ClCG08G009370 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G009370
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	50S ribosomal protein L21
Location	CG_Chr08 : 22006105 .. 22014834 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGAGCCGGCGTTCCCACGTGAAGAGTAGGGAGAAGGGGTGAAGAAGACGGAGGGGAAATTGACCCTATAGCCCAATCAAGCTTATGTTTCGAGTTCAAAGTTACTATATTTTATATATTTTCTCAATTTTTTTTCCTCTCAATTGGAATTATAAATGTTACTACAGACCAAAATTTTCTCTCATTTTGATTTCAACCTCTTATTAAATTTTCCTTTCTCCAATAATGTTTACAATCACTCCACTTTGCCAACGACCAATTCCAATGAAAGAGTACCTTCGAATGCTCCAATTTTGTCGATGACCAGCTCTCACGACTAATTTCAACGACTACCTTTAGTGGTCAACTTTGACAATCACTTTCGACGACCATCTATGCGACTAAACCCAATGACCACAATCAGTTTATAGTATTTAGTCTTCTTTTATAATAATTTGACATCAATAGAAATGCTTAAAATGTATAGTAAACCAACAAAACTTGTGTATAAGAACTTTTTTTTTTTTTTTGGAGAATCCAAACACACAAGCGTTTTTTTTAACAATTTTTATGAGAAGCTTTTAAATGAATTGACTTTTTGAGGAAAAAATAATTTTAAGTCAATCCAAACATGCCTAATATATTACTTGTTTCATGTGTTTCATCTAAATTTAAAGCAAGAAAACTTTGTAATATATGGGGGAAAAAGTCATTTATAAAATTGAACTAGGAAATGAGATAAGAAATCACCAAAAGAAAATATTTTACAACAGTTTTTACCCTATTTGAAAAATGTATTCGATCTACCCTTCTTCTTGAACTGGTTTTGAATGATTATTTACCATTATTCTTTTAGTCATGTATAATGTATCTAAATTGATAATGTTTTTGTGTGTCATCGTGGTGGTGGCTTGTACTTAGCAACTATTACTCCTAGATTTATTAATCAATTATATGAATTTTTAGACCAAACCAACAAAGAATAACATAATTTAAACCCCAACCCATTTAAAAAAATTGGCATAACAAATCTTTTTATTCATATTCCCAAAATATGGTATCTAAAGTATAGCACTTGTATAATATAGTACCAAAAAAAAATTAATAAAAAATAAAAACAACCATAAACCTTAAATTCATACTTAAGAATTCCAAGTTAAACAAATTAGCAACCCAATCACATAAAACTCTAAACTTTGACTAAAATAATTTGCACTTCGAACACAAATTTCTTAAACTCAAACTAAGATAATATGCACTCAAGCACTGACTTTCTAAACCTAGAGTAAAATAGTTTGTATCCCAAACACAATCAACTCTACCTATGTACTATTATAACTCCACATATTATACTAACTACGGACTATTATAACCAACGTTGTGACCTAAACAACCCCTAAAAAGTTACATTTTCAAAATCAAGAGTGAGTTTTGTCACTCAAATTAAGGTAGTAATTATCTATGGATAATAATTGCTTGTATTAATCGTACCGTTCTCTATATGTGCCATGGCCCGATGGAATGAAAACAGAGGGAGTCGAAGACGAAAGAGAACTCCAAAGAAGGGAAGGGTGTCCCTATAACAGATACCGATGATTTCTCCTCTATGTTCCTTAGGGTACAAAGTTAGGTTAAGTTGACAATAATTGTTTGTATTTCAAGTGTAGAGCCGAATTGCGTTGGTATAAGAAGTTTGTGTTTGAATTGCATATATATTTTAATTAGATTGAGTTATGAGTATTTAGTGCAGTTTTTTGTAAACTAAAAAGCATGAATTTTTATGGTTTTTTTTTTTCCTTCTCAACTTTTTGTTCCACCATTCAACTACATAAATAAATTCTAAAATTTTTAACACTCATTCGAGATGTGAACTCAAGAACTTGAAATATATTTTACAATTTTCTATATGTAATTATTGCAATTGATGTATATAAAATATTGTTTTTTCTTTTTATATAATCATCAATCTTACAACATATTTTTATGAAAATTTATTAAATAATAATCATCTTCGTGTAAGAAAAAACATGATGCGAATATATTTCTAAAATTTATCAACACAATGCTTATAAATAATTTTGTTTTTTCAAAAAAGAAAAACCAATAGTAATGACATTTTTAAATCTTATAGTTTCGAATACAATTGCATTGTGAGGCAATTGGATAGATATTCAGAAAATGAAAGAAAATTATAATTATAGCAATTTTGGAAAGAATCCTCCAACAAATTATAGTATGGTTTTCTGAGATTTTCTTGAAAAAGATATTGAAGAAACCCTAACATGGGGGCTATAAAGAGGGCATGAAATCAAGGACTCATGACAAGGAATTCCTCAGTTTTGCTTATTGCTTAACTTTTTTTTTTTTAAGCATTTTTTATTCTTTTGTTATTGTAATCTTCTTGAGTTCTTGCTACTCTGTATGTAGTCGAACCACTCTCATCTAAAGATTTAAGGTGTTAAGACCTAACTATCCCTAACAAAAGAAAGTTGGGTTGATTGGAGGAATTGCTAGTAAATCTCTCATGTTGAATTGCTTTCTATTGTAATTTCAGTTCCTACACTTTATGATTCCAAACAATGTTTTAATCAAAGTATATATTCCATATTTTCCTTCATATTTTATTTATGGTTTTACCAAATTCCTCCTTTCTATCAATTGAATACAAGTTCGCCATTAACATGTTCATTATTTCTAACCTTTCTTTTAAGGTACAAGTCTAAAGTATTTGTCGATATAACATAATGCAAAAGAATCTGCATATATAGCAAAACTTAGATCCAACTCTCAAAGTCAATAATAAAGCCCATTCATAATAGGAGTATATCACCAAAAGATTTTGCTATTGCTATCAATGATGATTAGTGATAGACATCTATCATCGATAGCAAAATCTATAGCCGATAGAAGTATGTCATTGATAGATTAGCATTAATAATTGAGTCTATCGTTGGGCAGACTCTATCGTTGATATGAGGTATCACCAATAAACTCTATCAATGATATGAGGTATCACCAATAGACTTTATAGGTTATTTGAGTCTATAATTTATAAACTTATATTATTTGGAATCTATCAATGATAGTCAATGATGGAGATTCCATCAAATTACTTTGAAAATATGTTGTTGATTATCAATGAAAGAATGGAGAAAAAAAACTAGAGGAAGAAAGTGAACAAATGCAGGAAGAAAAATAACAAATATCTGTTGAAATCTATGAGTGATAAAAGAGATAGGATATATGTGTTGGGATGACCCACATCACCTTAGGCCTAAGGCTCAATAAGTCACATGGGGAGTTTCTTTTTTCATTTGTCTCACATTGGAAAATTAAGGAGTGGTGAGAGGGTATATATATATGAGCACTTCTAGAAATTTGTAAAAGTGGAGAAAGTGGGAGTAAAGGGTCTTTCCTCAAATGTGCGTTGTTGTTGTCCATTTGGTAAACTCCAACAAAATAATAATAGAGAGGAAAAGGAACTTGTTTTCCTTTATTTTATTATGAGCTAACTTCTCAATATTCAAATATTAAATACCCAAACCTTTCATGCACACAAAATAATTGCGCTCTTTTAATAGCATAGTTTCCTTTTATTGAGTTTATAAGTTGAGTCTAATATTAAAAGGGTTTAGTGAAACTTTATTTTCATAAAAGCAGTCTAGGAAAATATTTTAAACATAAAACTTTGTTTTTTTTATCTTAGACATTGGACAAAACCTTTAAAATCTTGAATTCTGTTCTTATTTATCTAAGTTCTCATTAACCATGGGCATTTATATTTAATGGCTTAATCTCCTAAAGATACTTCTTATAAGGTTGAATAGGTGTTGAATCCAATTCACCATGCAAAAGTTTGAGTTAAAATTGCATTTTGCATGAAAAATGACATTCTCTAACCAAAGCATAGGCACATATTATTGTTGTCTCTTATTTTGGTCATTTTCAATTTGTTTCACATAACCAACCATCTCCCAACAATTTTTTTCGTTTACTGTGCATTTGCATTACTGAGAAAATTTTCGTTGATTTTAGACTTTTGTTACATCCATTCCCTTGGGTTCAATATCTAAAGTACAGCTGCATTACTTGAGTCAAAATTGCATTTTGCATGAAAGGTGATAGTGTGTACTTGCATTGGGGGCAAAGATTATTTATTCTTTATAGGACTACACATCATGAGCTACATCTTGGTTGCTGGGTATTAGTCCTCGCCAAAGTTGATCATCAAAGGTGGTCCTTACTGAAATTTTTGGTGAAATTAGAGTTAGTTGATGAAGTAATCGATGGAGTTAGTAACTTTAGGTGATCGTTAGAGTTGATTGACAAGGGTGGTCCTTGTCAAAGTTGATCATTATAGGTGGTCTGCATCAAAATTTTTGTCAAAATCAATCTTCACCCAAAGTGGTTATTGAAATTGATTGCCAGAATTAATTGCATGGTGGTCACTAAGCGAGACAATAGTTATTGTGAACGGTAGAATGATTAAAAATATTTGAGTTAGAGTGAGCTAAAGTTTCTAATTTTTACTAACTCAACCAAGTAAGGTTGGCGACCCAAATTCCCAATTCTTCGATATAGGGGACCGAAAAGACAATTTTTATTTTTATTTTTATTTATTATTTATTTTTTTTTAGCTTTCTTTTTCCTAAACCCTATTTCATTTCACGTCCAGCCACATCTCCATCCCCTCTCCCCCTCGCTCTCATGACCAGCCACTGCACACCGCTGCTGCACGCCGCTCGCCACTCCTTCCCGACGTGATCTCAGGGACTACAGCCGCACGTTGCACTCTCAACCTCCCGACGAAGTCTGCGCCGCTTCCTCCCTTTTACACTCTCTCGCCACTCGACCAATCAAAGTTGCTTATCTCTGTTTTTTTCCCTCATAAACAGAAAGTGGTTCAGCCCCTAACCCGCGCCGCTGGTGAGATCGCACCGCCCCTCACGCCCACCGCCGGCCAGTTTTCAGATCCCCGAGGTTTTGATTTTTGTTCTATTTTTCATATTGTTTCGTTGTTTATATTGTTACCGTGCACACGAAGAAGTAAAGCAGTAGAAGCATCATTATTATATTTTTGTTGATTTCTTATTCAGCCAATGTTTAACCAATCCAAATGAAAACAGAAAACAGAAAACAGAAAATGTATATATCACAGATTAGGAAAATAGTTGAACAGAGTTTGTTGTACAACTGTGTCTTTGAGTTCTAAAGATTAGCAAAATAGCAAATTGAATCAATTAATAAAAATGAAAAAAATCCGAAACATCAATAAATAAAAGGGAACAAAAATGTTCAAGAAACTTACGGAAGCAAAAAAGAAAACTGACCTTTATGTAATTTACTTGGCTATAATAAACTTGTTGGAATCAAAAAGCTGTATTGAAAACATTGTTTCAGTTAAAAAAGAACAACAAAATACCATGGAAAAACAGCATAGAAACACATAAAAGGATCCACGAACGAGGAATGAGTAGACCTGGAGTTTGCTTGAATATTGAAAAAATTATTGATGCATATGAACTGGTGTAGGGAGGGGCAAATAAAAATAAGGGATCTCCTATAAGGTAAAATGGGAAACATATTTTTTTCAAAATGTGAAATCCTCCAAATTTCGACCTATTTGGAATAGAACTTTTTTCTGTAAAAAAACAGGATTTCAAATCACAACAAATTCCAAATTCTTCTCTTCCTTTTTTTCCATCCAAACACGCTGATCAAATTCAGAGGTTCCCAACATGGGTTTATGCTTTTATTTTCTTTCTGCAGATCGAGAAGTTTAGAATATTGCTGCAGTATGTGTAAGAGTTGTATATAGATCAAAGGCCATAAGGATCACCACCATGGCGAACAGACGGTGTTTACAAGTACTAACTCGTCATGCCTCGGCAATTTTTAACACCAAGCCGTATATCCACCCTCTGAAAATTGCACCTTCCTTCCTTTCCCAAAATTTTCATACACATGCTTCTATGTCAAATTGCCTTTCTACTAAAATTGATCCTTTGTGTACCTACTGGTCGCATACCCGATATCTCTCATCTGATAGTCGGAATGGCAATGAAGATGATTTTACTGAAGATGAAGATGAAAATGATGAAGGATATGATAGTAGTGAGGATGATGGTATTTCTGTGTCGAGCAGGGGCATGCAAAAGGAGTATACAAAGGAGGAGAAGGAGGCTGAAGCAGCTGCTATTGGATATAAAGTAGTAGGGCCACTTGATCAATCTAAAGGGGTTTTCAAGCCTTATGAGCCTGTATTTGCTGTCGTTCAGGTTCAAACTTGTGGCATGTCTTAACAAGTTTTATGAATTAGGAGTTCGACAGTTATCATTTATCCACTCTTTTCTTTTGGCTACTTTTGTAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGTGATGTGAATGACAAGGTTTGCAACTCCTATACCATTCGTCATTATCGATATTTTAGATTTAGTTTATCAGTTTTACAAGACATGCTAGCTTTTGGCCATTTTTCTACATGGTCTCCTGCTCCCAATCTTTTGATATGAACCATCCAACCGGATTAGTAAGACTGTATCTATTAATTTTTTCATAGATACTTGTAAAAATGATTTAGTTTAAAAATCATTATTTTCATAAGTTATTCCAAACACAATATTTCACTGTGGAGCAACTTTCAGAACCTAGAACTGAAGTGTTGTATGATTTAAGATTGTACTCATACTTTTTCTATTCCGCTGTTGTTTCCAGGTTGTAATTTGGAAAGCCAAAGTTTGTGCTATGCTATTTTGTTTTGATTGGTACAAGGATTCGACTTAAACATTAATTTGTCAGGCTGTCAAGCAGTTTTTAGATGAATAAGTATAGAAGAGCTTCTTTGATTTTTTTTGACATTGTGACAAAATACAGTAGAGAGCTTCTAAGAAGCAATTGTTTTACATACATGAGAAGTTGCACTTTTCCGCTTGTCATAGATGAGGCTAAAATATGTGCTGATGTATTTTATTTAGTACGAAGAATGGCTTCAAGCTAGGTAAAGAACCTGGAAAATATATTATCGTTTGGTAGCTTTTATTCAAGTTCTTATTGTTAGTCACATGTGAGATACTTCATAAAGGGATCTTTTATGACATATCTATTGCCGTTTTTCCTTGTCAGATTTGAATGCTGTTATGTAGATTTTCTCATGTTTGCTGTTATACCATGCCTACTTGATTTTGATTATCTGTGTTGAACTTCTGTACTGTTATTGACTAAAATTCTTCTATGTATTTCATCTTCAGCAAGCTTTAATGAGTATTCTTTTATGTATTTATCTTTTGCAGTTGATATTGAATAAGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTTCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGTAAGAGTGCTACTTACTTGCTCTCTCTCTTTTTTTTTTTTTTTTTTTGCTAATACAATATATTGTAAGATTTTTTTTTTTTTTTTTTTGCTGTTGTGATTTTACTGATGTTACTCAGTGATTCTCGTGGGCTGTTACCATACCTTTTTTAAGGACTAATTGTCTAGTTCTTTGTGCAATTTATTTGGAACCTATATATTAAATGGATGTAAACAAAGATCCAATTGCCAACTTGAACATAACACAATTAGGTAAGATGTAGCTCTCAACCAAAAGATCAAAAGTTTGAATCCCTATCCGTACATGTTGAACGGAAAGAGTAGGAATATCAATTTGTTAGCCAAGATTATCTACTTTCAATATATCCAGGCATCAAGGTAGATCAAAACAATGCTATAGGGTTGACCTAGTGGTAAATAGGAGGCATGACCTTAATAAAGAGCTAAGGGGTCATGGGTTCAATTAATATGCTATGATCTCATCATATAAACTGTGTTCTCTCTATGGTTGTTCTTCAAATGTAAAATTTTCTTTTCCCCTTGTGCTTTTTTTATTTTTCCCCCTTCTTTTGTTTCCAAATTCCCAACCGGCAACCACATATTTTCTTGGAAGTCATTCTCAAATTTGTGTTTCAATTGTAACCTGAATGATTTTTCCTCTTTTTCAAAAGGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGTATATCCAAACTATCCAGAAAGAATGAAAGAGTTTCTTATTCAAGTTATCTGATGGGTGACCTTTTTTTGCACTGTTTACTATCTCAGGAATTAACAAAGTTGAGGATTATCGATATCCAAGGTGTTGACAAACCAGAAGACATTGGAAATCCTTCAACAGTAGCTAGTAAGAAGCAAGAACAAGTTGCAGTAGCTGCTTAGTAGAAGGTTCCATGATTCTTGCTAAAATTGCTAAGTTGGATCTCCTAATTCCTTAGAAGGGTGTCATTTCCCCCAACTAGGCTTGTTTTGTAGGTAGGCCACTATGCTAGGATTCCCATTTCTTTTCTTCCTTTTCCTGGTAACTTTCTCCACAAATGTGATATCTTCTATTTAAATAATTTGAATTTTCTCATAAGAATTGTGCTCATACATTTGAGAAGAGTTTGGAATTGTATCGACTAGGATTTATGCCATATATGTATGGTAGATCTTGAGTTTCTTGATTTGTTGGGAGCTTACAGGATCATACATTGAATACATATATTTTCTTTCATTTTTCCAGA

mRNA sequence

ATGGAGGTGAGCCGGCGTTCCCACGTGAAGAGTAGGGAGAAGGGCCACATCTCCATCCCCTCTCCCCCTCGCTCTCATGACCAGCCACTGCACACCGCTGCTGCACGCCGCTCGCCACTCCTTCCCGACGTGATCTCAGGGACTACAGCCGCACGTTGCACTCTCAACCTCCCGACGAAGTCTGCGCCGCTTCCTCCCTTTTACACTCTCTCGCCACTCGACCAATCAAAGTTGCTTATCTCTGTTTTTTTCCCTCATAAACAGAAAGTGGTTCAGCCCCTAACCCGCGCCGCTGGTGAGATCGCACCGCCCCTCACGCCCACCGCCGGCCAGTTTTCAGATCCCCGAGTATGTGTAAGAGTTGTATATAGATCAAAGGCCATAAGGATCACCACCATGGCGAACAGACGGTGTTTACAAGTACTAACTCGTCATGCCTCGGCAATTTTTAACACCAAGCCGTATATCCACCCTCTGAAAATTGCACCTTCCTTCCTTTCCCAAAATTTTCATACACATGCTTCTATGTCAAATTGCCTTTCTACTAAAATTGATCCTTTGTGTACCTACTGGTCGCATACCCGATATCTCTCATCTGATAGTCGGAATGGCAATGAAGATGATTTTACTGAAGATGAAGATGAAAATGATGAAGGATATGATAGTAGTGAGGATGATGGTATTTCTGTGTCGAGCAGGGGCATGCAAAAGGAGTATACAAAGGAGGAGAAGGAGGCTGAAGCAGCTGCTATTGGATATAAAGTAGTAGGGCCACTTGATCAATCTAAAGGGGTTTTCAAGCCTTATGAGCCTGTATTTGCTGTCGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGTGATGTGAATGACAAGTTGATATTGAATAAGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTTCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGAATTAACAAAGTTGAGGATTATCGATATCCAAGGTGTTGACAAACCAGAAGACATTGGAAATCCTTCAACAGTAGCTAGTAAGAAGCAAGAACAAGTTGCAGTAGCTGCTTAGTAGAAGGTTCCATGATTCTTGCTAAAATTGCTAAGTTGGATCTCCTAATTCCTTAGAAGGGTGTCATTTCCCCCAACTAGGCTTGTTTTGTAGGTAGGCCACTATGCTAGGATTCCCATTTCTTTTCTTCCTTTTCCTGGTAACTTTCTCCACAAATGTGATATCTTCTATTTAAATAATTTGAATTTTCTCATAAGAATTGTGCTCATACATTTGAGAAGAGTTTGGAATTGTATCGACTAGGATTTATGCCATATATGTATGGTAGATCTTGAGTTTCTTGATTTGTTGGGAGCTTACAGGATCATACATTGAATACATATATTTTCTTTCATTTTTCCAGA

Coding sequence (CDS)

ATGGAGGTGAGCCGGCGTTCCCACGTGAAGAGTAGGGAGAAGGGCCACATCTCCATCCCCTCTCCCCCTCGCTCTCATGACCAGCCACTGCACACCGCTGCTGCACGCCGCTCGCCACTCCTTCCCGACGTGATCTCAGGGACTACAGCCGCACGTTGCACTCTCAACCTCCCGACGAAGTCTGCGCCGCTTCCTCCCTTTTACACTCTCTCGCCACTCGACCAATCAAAGTTGCTTATCTCTGTTTTTTTCCCTCATAAACAGAAAGTGGTTCAGCCCCTAACCCGCGCCGCTGGTGAGATCGCACCGCCCCTCACGCCCACCGCCGGCCAGTTTTCAGATCCCCGAGTATGTGTAAGAGTTGTATATAGATCAAAGGCCATAAGGATCACCACCATGGCGAACAGACGGTGTTTACAAGTACTAACTCGTCATGCCTCGGCAATTTTTAACACCAAGCCGTATATCCACCCTCTGAAAATTGCACCTTCCTTCCTTTCCCAAAATTTTCATACACATGCTTCTATGTCAAATTGCCTTTCTACTAAAATTGATCCTTTGTGTACCTACTGGTCGCATACCCGATATCTCTCATCTGATAGTCGGAATGGCAATGAAGATGATTTTACTGAAGATGAAGATGAAAATGATGAAGGATATGATAGTAGTGAGGATGATGGTATTTCTGTGTCGAGCAGGGGCATGCAAAAGGAGTATACAAAGGAGGAGAAGGAGGCTGAAGCAGCTGCTATTGGATATAAAGTAGTAGGGCCACTTGATCAATCTAAAGGGGTTTTCAAGCCTTATGAGCCTGTATTTGCTGTCGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGTGATGTGAATGACAAGTTGATATTGAATAAGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTTCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGAATTAACAAAGTTGAGGATTATCGATATCCAAGGTGTTGACAAACCAGAAGACATTGGAAATCCTTCAACAGTAGCTAGTAAGAAGCAAGAACAAGTTGCAGTAGCTGCTTAG

Protein sequence

MEVSRRSHVKSREKGHISIPSPPRSHDQPLHTAAARRSPLLPDVISGTTAARCTLNLPTKSAPLPPFYTLSPLDQSKLLISVFFPHKQKVVQPLTRAAGEIAPPLTPTAGQFSDPRVCVRVVYRSKAIRITTMANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKIDPLCTYWSHTRYLSSDSRNGNEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEEKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGVDKPEDIGNPSTVASKKQEQVAVAA

Homology

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BLAST of ClCG08G009370 vs. Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.1e-67
Identity = 146/278 (52.52%), Postives = 191/278 (68.71%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFH----THASM-SNCLSTKIDPL 192
           MA+ RC + L+R A+ +F+    I+  +   SF    F     +H ++  N   T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 193 CTYW--SHTRYLSSDSRNGNEDD-FTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEEK 252
            ++W  S  R  SS++++ +ED+  +E ED+++E  +  ED     +   +++EY+  EK
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDS----ADMEVEREYSPAEK 120

Query: 253 EAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDK 312
             EA  IGYKV+GPL  S+ +FKPYEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD+NDK
Sbjct: 121 VEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDK 180

Query: 313 LILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQE 372
           L L KVLLLGS+SQTI+GRP +P A V AVVEEHALD KV+IFKKKRRKNYRRT+GHRQE
Sbjct: 181 LELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQE 240

Query: 373 LTKLRIIDIQGVDKPED--IGNPSTVASKKQEQVAVAA 401
           LTKLRI DIQG++KPE   +  PS  A  +Q +  + A
Sbjct: 241 LTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

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BLAST of ClCG08G009370 vs. Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1


Query: 263 KGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNKVLLLGSSSQTIVG 322
           KG   P E +FAVV IGS Q+ V  G  I+T+RLK   VNDK++LNKVLL+G+ + T +G
Sbjct: 114 KGPPPPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIG 173

Query: 323 RPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGV-DKPED 382
            P V +A V AVVEE  LD KVI+FK K++KNYRR  GHRQ +T+++I  I G  D P  
Sbjct: 174 TPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPAS 233

Query: 383 IGNPSTVASKKQEQVAVA 400
                  A ++ E  A A
Sbjct: 234 TLEAEVEAKEEAEAEAEA 251

[Close]

BLAST of ClCG08G009370 vs. Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1


Query: 243 EKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 302
           E E E   I   VV  + +        E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 303 DKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 362
           D+++LNKVLL+G+ + T +G+P V +A V AVVE   L+ KV++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 363 QELTKLRIIDIQGVDK 379
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

[Close]

BLAST of ClCG08G009370 vs. Swiss-Prot
Match: RL21_RHOCS (50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplU PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 272 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNKVLLLGSSSQTIVGRPTVPSAVV 331
           +FAV++ G  Q+KV+NGD I  E+L   D    + L+ VL++  + +T +G P V  A V
Sbjct: 1   MFAVIRTGGKQYKVANGDVIKVEKL-VADAGATVTLDDVLMVSDAGKTTIGTPVVQGAAV 60

Query: 332 QAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIQ 375
            A V   +   K+IIFKKKRR+NYRR  GHRQ+LT LRI  IQ
Sbjct: 61  TAEVVAQSRGPKIIIFKKKRRQNYRRKNGHRQDLTVLRITGIQ 102

[Close]

BLAST of ClCG08G009370 vs. Swiss-Prot
Match: RL21_RICB8 (50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) GN=rplU PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1


Query: 272 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNKVLLLGSSSQ-TIVGRPTVPSAV 331
           +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VL++G  S+ + +G P V  AV
Sbjct: 1   MFAVIKAGGKQYKVDQNSVIKVEKIEG-ELGSKIQLNQVLMMGEYSKPSFIGTPLVKGAV 60

Query: 332 VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDI 374
           V A +     D K+I+FKKKRRKNYRR  GHRQELT+L+I+DI
Sbjct: 61  VTAEITNQLRDNKIIVFKKKRRKNYRRKAGHRQELTELKILDI 102

[Close]

BLAST of ClCG08G009370 vs. TrEMBL
Match: E5GBZ0_CUCME (50S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 7.7e-133
Identity = 245/278 (88.13%), Postives = 258/278 (92.81%), Query Frame = 1


Query: 126 KAIRITTMANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKID 185
           KAIRITTMANRRCLQVLTRHASAI +TKPYIH LKIAPS L +NFHTHAS+SNCLS K D
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 186 P-LCTYWSHTRYLSSDSRNGNEDDFTEDEDEN--DEGYDSSEDDGISVSSRGMQKEYTKE 245
           P LCTYWSHTRYLSSDSRNGNEDDFTEDEDE+  DE YDS EDDGIS SSR M+KEYTKE
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFTEDEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKE 122

Query: 246 EKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 305
           E EAEAAAIGYKV+GPLDQS+G+FKPYEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVN
Sbjct: 123 EMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 182

Query: 306 DKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 365
           DKLILNKVLL+GSSSQTIVGRPTVPSA VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR
Sbjct: 183 DKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 242

Query: 366 QELTKLRIIDIQGVDKPEDIGNPSTVASKKQEQVAVAA 401
           QELTKLRI+DIQG++KPE+IG PS V  KKQEQVAVAA
Sbjct: 243 QELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]

BLAST of ClCG08G009370 vs. TrEMBL
Match: A0A0A0KFG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G357000 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 4.2e-131
Identity = 243/271 (89.67%), Postives = 254/271 (93.73%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKIDP-LCTYW 192
           MANRRCLQVLTRHASAIF+TKPYIHPLK APSFLSQNF THAS+SNCLS K DP LCTYW
Sbjct: 1   MANRRCLQVLTRHASAIFSTKPYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTYW 60

Query: 193 SHTRYLSSDSRNGNEDDFTEDEDEN--DEGYDSSEDDGISVSSRGMQKEYTKEEKEAEAA 252
            HTRYLSSDSRNG+EDDFTEDEDE+  DE YDS EDDGIS SSR M+KEYTKEE EAEAA
Sbjct: 61  PHTRYLSSDSRNGSEDDFTEDEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKEEMEAEAA 120

Query: 253 AIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 312
           AIGYKV+GPLDQS+GVFKPYEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK
Sbjct: 121 AIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 180

Query: 313 VLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR 372
           VLL+GSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR
Sbjct: 181 VLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR 240

Query: 373 IIDIQGVDKPEDIGNPSTVASKKQEQVAVAA 401
           I+DIQGV+KPE+IG PS VA KKQEQVAVAA
Sbjct: 241 IVDIQGVEKPENIGKPSKVADKKQEQVAVAA 270

[Close]

BLAST of ClCG08G009370 vs. TrEMBL
Match: I6LNS9_HEVBR (Mitochondrial 50S ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 182/279 (65.23%), Postives = 208/279 (74.55%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKP--YIHPLKIAPSFLSQNFHTHASMSNCLS----TKIDP 192
           MA RRCL  LTR A A+ ++ P    HP K+A SF   N ++  ++  C S    TK D 
Sbjct: 1   MAQRRCLHTLTRQAIALLSSNPTTLYHPCKVAASF--PNLNSVKALLICKSSHVFTKADS 60

Query: 193 L-CTYWS--HTRYLSSDSRNGNEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEE 252
           + C++W   H RY SSDSR+ +E+D   DEDE   G DS   DG  V    +++EYT EE
Sbjct: 61  IWCSFWPYHHRRYFSSDSRDESEND---DEDEETAGEDS---DGEEVKGSDLKREYTAEE 120

Query: 253 KEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVND 312
           KE EAAAIGYKVVGPL +S  VFKPYEPVFAVVQIGSHQFKVSNGD IFTE+LKFC+VND
Sbjct: 121 KEEEAAAIGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQFKVSNGDCIFTEKLKFCEVND 180

Query: 313 KLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQ 372
           KLILNKVLLLGSSSQTIVGRPTVP A V AVVEEHALDAK IIFKKKRRKNYRRTKGHRQ
Sbjct: 181 KLILNKVLLLGSSSQTIVGRPTVPDAAVHAVVEEHALDAKAIIFKKKRRKNYRRTKGHRQ 240

Query: 373 ELTKLRIIDIQGVDKPEDIGNPSTVAS--KKQEQVAVAA 401
           ELTKLRI DIQG++KPE   +P    S  K+QE++AVAA
Sbjct: 241 ELTKLRITDIQGIEKPEMKVDPKPKMSGVKQQEKIAVAA 271

[Close]

BLAST of ClCG08G009370 vs. TrEMBL
Match: A0A067JDY3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21444 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 171/278 (61.51%), Postives = 202/278 (72.66%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYI--HPLKIAPSFLSQNFHTHASMSNCLSTKID-PLCT 192
           MA RRCL  LTR   A+ ++ P    H LK +PS  +          + + TK D   C+
Sbjct: 1   MAQRRCLHSLTRQTVALLSSNPTTLHHSLKASPSIPNSISIKSLIFRSSIFTKADITWCS 60

Query: 193 YWSH--TRYLSSDSRNGNEDDFTEDEDENDEGYDSSED--DGISVSSRGMQKEYTKEEKE 252
            WSH   R+ +S SR+ ++D+   +EDE  EG DS  +  +G   +   +  EY+ +EKE
Sbjct: 61  LWSHHHRRHFASSSRDESDDN---EEDEETEGEDSEGEYSEGEEPTGSALNIEYSAQEKE 120

Query: 253 AEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 312
            EAAAIGYKV+GPLD+S  +FKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL
Sbjct: 121 EEAAAIGYKVIGPLDKSDQLFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 180

Query: 313 ILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQEL 372
           ILNKVLLLGSS+QTI+GRP VP A V AVVE+HALDAKVIIFKKKRRKNYRRTKGHRQEL
Sbjct: 181 ILNKVLLLGSSTQTIIGRPMVPDAAVHAVVEQHALDAKVIIFKKKRRKNYRRTKGHRQEL 240

Query: 373 TKLRIIDIQGVDKPE---DIGNPSTVASKKQEQVAVAA 401
           TKLRI DIQG++KPE   D       A+KKQE+VAVAA
Sbjct: 241 TKLRITDIQGIEKPERKIDSPKSKKAAAKKQEKVAVAA 275

[Close]

BLAST of ClCG08G009370 vs. TrEMBL
Match: V7CPT8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G233700g PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.4e-80
Identity = 167/270 (61.85%), Postives = 198/270 (73.33%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKIDPLCTYWS 192
           MA+RRCL+ LT+    +F     +  L + P      FH  A  S+ + TK   +   W 
Sbjct: 1   MASRRCLRTLTKTTPFLFRNPSSLRSLTLPP------FHL-AKASSSVFTKSAHVFAQWP 60

Query: 193 HTRYLSSDSRNGNEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEEKEAEAAAIG 252
           H RY SSD ++ + D+  ED  E ++  D  +D+ + VSSR  +K YT EEKEAEA AIG
Sbjct: 61  HLRYFSSDKQDDHSDE--EDYSEEEDYEDDDDDNDVPVSSR--KKVYTAEEKEAEAEAIG 120

Query: 253 YKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNKVLL 312
           Y+VVGPL +    FKPYEPVFAVVQ+GSHQFKVSN DSIFTERLKFC+VNDKLILNKVLL
Sbjct: 121 YRVVGPLPKDNDAFKPYEPVFAVVQVGSHQFKVSNRDSIFTERLKFCEVNDKLILNKVLL 180

Query: 313 LGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIID 372
           LGS+SQTI+GRP VP+A V AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI D
Sbjct: 181 LGSASQTIIGRPIVPNAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRITD 240

Query: 373 IQGVDKPEDI--GNPSTVASKKQEQVAVAA 401
           IQG++KPE +    PS  A KKQE+VAV+A
Sbjct: 241 IQGIEKPEVVLTEKPSKPAKKKQEKVAVSA 259

[Close]

BLAST of ClCG08G009370 vs. TAIR10
Match: AT4G30930.1 (AT4G30930.1 Ribosomal protein L21)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-68
Identity = 146/278 (52.52%), Postives = 191/278 (68.71%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFH----THASM-SNCLSTKIDPL 192
           MA+ RC + L+R A+ +F+    I+  +   SF    F     +H ++  N   T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 193 CTYW--SHTRYLSSDSRNGNEDD-FTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEEK 252
            ++W  S  R  SS++++ +ED+  +E ED+++E  +  ED     +   +++EY+  EK
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDS----ADMEVEREYSPAEK 120

Query: 253 EAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDK 312
             EA  IGYKV+GPL  S+ +FKPYEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD+NDK
Sbjct: 121 VEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDK 180

Query: 313 LILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQE 372
           L L KVLLLGS+SQTI+GRP +P A V AVVEEHALD KV+IFKKKRRKNYRRT+GHRQE
Sbjct: 181 LELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQE 240

Query: 373 LTKLRIIDIQGVDKPED--IGNPSTVASKKQEQVAVAA 401
           LTKLRI DIQG++KPE   +  PS  A  +Q +  + A
Sbjct: 241 LTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]

BLAST of ClCG08G009370 vs. TAIR10
Match: AT1G35680.1 (AT1G35680.1 Ribosomal protein L21)

HSP 1 Score: 109.0 bits (271), Expect = 6.9e-24
Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 1


Query: 243 EKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 302
           E E E   I   VV  + +        E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 303 DKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 362
           D+++LNKVLL+G+ + T +G+P V +A V AVVE   L+ KV++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 363 QELTKLRIIDIQGVDK 379
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

[Close]

BLAST of ClCG08G009370 vs. NCBI nr
Match: gi|659129777|ref|XP_008464840.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis melo])

HSP 1 Score: 481.9 bits (1239), Expect = 1.1e-132
Identity = 245/278 (88.13%), Postives = 258/278 (92.81%), Query Frame = 1


Query: 126 KAIRITTMANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKID 185
           KAIRITTMANRRCLQVLTRHASAI +TKPYIH LKIAPS L +NFHTHAS+SNCLS K D
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 186 P-LCTYWSHTRYLSSDSRNGNEDDFTEDEDEN--DEGYDSSEDDGISVSSRGMQKEYTKE 245
           P LCTYWSHTRYLSSDSRNGNEDDFTEDEDE+  DE YDS EDDGIS SSR M+KEYTKE
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFTEDEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKE 122

Query: 246 EKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 305
           E EAEAAAIGYKV+GPLDQS+G+FKPYEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVN
Sbjct: 123 EMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 182

Query: 306 DKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 365
           DKLILNKVLL+GSSSQTIVGRPTVPSA VQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR
Sbjct: 183 DKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 242

Query: 366 QELTKLRIIDIQGVDKPEDIGNPSTVASKKQEQVAVAA 401
           QELTKLRI+DIQG++KPE+IG PS V  KKQEQVAVAA
Sbjct: 243 QELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]

BLAST of ClCG08G009370 vs. NCBI nr
Match: gi|449452985|ref|XP_004144239.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 6.1e-131
Identity = 243/271 (89.67%), Postives = 254/271 (93.73%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKIDP-LCTYW 192
           MANRRCLQVLTRHASAIF+TKPYIHPLK APSFLSQNF THAS+SNCLS K DP LCTYW
Sbjct: 1   MANRRCLQVLTRHASAIFSTKPYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTYW 60

Query: 193 SHTRYLSSDSRNGNEDDFTEDEDEN--DEGYDSSEDDGISVSSRGMQKEYTKEEKEAEAA 252
            HTRYLSSDSRNG+EDDFTEDEDE+  DE YDS EDDGIS SSR M+KEYTKEE EAEAA
Sbjct: 61  PHTRYLSSDSRNGSEDDFTEDEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKEEMEAEAA 120

Query: 253 AIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 312
           AIGYKV+GPLDQS+GVFKPYEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK
Sbjct: 121 AIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 180

Query: 313 VLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR 372
           VLL+GSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR
Sbjct: 181 VLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLR 240

Query: 373 IIDIQGVDKPEDIGNPSTVASKKQEQVAVAA 401
           I+DIQGV+KPE+IG PS VA KKQEQVAVAA
Sbjct: 241 IVDIQGVEKPENIGKPSKVADKKQEQVAVAA 270

[Close]

BLAST of ClCG08G009370 vs. NCBI nr
Match: gi|313585316|gb|ADR70863.1| (mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis])

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 182/279 (65.23%), Postives = 208/279 (74.55%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKP--YIHPLKIAPSFLSQNFHTHASMSNCLS----TKIDP 192
           MA RRCL  LTR A A+ ++ P    HP K+A SF   N ++  ++  C S    TK D 
Sbjct: 1   MAQRRCLHTLTRQAIALLSSNPTTLYHPCKVAASF--PNLNSVKALLICKSSHVFTKADS 60

Query: 193 L-CTYWS--HTRYLSSDSRNGNEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEE 252
           + C++W   H RY SSDSR+ +E+D   DEDE   G DS   DG  V    +++EYT EE
Sbjct: 61  IWCSFWPYHHRRYFSSDSRDESEND---DEDEETAGEDS---DGEEVKGSDLKREYTAEE 120

Query: 253 KEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVND 312
           KE EAAAIGYKVVGPL +S  VFKPYEPVFAVVQIGSHQFKVSNGD IFTE+LKFC+VND
Sbjct: 121 KEEEAAAIGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQFKVSNGDCIFTEKLKFCEVND 180

Query: 313 KLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQ 372
           KLILNKVLLLGSSSQTIVGRPTVP A V AVVEEHALDAK IIFKKKRRKNYRRTKGHRQ
Sbjct: 181 KLILNKVLLLGSSSQTIVGRPTVPDAAVHAVVEEHALDAKAIIFKKKRRKNYRRTKGHRQ 240

Query: 373 ELTKLRIIDIQGVDKPEDIGNPSTVAS--KKQEQVAVAA 401
           ELTKLRI DIQG++KPE   +P    S  K+QE++AVAA
Sbjct: 241 ELTKLRITDIQGIEKPEMKVDPKPKMSGVKQQEKIAVAA 271

[Close]

BLAST of ClCG08G009370 vs. NCBI nr
Match: gi|645237207|ref|XP_008225099.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Prunus mume])

HSP 1 Score: 320.1 bits (819), Expect = 5.6e-84
Identity = 176/280 (62.86%), Postives = 203/280 (72.50%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSF-LSQNFHTHASMSNCLSTKIDPLCTYW 192
           MANRR LQVL+RHASA+F+T      L+  P+  + Q   T  S    + T  DP    W
Sbjct: 3   MANRRRLQVLSRHASALFSTNTTFQSLQTPPALPIYQPLKTLTSKFPLIFTNPDP---NW 62

Query: 193 SHTRYLSSD-----------SRNGNEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYT 252
           S TR+ SS            S    +DD  +D D++DE    SED+  SVS  G ++EYT
Sbjct: 63  SQTRHFSSSRVGDVNEDNEHSEEEEDDDDDDDYDDDDEAVGDSEDE--SVSGCGSKREYT 122

Query: 253 KEEKEAEAAAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 312
            EEKEAEAAAIGY+V+GPL +S  VFKPYEPVFAVVQIGSHQFKVSNGD IFTERLKFC+
Sbjct: 123 AEEKEAEAAAIGYQVIGPLQKSDRVFKPYEPVFAVVQIGSHQFKVSNGDCIFTERLKFCE 182

Query: 313 VNDKLILNKVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKG 372
           VNDKLILNKVLLLGSSSQTI+GRP +P A V AVVEEHALDAKVIIFKKKRRKNYRRTKG
Sbjct: 183 VNDKLILNKVLLLGSSSQTIIGRPLLPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKG 242

Query: 373 HRQELTKLRIIDIQGVDKPEDIGNPSTVASKKQEQVAVAA 401
           HRQELTKLRI+D+QG++KP+    P     KK E+VAVAA
Sbjct: 243 HRQELTKLRIVDVQGIEKPDVPEKPPKAPGKKPEKVAVAA 277

[Close]

BLAST of ClCG08G009370 vs. NCBI nr
Match: gi|470115673|ref|XP_004294019.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 319.7 bits (818), Expect = 7.3e-84
Identity = 173/274 (63.14%), Postives = 201/274 (73.36%), Query Frame = 1


Query: 133 MANRRCLQVLTRHASAIFNTKPYIHPLKIAPSFLSQNFHTHASMSNCLSTKIDPLCTYWS 192
           MANRRCLQ+LTR  SA+F+  P +H L   P        TH  +   +S         WS
Sbjct: 1   MANRRCLQLLTRRVSALFSANPPLHTLSTPPPL-----STHEPLKALVSKSPLIFSPNWS 60

Query: 193 H-TRYLSSDSRNG---NEDDFTEDEDENDEGYDSSEDDGISVSSRGMQKEYTKEEKEAEA 252
             TR+ SSD  +G   +EDD  +D++++D GY S  DDG      G ++EYT EE  AEA
Sbjct: 61  APTRHFSSDRNDGVDDSEDDDDDDDEDDDIGYSS--DDGSLSKGGGSKREYTPEEMAAEA 120

Query: 253 AAIGYKVVGPLDQSKGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILN 312
           A IGYKVVGPL+ + GVFKPYEPVFAV+QIGSHQFKVSNGDSIFTERLKFC+VNDKLILN
Sbjct: 121 AGIGYKVVGPLETTDGVFKPYEPVFAVIQIGSHQFKVSNGDSIFTERLKFCEVNDKLILN 180

Query: 313 KVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKL 372
           KVLL+G+SSQT++GRP VP A V AVVEEHALDAKV+IFKKKRRKNYRRTKGHRQELTKL
Sbjct: 181 KVLLVGTSSQTMIGRPIVPDATVHAVVEEHALDAKVLIFKKKRRKNYRRTKGHRQELTKL 240

Query: 373 RIIDIQGVDKPEDI--GNPSTVASKKQEQVAVAA 401
           RIIDIQG+ KPE +    PS    KK E+VAVAA
Sbjct: 241 RIIDIQGIQKPEPVVTEKPSKTHGKKPEKVAVAA 267

The following BLAST results are available for this feature:

BLAST of ClCG08G009370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RM21_ARATH	2.1e-67	52.52	50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 ...	[more]
RK21_SPIOL	1.4e-26	49.28	50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1	[more]
RK21_ARATH	1.2e-22	41.18	50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 S...	[more]
RL21_RHOCS	1.2e-17	47.57	50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN...	[more]
RL21_RICB8	1.2e-17	46.60	50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) GN=rplU PE=3 ...	[more]

BLAST of ClCG08G009370 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBZ0_CUCME	7.7e-133	88.13	50S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0KFG2_CUCSA	4.2e-131	89.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G357000 PE=3 SV=1	[more]
I6LNS9_HEVBR	1.3e-84	65.23	Mitochondrial 50S ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2 SV=...	[more]
A0A067JDY3_JATCU	2.0e-80	61.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21444 PE=3 SV=1	[more]
V7CPT8_PHAVU	3.4e-80	61.85	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G233700g PE=3 SV=1	[more]

BLAST of ClCG08G009370 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30930.1	1.2e-68	52.52	Ribosomal protein L21	[more]
AT1G35680.1	6.9e-24	41.18	Ribosomal protein L21	[more]

BLAST of ClCG08G009370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129777\|ref\|XP_008464840.1\|	1.1e-132	88.13	PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis melo]	[more]
gi\|449452985\|ref\|XP_004144239.1\|	6.1e-131	89.67	PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis sativus]	[more]
gi\|313585316\|gb\|ADR70863.1\|	1.9e-84	65.23	mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]	[more]
gi\|645237207\|ref\|XP_008225099.1\|	5.6e-84	62.86	PREDICTED: 50S ribosomal protein L21, mitochondrial [Prunus mume]	[more]
gi\|470115673\|ref\|XP_004294019.1\|	7.3e-84	63.14	PREDICTED: 50S ribosomal protein L21, mitochondrial [Fragaria vesca subsp. vesca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001787	Ribosomal_L21
IPR018258	Ribosomal_L21_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0000741	karyogamy
biological_process	GO:0009555	pollen development
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
biological_process	GO:0048229	gametophyte development
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0006996	organelle organization
biological_process	GO:0009553	embryo sac development
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0043414	macromolecule methylation
biological_process	GO:0016570	histone modification
biological_process	GO:0006412	translation
biological_process	GO:0044702	single organism reproductive process
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0043412	macromolecule modification
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G009370.1	ClCG08G009370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001787	Ribosomal protein L21	HAMAP	MF_01363	Ribosomal_L21	coord: 272..375 score: 22
IPR001787	Ribosomal protein L21	TIGRFAMs	TIGR00061	TIGR00061	coord: 273..373 score: 8.3
IPR018258	Ribosomal protein L21, conserved site	PROSITE	PS01169	RIBOSOMAL_L21	coord: 344..366 scor
None	No IPR available	PANTHER	PTHR21349	50S RIBOSOMAL PROTEIN L21	coord: 190..395 score: 7.5
None	No IPR available	PANTHER	PTHR21349:SF0	39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL	coord: 190..395 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G009370	Csa6G357000	Cucumber (Chinese Long) v2	cuwcgB496
ClCG08G009370	MELO3C026533	Melon (DHL92) v3.5.1	mewcgB296
ClCG08G009370	Cla021933	Watermelon (97103) v1	wcgwmB400
ClCG08G009370	Cla97C08G152190	Watermelon (97103) v2	wcgwmbB336
ClCG08G009370	CSPI06G18620	Wild cucumber (PI 183967)	cpiwcgB522
ClCG08G009370	Cucsa.077520	Cucumber (Gy14) v1	cgywcgB079
ClCG08G009370	CmaCh05G009780	Cucurbita maxima (Rimu)	cmawcgB710
ClCG08G009370	CmoCh05G009970	Cucurbita moschata (Rifu)	cmowcgB714
ClCG08G009370	Lsi08G007880	Bottle gourd (USVL1VR-Ls)	lsiwcgB438
ClCG08G009370	Cp4.1LG11g07940	Cucurbita pepo (Zucchini)	cpewcgB123
ClCG08G009370	CsGy6G018090	Cucumber (Gy14) v2	cgybwcgB454
ClCG08G009370	MELO3C026533.2	Melon (DHL92) v3.6.1	medwcgB289
ClCG08G009370	Carg21880	Silver-seed gourd	carwcgB0205
ClCG08G009370	CsaV3_6G031500	Cucumber (Chinese Long) v3	cucwcgB514

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G009370	Cucurbita maxima (Rimu)	cmawcgB175
ClCG08G009370	Cucurbita moschata (Rifu)	cmowcgB166
ClCG08G009370	Cucurbita pepo (Zucchini)	cpewcgB756
ClCG08G009370	Silver-seed gourd	carwcgB0129
ClCG08G009370	Silver-seed gourd	carwcgB0342