ClCG05G019790 (gene) Watermelon (Charleston Gray)

NameClCG05G019790
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 32027733 .. 32029878 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAGCAAAAAGCGAAGAAACTTGCGAAATTTTTTGTCTAACTTGTGAAAAAGTAATCCTAATCTTCTCTGTTCAAAAGGGTTTTGTAAGCTTTTTGAAATCTTTCACATGATTGCTGAGCCACTTTAATCATGAACCCCAATTTCCTCAGTCTCAGCCCCAAAAATGGTCCTGAATTGCTTGTCCATGCCGTCACACGGGCGGCTGAAAGCCCTCTGCCACCGCGCACTCGTGCGCGCTTGACGCAAATTCAAAAGCCCTTTTGTGAGTTGAATCTTTCTCTCTCTTTCTTTATGCACTTTTATCTGTTTCTGCAATTGAATTTTTCTCCATGATTGTTGAAAAGACTGAGAACCCTTTACGTGTGGGACTACTGATCACTGGGTTGTGATATGATCAGGTGGGGTTCTTTATATTCTATGAAATTGGCCAATCAGGCAGCTATATCTCATCATCATCATCATCATCAATCTCTGTATTTTTTTGATGGTTCAGTTAGAGTTCAAAGGATCTAAGTTGATTAGAGTTTTTGAGTGGACTTTTGAATTATTGTTATCTCTTTCTATTATGGTACTTTCGGTTTTGAGTTGGGAGGTGTACTCTTTTTGAATTCTGTGGCTATGGTTTTGTTGGACTCACTTGCAAAACCCATTCCATTCTGTCCCCACTCTGAAATCTGATTCAAGCTCTTTTTCCACAAACTCGAAATTTGTTTGAGATCAATCTCTTTTATCGTGGGGTAAGTTCTTATGAGCATTTTCCTTTGCCCTGGTGAATTTCTTATGAAGCTTCACTTTCAATTTTACTCAGCAACTGAGTGATTGAATTCATAATGTTAAGAGTAAGATAATGATGATGATGATGAGAAAGAGATAGACGTGGGGAAGGGGGAAAGGGTTCTGTGGTATGTCAATTCTAGGACAAGTTTGGATATGGAAATGCCAATTTTTAGCCTCAACTTTATGAAATATTTTGAAGTTTTTCCAATTGAATTTCTGAAATATTCTTACTGTTAAGTTTTAATTGAACAGTGAAACCTATCTGTCTTAAAGTATGAGCTATGAGATAGGACATATTAAGAGTAAACAACCTTTCTAGCATTGCGGTTCCTCTCAAAAGCCCGTAGCTTTTTCATAGCATTGTCAGCAAAGCAACTGAAAATAATCTCTTTATGTTCTGTTCTGTTATGTTCTTCATTTATTGATTCTGAATGGTTCATTCAATTTTTTGTACTAATAACACATGAAACATCATAATCTATGCCCAAGCCAACGAGGTTATTAAAATTATTATACTTCACAATCAAGAATCGTATATTAAGAACAATTAATCATTGGCCTTTTTACACTAAATACCAACTTCATTTCTTTGAGCTTTTGGAAGCCATGCAGAGGAGTTGAAATCATTGACGACTCTCTCTCTCTCTGGATATTTTACAGGAATCCGAATTCGCAAGTAAAGAAGATTTACTGTTAATATCAGCTCTTGACGTTGGCTTTATCTTCTTTAGCAATGGAGTTCTTGCAGTGAGCAATGGCAGCTTGAATTGCAGACTGCAACTCTTCCATGGTGCTATCACTTGTAGAAGAAGTCATAGATGGAGTTGCAACGAGAAGGCCACTATTTGTTGGGGATGTCCTCATGGATGCTGGTGCTGAGAATTCTCCTCTTCTTCCTCGCAATTCTTGCCTGTGTCGCGGATTCAAATTACCTGAAAACGAATAAGCTTGTCGACGTATGTGCAAGTTCTCTTTCCTCCATCTGAAGAACAATGGCCTGACCACTCTTGCATATCGTTTTAGAACTTGACTAACATCAAATCCCAGCTTCCTCTTATGCTTTGCTTTATCTTCTTGCTCGGTAATCTCGCACCCTTTTCGCCATTTTGCAAATCCAAAAAATGAGAAAGGCTTAGATTTGGTTCTCCCACCTGTTTCAATAGGTTCAGTTTCCTGGTGCTTGGTGCTGCTGGTGCTGCAACTTGAGCTGTCTTTGAGGGGCTCTTCACTGTCCCAAATCTCTTTGATTGGGATGGTGAAGCTGTCCATGGAATTGGTGGAGGAGCGAGGCGAAGAAGGAAGGTGGGAGAGGAGATGAAGGGGAAGCAAGTGGCCATGGAAGAAGATGTCATCTGCAGGAGATAA

mRNA sequence

CAAAAAGCAAAAAGCGAAGAAACTTGCGAAATTTTTTGTCTAACTTGTGAAAAAGTAATCCTAATCTTCTCTGTTCAAAAGGGTTTTGTAAGCTTTTTGAAATCTTTCACATGATTGCTGAGCCACTTTAATCATGAACCCCAATTTCCTCAGTCTCAGCCCCAAAAATGGTCCTGAATTGCTTGTCCATGCCGTCACACGGGCGGCTGAAAGCCCTCTGCCACCGCGCACTCGTGCGCGCTTGACGCAAATTCAAAAGCCCTTTTGAATCCGAATTCGCAAGTAAAGAAGATTTACTGTTAATATCAGCTCTTGACGTTGGCTTTATCTTCTTTAGCAATGGAGTTCTTGCAGTGAGCAATGGCAGCTTGAATTGCAGACTGCAACTCTTCCATGGTGCTATCACTTGTAGAAGAAGTCATAGATGGAGTTGCAACGAGAAGGCCACTATTTGTTGGGGATGTCCTCATGGATGCTGGTGCTGAGAATTCTCCTCTTCTTCCTCGCAATTCTTGCCTGTGTCGCGGATTCAAATTACCTGAAAACGAATAAGCTTGTCGACGGGCTCTTCACTGTCCCAAATCTCTTTGATTGGGATGGTGAAGCTGTCCATGGAATTGGTGGAGGAGCGAGGCGAAGAAGGAAGGTGGGAGAGGAGATGAAGGGGAAGCAAGTGGCCATGGAAGAAGATGTCATCTGCAGGAGATAA

Coding sequence (CDS)

ATGGAGTTGCAACGAGAAGGCCACTATTTGTTGGGGATGTCCTCATGGATGCTGGTGCTGAGAATTCTCCTCTTCTTCCTCGCAATTCTTGCCTGTGTCGCGGATTCAAATTACCTGAAAACGAATAAGCTTGTCGACGGGCTCTTCACTGTCCCAAATCTCTTTGATTGGGATGGTGAAGCTGTCCATGGAATTGGTGGAGGAGCGAGGCGAAGAAGGAAGGTGGGAGAGGAGATGAAGGGGAAGCAAGTGGCCATGGAAGAAGATGTCATCTGCAGGAGATAA

Protein sequence

MELQREGHYLLGMSSWMLVLRILLFFLAILACVADSNYLKTNKLVDGLFTVPNLFDWDGEAVHGIGGGARRRRKVGEEMKGKQVAMEEDVICRR
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G019790.1ClCG05G019790.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score:

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G019790CmoCh01G019080Cucurbita moschata (Rifu)cmowcgB412
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G019790Silver-seed gourdcarwcgB0104
ClCG05G019790Silver-seed gourdcarwcgB0175
ClCG05G019790Silver-seed gourdcarwcgB0748
ClCG05G019790Cucumber (Chinese Long) v3cucwcgB150
ClCG05G019790Cucumber (Chinese Long) v3cucwcgB326
ClCG05G019790Watermelon (97103) v2wcgwmbB229
ClCG05G019790Watermelon (97103) v2wcgwmbB243
ClCG05G019790Wax gourdwcgwgoB452
ClCG05G019790Wax gourdwcgwgoB479
ClCG05G019790Watermelon (Charleston Gray)wcgwcgB166
ClCG05G019790Cucumber (Gy14) v1cgywcgB194
ClCG05G019790Cucumber (Gy14) v1cgywcgB406
ClCG05G019790Cucurbita maxima (Rimu)cmawcgB021
ClCG05G019790Cucurbita maxima (Rimu)cmawcgB160
ClCG05G019790Cucurbita maxima (Rimu)cmawcgB411
ClCG05G019790Cucurbita maxima (Rimu)cmawcgB702
ClCG05G019790Cucurbita moschata (Rifu)cmowcgB015
ClCG05G019790Cucurbita moschata (Rifu)cmowcgB149
ClCG05G019790Cucurbita moschata (Rifu)cmowcgB707
ClCG05G019790Wild cucumber (PI 183967)cpiwcgB144
ClCG05G019790Wild cucumber (PI 183967)cpiwcgB327
ClCG05G019790Cucumber (Chinese Long) v2cuwcgB140
ClCG05G019790Cucumber (Chinese Long) v2cuwcgB310
ClCG05G019790Melon (DHL92) v3.5.1mewcgB287
ClCG05G019790Melon (DHL92) v3.5.1mewcgB480
ClCG05G019790Watermelon (97103) v1wcgwmB273
ClCG05G019790Watermelon (97103) v1wcgwmB285
ClCG05G019790Cucurbita pepo (Zucchini)cpewcgB113
ClCG05G019790Cucurbita pepo (Zucchini)cpewcgB509
ClCG05G019790Cucurbita pepo (Zucchini)cpewcgB700
ClCG05G019790Cucurbita pepo (Zucchini)cpewcgB738
ClCG05G019790Bottle gourd (USVL1VR-Ls)lsiwcgB287
ClCG05G019790Bottle gourd (USVL1VR-Ls)lsiwcgB431
ClCG05G019790Cucumber (Gy14) v2cgybwcgB131
ClCG05G019790Cucumber (Gy14) v2cgybwcgB290
ClCG05G019790Melon (DHL92) v3.6.1medwcgB278
ClCG05G019790Melon (DHL92) v3.6.1medwcgB474