Carg05398 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCTTTCCCCTTCCTCTTTCCTTTAGCTCAGAACCACACTCTCAAGCACTTCACTGTCAAGCTTTCTCCTCTTTCCCGTTAGGGTTTCTGTCTTCTTCTTCTTCGTCTTCCTCTTCCCTCTCTCGCTTCCCGCCTTGCTGAAGAACCGCCATGGATAGGTACCAGAAGGTGGAGAAGCCTAAACCTGAATCGCCGATAAACGAAAATGAAATCCGCATCACAAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCTACTCTACTTCAGGTATCATTTCACTGTTTTTGATATTGTTTACATCAGCTATTGTATCTCATTTCATTTTTTCTTTTTGGTGTGTTCGTCTTAATCTTTCTGTTTATACGTTGCGTCTGTTGTTTTTTGAACAATGAATCTATCTTATGACGTTAGGTTTGTGGATGCACTGGACTATTAGAAGATTGTCTTGGTTTTGGTTATTTTTTCTTAATGCTAGCCGACATTTATTGATTTGGTACACTTTCTGGTATATTGATTTCGTTTCTTGTACTTGCGAATTTTGAGGAATAGTTGCTCGCTGGCTGATACTCTGCCGTGTATGCATTGTATGTGGAAGCGTCTGTAAGCTTAATGCACGAGCTATGGTACTTCTTAACATGCGATAGCTCGTGAAATGTAATCTGTTCTGTTGATTGTCTACATTCCTTGTAGCTTTTTCTTCTAGCCTATCGTGAATTCTAGTTATATCGATATTTTTTCACTTTACCATATGAAAAGAATAAAGATACGGTTGAATTTATGCTTTATAGTTTATCTTGTATTCTCAGATCGAGTAATTACGCTAATGCAGTGATCATGTGGAGCTTGGTGTTACTGTATTATGTTGACGTGATGTTTGGCTCAGGTTTCTACTATTTGTACACATTTTTTAATATATAAATTTACCATCAAGATACAGCTACGTACTTCTCTTTCTTATAAAAAGAATCAAGTGCACTAGAGTTTATGGTTTACAATGTACTACCAGATCTATTCATTATGCTAATACAATGATCATGGCCAAATTGTCATTTCCTTATTCTTGGCTCACGGGTTTTTTTCAACTTGTTCGTACTATTTTTTTATTTGAAGAAGATAATTATTGATGTTATTCATGGGATCAAGTTTTTGTTATCTATTCAATTAGTAGATCGATTATTTCCTTATTTCTAATCATGCTGGCTAACTTGAGCATAGCTCAACTAGTCATTCATTTGGAGAGAATGAATTCCAGATCTTGGCTTTCGAAGTCCTCTGAGGGCATTTGCAGGAGTTCTTTTTTTAGGATTCTTTGTATACCTTCTCCCCTTCAAGGATCCACTGTGTTTTTTTAGGATTCTTTTTTTTTTTATCTGGAAAGTTTTGCATGGGAGAGTGTATACTGAAGACTGTATCCAAAGGCTTTCCTCCATGGTGTTGTGGCCTCAATAGTGTGTCATTTGTAGAAGATGGGGTGAGGAACTTGACCATTTACTTTACTTGACCCTTGGACTTTTTCTTGCTCGTAATCGAGGTTGTTGTTCGATGTTTGAGGATGTGTTCTTGAATCCTTCTTGTCATGAAAAGAAAGGGTTCTTTGGCAGTCTTATTTTTTGCTCTGTTGTAGGGCATTTGACTTGAGACTTGAGAGAAATAGTAGAATTTTTCGTGGAGTGGAGTGATTTGGGGAGAACTTTTGGATTACGATTAGGCTTAATGTCTCCCTGTGGATCTGCCCTATTGTTTGTGGGCTTGTTTTTTGTTCGCCCTTGTATATCCCTATAATGAAAGCTTGGTTTCTTATAAAAAAAGGTAAAAAAATTAACTATTCATTTGTGTATTGGATTACTAAACTAGTGGCTGGGATTGTCATCTGGGCTAACACCCGCTAGTGCCAAGCCTATTTATGCAAACCAAATTTAGAGAATGATTCAAGCCAGTCTTTCAACTTTTGGTTTTCAAACAAATAGAAACATAACAGATAACTATCATTTTCAATAAAAAAAATTGCTTAAAACAAACGAGAGAGACAGCCCACTTCTCAAGAGAACATTAAATCGATTAAGAGAGGAAGAGAGCTTGGGAGAGATAGTGCAAACATCCTCCCTTTTCAGGAGAGAGAGGAAGAGGAGAATGCTGATTTGAGTGATGAGAGAGGCTTTGTATAGTGTTTGACAGCAAGACCAAGTCCACCATCAAGCATGCTGAGTTTGAGTTAGAGGGTAAAAAGTTCCCAGTGGTATGGCTTTCGAGTGTCGGTTTAGTATAAAATGTGGATTTTTTATGTTAGAAAATCGTGGTTCCTAATAGCCTATTTATAAATTCTCTCTCTCTCTCTCTAATAAAAAGGTTTTTTCTCCCTTGTTTATTCATGTTTCTAAGCATGTGCTTACTGTCGGCTGAGAATGAATCTGTTCTATTTTGGTTTAATATATCACGTTTTCACTTTTTATAGGACAAACGTGTTAGAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAACAGTTTCCATTGCAGAAATTTTAAAGGTTTGAGTCCTTTACATTCTGCAACTGTGCATGTGTAACTTATTTTATAATTAACATGCCAGTTTCATTCTGAAACAGAAGAGAACTCCACAATTGCATCAAGAAACTTCCATCAGCTCAGTAAGCATAATTGATGTATGGGAGCCTATTGAAGAAGGTCTTGTACCGTAAGTTTTAATCTCTAAAAATCTCTGTTAATTGCCTGATGACGTCCTATGCAATTACTGCTGGTTGGTTTCTTTATGCTCATAGTCACGACTTAGCGTTGTTTGGATTGGTACTCTTTAGTTTGCAATTGCAGATTTTCTTACTATTATTGCTGTGGGCATGTAGCTTTAGCATACTCTTCTGCAGATATTTAAGTAATAATGTCTGACATATGATGCAGTGTGGAGATGACTCGACACGTCTCAATGATATCAATTACCCTGTCAAATCGAGAACTAAATAAAGATTCTCCTGGGTAAGATGTGAAAGTCTAATCTG CTCCTTTCCCCTTCCTCTTTCCTTTAGCTCAGAACCACACTCTCAAGCACTTCACTGTCAAGCTTTCTCCTCTTTCCCGTTAGGGTTTCTGTCTTCTTCTTCTTCGTCTTCCTCTTCCCTCTCTCGCTTCCCGCCTTGCTGAAGAACCGCCATGGATAGGTACCAGAAGGTGGAGAAGCCTAAACCTGAATCGCCGATAAACGAAAATGAAATCCGCATCACAAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCTACTCTACTTCAGGACAAACGTGTTAGAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAACAGTTTCCATTGCAGAAATTTTAAAGTGTGGAGATGACTCGACACGTCTCAATGATATCAATTACCCTGTCAAATCGAGAACTAAATAAAGATTCTCCTGGGTAAGATGTGAAAGTCTAATCTG ATGGATAGGTACCAGAAGGTGGAGAAGCCTAAACCTGAATCGCCGATAAACGAAAATGAAATCCGCATCACAAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCTACTCTACTTCAGGACAAACGTGTTAGAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAACAGTTTCCATTGCAGAAATTTTAAAGTGTGGAGATGACTCGACACGTCTCAATGATATCAATTACCCTGTCAAATCGAGAACTAAATAA MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKTVSIAEILKCGDDSTRLNDINYPVKSRTK
BLAST of Carg05398 vs. NCBI nr
Match: XP_022963612.1 (protein FAM98A isoform X3 [Cucurbita moschata]) HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg05398 vs. NCBI nr
Match: XP_023553962.1 (protein argonaute 18-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg05398 vs. NCBI nr
Match: XP_022967311.1 (protein FAM98A-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg05398 vs. NCBI nr
Match: XP_022930955.1 (glycine-rich RNA-binding protein 10-like [Cucurbita moschata]) HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. NCBI nr
Match: XP_023533405.1 (keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. TAIR10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein) HSP 1 Score: 110.9 bits (276), Expect = 4.0e-25 Identity = 55/68 (80.88%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of Carg05398 vs. TAIR10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein) HSP 1 Score: 94.0 bits (232), Expect = 5.0e-20 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of Carg05398 vs. TAIR10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein) HSP 1 Score: 90.5 bits (223), Expect = 5.6e-19 Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of Carg05398 vs. TrEMBL
Match: tr|A0A1S3CN30|A0A1S3CN30_CUCME (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. TrEMBL
Match: tr|A0A1S3C001|A0A1S3C001_CUCME (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. TrEMBL
Match: tr|A0A1S3CMY8|A0A1S3CMY8_CUCME (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. TrEMBL
Match: tr|A0A1S3BYB0|A0A1S3BYB0_CUCME (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg05398 vs. TrEMBL
Match: tr|A0A0A0LE30|A0A0A0LE30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G625120 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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