Carg15264 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAACGCCGAAGTAAAATCCCAAAACCCTGAGGAACTAAGATATAAAACCTCAAAAGCCGGGAATCGGTCGAGCCTCAAGCTGCCGGATCCAGTTCGCCTGAACGCTGAAGCTACTTCCCGACTCTGAAGTCGAAATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGAGCGTCACGTTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCGTAAAACTTCGATAACTTTTAAGATCCTTTTATGTCCTCTCTCTCAATTTCTCCGATTTACTACGTGATTCTCACGAGTCGTGTTTTTGTGGGTTTCTCCAGTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTCGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGTATTTCATATTTGCTCCTCTGCATCGCTTCATGTTCCTGACTCCAATGTTGTTATTGATATTTTGATTTTTTTTTTTTTTAACCTCCCTGTTTGTAGGCTTTGAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGTTAGTTTTAGATTGCATATCTGGTAGTCTAAACATCAATTATTGGGTTGTTGTTTTCTCATAGTTCTGTTCACAAAACTAGTTACAGCCGTATTCTTCAGCTAGCGCTGTTGGTTATTTTTTTTTTTTTTTTTTAAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTACGCTTCTTCATTTGTTGATGATCCTTAAATATGGAATTCACATTTCTATTATTCTTATAATTCCCTAAAATCCCATAAAAGGACAGCTCAATGGTAGGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTAAGATGAAATTTTTGACTGCTGTCAATGTATCTTGCATGTTGATGGAGAAGGCCATCATTCATCACAGACATAGATGAAAATATGTGCTCCCCACCCCCCCCCCCCCCCCCCCCCAAAATGAATTCTAGGGAGGTTTCACTGTCACATGAACATGGTCCAATGTGTTTTTGTATGGTTAGGCTGTTTAAATCTCATTTTGTATTAGAAATTCATGGTTACAAGCTTACAGTTGGAAGTGTTAGACAACATTCAAATGCAATAGATAAATGGGGGAATATTAAGTCTAAGATTAAGAAATCTGCTGTACCACTTCAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGGTAAGGGTTTGTTTCATTTTTTCCACCAGCGATAAAGGTATAATCTTGAACTTAGTCATTAATTCTTGTTGTAATGATTGTTTTGATTTCTTGCTTTGTCCGAATTTTGTTACAGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGATAACGGTACTTCTTTCATATTTAATTTTACTTACTAAATGTTATCTTAGAATTTCCTTGATGCTTATGTTGTTACTATTCATCCTTTCAAATCATTCTTTATGCGTATGTGTTGTGCTTTTCAACTTCAAAATGTGGACAATCTCTTCTCATATGCGTGCCATATGTGATATAACTAGTTGCGAGCAAATATCTTAAGAAATTCAACTTTCCATATGTTATTTGGTGCTACTGCTACTTTCATTGTTGGAGGCATGATACTCTATAACCATGTAATATGTTTTTATACATTCTTCTTGGCAATCTAACATCTTATTGACGCAAACACAGGGGGAAAATATATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATTGGAGTGTTGGCCACTAATAGTGAGTTCCTTTTTCAAAAATTAATTAATTAATTAATTATTATTGATGTTGTTTTTTATATAACCATGAGTGTTAGGGCCAACTTGCGCACCTCAACAATATGCCAAAAATATTCACTTTTTTTTTTTTTTTTTTTTGCACGTGAGAGTAAAAAACAGTATGGTTTCTTTGGTTTCATTGGTATCAAACAAAAGGGACCTTTCAAGCTATTATATTTTATGCCTTAAAAGACGTTACTGGAGTTTTGGGTGATTATCAGCCTGAGGTTGGTGCTTTTGATGCAAAGCTTAATAGAAAGAAAAGTGGAAACCCTTGATATCTCCTGGTTGTGTTGTAGCACACAGAGTCTGAATTCCTTAAGAAAACTATGCCTCTGGAAATTTACATTATGAATATTGAGAGAGAGATGCTTTGTAGTCTGATTACCATTTTTATGAAACTCCACCTTACAAAGAGCTAGTGCTCACAAGTGCTCATAATTTCTCATGTATCATAATTTTCTTGTTTCAGGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGTCAACCTCATGAATCCTACCTTACAACTACAAGAGGACATGAGTTGTCCGATGGTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGATCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAGCTTGCATCACCCAGCTGAATAGGCCAAATCAGGGTAACTTGTCTTTTTACTATGTAGGGAATTCTCACTCAAAACTAAACTGCCTTGTATGGAGCTCGATCTCCTTACATTTCTTATTCATCTTTCTCTTGACAAAAGGTGTATGGTTGAAATTGAGACAAGCATGCTGGATAGAATCTTAATTGTGAGTTGTTAGATGGTCAGTGAAATAGTTTTGGTTTAAAATGTGTGGCTATCTGCTGATGAGTGATTGTTTGACTTTTGTACCACATTCTTAAAGAAGAAAGGGAAATGTTTTGAAGTCTATACTCCAGAAGTATGAACTGTTACCACAAGTGACTAAGTTACATCGAACTGAACTGATGCAGCTTGGATCAACTAAGATGAAAACAAAGGATCTTTTGGACGTGGTTCCAGTTCACATGAGGCATTAATCCATGGTTTGGTTTGGGCTTTGTTGGTTTTTATTTTTCATTTTTGAAGCATATACTGATATCTTTAAATGAAAAAAGCGCAGGAATT TTTGAAACGCCGAAGTAAAATCCCAAAACCCTGAGGAACTAAGATATAAAACCTCAAAAGCCGGGAATCGGTCGAGCCTCAAGCTGCCGGATCCAGTTCGCCTGAACGCTGAAGCTACTTCCCGACTCTGAAGTCGAAATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGAGCGTCACGTTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTCGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTGAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGATAACGGGGGAAAATATATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATTGGAGTGTTGGCCACTAATAGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGTCAACCTCATGAATCCTACCTTACAACTACAAGAGGACATGAGTTGTCCGATGGTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGATCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAGCTTGCATCACCCAGCTGAATAGGCCAAATCAGGGTAACTTGTCTTTTTACTATGTAGGGAATTCTCACTCAAAACTAAACTGCCTTGTATGGAGCTCGATCTCCTTACATTTCTTATTCATCTTTCTCTTGACAAAAGGTGTATGGTTGAAATTGAGACAAGCATGCTGGATAGAATCTTAATTGTGAGTTGTTAGATGGTCAGTGAAATAGTTTTGGTTTAAAATGTGTGGCTATCTGCTGATGAGTGATTGTTTGACTTTTGTACCACATTCTTAAAGAAGAAAGGGAAATGTTTTGAAGTCTATACTCCAGAAGTATGAACTGTTACCACAAGTGACTAAGTTACATCGAACTGAACTGATGCAGCTTGGATCAACTAAGATGAAAACAAAGGATCTTTTGGACGTGGTTCCAGTTCACATGAGGCATTAATCCATGGTTTGGTTTGGGCTTTGTTGGTTTTTATTTTTCATTTTTGAAGCATATACTGATATCTTTAAATGAAAAAAGCGCAGGAATT ATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGAGCGTCACGTTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTCGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTGAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGATAACGGGGGAAAATATATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATTGGAGTGTTGGCCACTAATAGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGTCAACCTCATGAATCCTACCTTACAACTACAAGAGGACATGAGTTGTCCGATGGTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGATCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAGCTTGCATCACCCAGCTGA MAYAAVSRSSTAAMSVTLAFVSASAILSLYFVTKKSRELGSKVRELEASLAASLKKTIAERQGRIRAQQALRKAVSEPKSDSVECTLYPMAPIGTIQSSFSTRNGTPRQSLVVPLARARLVFSSRIPPASIEGLGEYSHCWVIYVFHLNTNLDKLWKDPSKSKFKAKVKVPRLKGEKVGIFATRSPHRPCPIGITIAKVEAIQGHQILLSGADLVDGTPVLDVKPYLPYCDSIQDATVPKWITGENILSVASICFSEEFTPSLLECWPLIEKKSLYASADELKNFVKQVLSWDIRSLSQRSQPHESYLTTTRGHELSDGSSDSDGHLDETLPSGTSQSSSKIVVYHLLVDGLNVSYTIGCQGDVVVRKVELASPS
BLAST of Carg15264 vs. NCBI nr
Match: XP_022965024.1 (uncharacterized protein LOC111464972 [Cucurbita moschata]) HSP 1 Score: 727.6 bits (1877), Expect = 2.1e-206 Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of Carg15264 vs. NCBI nr
Match: XP_023515484.1 (uncharacterized protein LOC111779629 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 718.8 bits (1854), Expect = 9.8e-204 Identity = 369/375 (98.40%), Postives = 372/375 (99.20%), Query Frame = 0
BLAST of Carg15264 vs. NCBI nr
Match: XP_022988427.1 (uncharacterized protein LOC111485678 [Cucurbita maxima]) HSP 1 Score: 717.2 bits (1850), Expect = 2.8e-203 Identity = 367/375 (97.87%), Postives = 372/375 (99.20%), Query Frame = 0
BLAST of Carg15264 vs. NCBI nr
Match: XP_022134721.1 (uncharacterized protein LOC111006924 [Momordica charantia]) HSP 1 Score: 621.7 bits (1602), Expect = 1.6e-174 Identity = 312/375 (83.20%), Postives = 346/375 (92.27%), Query Frame = 0
BLAST of Carg15264 vs. NCBI nr
Match: XP_004149885.1 (PREDICTED: uncharacterized protein LOC101219357 isoform X1 [Cucumis sativus] >KGN65285.1 hypothetical protein Csa_1G295140 [Cucumis sativus]) HSP 1 Score: 611.3 bits (1575), Expect = 2.2e-171 Identity = 311/375 (82.93%), Postives = 346/375 (92.27%), Query Frame = 0
BLAST of Carg15264 vs. TAIR10
Match: AT4G28020.1 (unknown protein) HSP 1 Score: 398.3 bits (1022), Expect = 5.3e-111 Identity = 199/364 (54.67%), Postives = 271/364 (74.45%), Query Frame = 0
BLAST of Carg15264 vs. Swiss-Prot
Match: sp|Q9BU70|TRMO_HUMAN (tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=2 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 1.2e-32 Identity = 71/151 (47.02%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Carg15264 vs. Swiss-Prot
Match: sp|Q562D6|TRMO_MOUSE (tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV=2) HSP 1 Score: 141.0 bits (354), Expect = 2.8e-32 Identity = 70/150 (46.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Carg15264 vs. Swiss-Prot
Match: sp|Q4V7E0|TRMO_RAT (tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.0e-31 Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of Carg15264 vs. Swiss-Prot
Match: sp|Q9RPT0|RCSF1_PSEAE (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rcsF PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 6.6e-26 Identity = 62/154 (40.26%), Postives = 95/154 (61.69%), Query Frame = 0
BLAST of Carg15264 vs. Swiss-Prot
Match: sp|O68638|RCSF2_PSEAI (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa OX=287 GN=rcsF PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.7e-24 Identity = 59/154 (38.31%), Postives = 93/154 (60.39%), Query Frame = 0
BLAST of Carg15264 vs. TrEMBL
Match: tr|A0A0A0LTM6|A0A0A0LTM6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G295140 PE=4 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 1.5e-171 Identity = 311/375 (82.93%), Postives = 346/375 (92.27%), Query Frame = 0
BLAST of Carg15264 vs. TrEMBL
Match: tr|A0A1S3BW92|A0A1S3BW92_CUCME (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 5.5e-171 Identity = 308/375 (82.13%), Postives = 345/375 (92.00%), Query Frame = 0
BLAST of Carg15264 vs. TrEMBL
Match: tr|A0A1S3BWW3|A0A1S3BWW3_CUCME (uncharacterized protein LOC103494312 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 2.3e-148 Identity = 282/375 (75.20%), Postives = 314/375 (83.73%), Query Frame = 0
BLAST of Carg15264 vs. TrEMBL
Match: tr|A0A1S3BWT2|A0A1S3BWT2_CUCME (uncharacterized protein LOC103494312 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132 Identity = 259/375 (69.07%), Postives = 297/375 (79.20%), Query Frame = 0
BLAST of Carg15264 vs. TrEMBL
Match: tr|A0A251QUP2|A0A251QUP2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G095000 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 2.4e-126 Identity = 236/376 (62.77%), Postives = 293/376 (77.93%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|