCSVL-MTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQ 120
            P  + L  + PQ+P  A RGAE DAMGLL RERIVFLGN+IDDF ADAI+SQLLLLDAQ
Sbjct: 61  KPTANSLKFSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFAADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLA 180
           D TKDIRLFINS GGSLSATMAIYDVVQLVRADVST+ +GIAASTASIILGGGTKGKR A
Sbjct: 121 DPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFA 180

Query: 181 MPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRY 240
           MPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNNVTRIIS  TG PFE+V KDIDRDRY
Sbjct: 181 MPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRY 240

Query: 241 MSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           MSPIEA+EYG+IDGVID+D IIPL PVPERVKASLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 MSPIEALEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cla008866 vs. NCBI nr
Match: gi|659095454|ref|XP_008448589.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 1.4e-148
Identity = 278/294 (94.56%), Postives = 284/294 (96.60%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSV---PALKPSRTLAPP 60
           MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF SASSV    ALKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 120
           CSV MT PQTPDA+RRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           EAVEYGLIDGVID+D IIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Cla008866 vs. NCBI nr
Match: gi|449456777|ref|XP_004146125.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-139
Identity = 262/294 (89.12%), Postives = 272/294 (92.52%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSV---PALKPSRTLAPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSF SASSV    ALKPSRTL PP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 120
           CSV MT PQTPDAARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           EAVEYG IDGVID+D IIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEI+
Sbjct: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of Cla008866 vs. NCBI nr
Match: gi|590680694|ref|XP_007040931.1| (ATP-dependent Clp protease proteolytic subunit 4 [Theobroma cacao])

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 224/291 (76.98%), Postives = 240/291 (82.47%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSV 60
           M+LLS  S L P  SSL L   H K S   P  K   SF   +  P     +    P  +
Sbjct: 1   MDLLSLSSPLTPSLSSLQLKLKH-KTSFTSPNPKP--SFLCLTPTPVSSSVKVKTTPKCL 60

Query: 61  LMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIR 120
            ++ PQ+P  A RGAETDAMGLL RERIVFLGN+IDDFVADAI+SQLLLLDAQD  KDIR
Sbjct: 61  QLSAPQSPATAMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPNKDIR 120

Query: 121 LFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIM 180
           LFINS GGSLSATMAIYDVVQLVRADVST+ALGIAASTASIILGGGTKGKRLAMPN RIM
Sbjct: 121 LFINSPGGSLSATMAIYDVVQLVRADVSTVALGIAASTASIILGGGTKGKRLAMPNTRIM 180

Query: 181 VHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAV 240
           +HQPLGGASGQAIDVEIQA+EIMHNKNNVTRIIS FTG  FE+VQKDIDRDRYMSPIEAV
Sbjct: 181 IHQPLGGASGQAIDVEIQAQEIMHNKNNVTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 240

Query: 241 EYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           EYG+IDGVID+D IIPL PVPERVKASLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 EYGIIDGVIDRDSIIPLAPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cla008866 vs. NCBI nr
Match: gi|823151327|ref|XP_012475491.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Gossypium raimondii])

HSP 1 Score: 412.5 bits (1059), Expect = 6.0e-112
Identity = 225/292 (77.05%), Postives = 242/292 (82.88%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVPALKPSRTLAPPCSV 60
           M LLS  S+L P  SSL L   H K S  FP    +   S+ +S P L  S  L P  + 
Sbjct: 1   MGLLSLSSSLTPSFSSLHLKPKH-KLSLTFPN--PSFVCSAPTSTP-LSSSLKLKPTANS 60

Query: 61  L-MTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDI 120
           L ++ PQ+P  A RGAE DAMGLL RERIVFLGN+IDDFVADAI+SQLLLLDAQD TKDI
Sbjct: 61  LKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 120

Query: 121 RLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARI 180
           RLFINS GGSLSATMAIYDVVQLVRADVST+ +GIAASTASIILGGGTKGKR AMPN RI
Sbjct: 121 RLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFAMPNTRI 180

Query: 181 MVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEA 240
           M+HQPLGGASGQAIDVEIQAREIMHNKNNVTRIIS  TG PFE+V KDIDRDRYMSPIEA
Sbjct: 181 MIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRYMSPIEA 240

Query: 241 VEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 292
           VEYG+IDGVID+D IIPL PVPERVKASLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 VEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cla008866 vs. NCBI nr
Match: gi|1012124170|ref|XP_015963188.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Arachis duranensis])

HSP 1 Score: 410.6 bits (1054), Expect = 2.3e-111
Identity = 222/311 (71.38%), Postives = 247/311 (79.42%), Query Frame = 1


Query: 1   MELLSRCSTLIPQASSLGL------------PNSHGKPSNFFPKLKSTLS-----FSSAS 60
           M+LLS  S   P  SSL L            P S   P   FP+  +T++      +SAS
Sbjct: 1   MDLLS-LSASNPSTSSLSLSRSPFRTLFPKPPISSFNPKTHFPQSSTTVTPLRCHLTSAS 60

Query: 61  SVPALKP---SRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVA 120
             P+      S+T  P  +  ++ PQTP  A RGAE+D MGLL RERIVFLG+SIDDFVA
Sbjct: 61  PAPSKAANFGSQTRKPGITFQLSSPQTPATALRGAESDVMGLLLRERIVFLGSSIDDFVA 120

Query: 121 DAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTAS 180
           DA+MSQLLLLDAQD TKDIRLFINS GGSLSATMAIYD VQLVRADVST+ALGIAASTAS
Sbjct: 121 DAVMSQLLLLDAQDPTKDIRLFINSPGGSLSATMAIYDAVQLVRADVSTVALGIAASTAS 180

Query: 181 IILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHP 240
           IILGGGTKGKRLAMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVTRIIS FTG  
Sbjct: 181 IILGGGTKGKRLAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTRIISSFTGRS 240

Query: 241 FEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKF 292
           FE+VQKDIDRDRYMSPIEAVEYG+IDGVID+D IIPLMPVPERVK++LNYEEISKDP+KF
Sbjct: 241 FEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDRIIPLMPVPERVKSTLNYEEISKDPKKF 300

The following BLAST results are available for this feature:

BLAST of Cla008866 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLPP4_ARATH	2.7e-104	68.54	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
CLPP1_SYNSC	5.1e-55	54.74	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
CLPP2_SYNS9	1.1e-54	54.21	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
CLPP1_SYNPX	3.7e-53	53.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH...	[more]
CLPP1_PROMM	3.7e-53	54.55	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]

BLAST of Cla008866 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S1_CUCSA	8.1e-140	89.12	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G00504...	[more]
A0A061G8D9_THECC	7.6e-114	76.98	ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_016742 ...	[more]
A0A0D2R6I8_GOSRA	4.2e-112	77.05	ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_00...	[more]
A0A059CBQ6_EUCGR	6.0e-111	81.25	ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_...	[more]
A0A0B0PZ48_GOSAR	7.9e-111	75.17	ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_157...	[more]

BLAST of Cla008866 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095454\|ref\|XP_008448589.1\|	1.4e-148	94.56	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
gi\|449456777\|ref\|XP_004146125.1\|	1.2e-139	89.12	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
gi\|590680694\|ref\|XP_007040931.1\|	1.1e-113	76.98	ATP-dependent Clp protease proteolytic subunit 4 [Theobroma cacao]	[more]
gi\|823151327\|ref\|XP_012475491.1\|	6.0e-112	77.05	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Goss...	[more]
gi\|1012124170\|ref\|XP_015963188.1\|	2.3e-111	71.38	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Arac...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006508	proteolysis
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
biological_process	GO:0006515	misfolded or incompletely synthesized protein catabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009368	endopeptidase Clp complex
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU14629	watermelon EST collection version 2.0	transcribed_cluster
WMU30009	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU33345	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU45896	watermelon EST collection version 2.0	transcribed_cluster
WMU52092	watermelon EST collection version 2.0	transcribed_cluster
WMU57655	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla008866	Cla008866.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU14629	WMU14629	transcribed_cluster
WMU45896	WMU45896	transcribed_cluster
WMU30009	WMU30009	transcribed_cluster
WMU33345	WMU33345	transcribed_cluster
WMU52092	WMU52092	transcribed_cluster
WMU57655	WMU57655	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 170..189 score: 3.5E-41coord: 149..166 score: 3.5E-41coord: 227..246 score: 3.5E-41coord: 78..93 score: 3.5E-41coord: 118..138 score: 3.5
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 63..252 score: 36
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 10..291 score: 6.2E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 77..251 score: 5.2
None	No IPR available	PANTHER	PTHR10381:SF24	SUBFAMILY NOT NAMED	coord: 10..291 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla008866	Cla97C10G185620	Watermelon (97103) v2	wmwmbB056
Cla008866	Csa3G005040	Cucumber (Chinese Long) v2	cuwmB200
Cla008866	MELO3C013793	Melon (DHL92) v3.5.1	mewmB446
Cla008866	ClCG10G001000	Watermelon (Charleston Gray)	wcgwmB056
Cla008866	CSPI03G01000	Wild cucumber (PI 183967)	cpiwmB200
Cla008866	Cucsa.322370	Cucumber (Gy14) v1	cgywmB583
Cla008866	CmaCh16G012180	Cucurbita maxima (Rimu)	cmawmB292
Cla008866	CmoCh06G006060	Cucurbita moschata (Rifu)	cmowmB783
Cla008866	CmoCh16G012620	Cucurbita moschata (Rifu)	cmowmB285
Cla008866	Lsi07G011300	Bottle gourd (USVL1VR-Ls)	lsiwmB429
Cla008866	Cp4.1LG14g10100	Cucurbita pepo (Zucchini)	cpewmB202
Cla008866	Cp4.1LG08g09080	Cucurbita pepo (Zucchini)	cpewmB829
Cla008866	CsGy3G000950	Cucumber (Gy14) v2	cgybwmB188
Cla008866	MELO3C013793.2	Melon (DHL92) v3.6.1	medwmB438
Cla008866	Carg16286	Silver-seed gourd	carwmB0678
Cla008866	Carg23564	Silver-seed gourd	carwmB1049
Cla008866	CsaV3_3G001040	Cucumber (Chinese Long) v3	cucwmB209
Cla008866	BhiUN179G3	Wax gourd	wgowmB575

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla008866	Cucurbita maxima (Rimu)	cmawmB789