Carg04067 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCACGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGAGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGATTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGCGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGCGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAAATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTCGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCGCTTTTTCTATCTTGTGCTGGGCTTCTCTCGGCTTTGATTAGCACTCATAAGAACTGGATATCATGCTGAGATAGGTTTCAATTTTACTAGGCTAAATTTTCTGTTTATTTGGGATTCTTTCACAGATCATATGAAACAAATCATACAATAAAGCATAGTTCAAAGGGAATTTGATCCCAAAAGATCTGAGAGCTTGAAACTGTAAGATTTCAGCTTAATCTCTACATGGGCTCTACAGCCATTACCATTAAAATCCTTCAGTTTATCTTGTTGGTAGCTGCCATTTTTATCCAGGGGAAGCTCTCTGATGTGATTATATATATGTTGTTTTCCTGTGCAGAAGTATGAAGATCCATGGCACCTACCAGAGTGTTCATGTTCGGATTGGTTAGTTTCCTTGAATCAAACTCTCCTAGTAGATGATGGATTTAATAGCATATAAGCATGAAATATTTGGAGTTCTGTTGGTTGTTTGAGTAATTTCTTAGAGAACAACCTATTTACACTGAATAAAATTGCACATTTTTATGAAAAGTTGAATGAATTTGAATTGTTTGAAGGAGTTACTGCAGTTTCTATTATGAGCCCAATAGACAAGTTTTATTCTTTTAGATTTGTTTAGGTTCAAATCAATGTTTGATATGTTATGAATTTATAATCCAACCCAATTCATATGATATGATCAATATGTTGTAGCAATTCTAATCTCTGCCTCAGATATATGACTAACATCTGGTAAATTTCTGCTTCATCATTCCTGGTTTGATCACCCTCGGGTAGTTTTCTGCTTCATCTGTAACGATCCAAGCCTACCGCTAGCAGATATTGTTTTTTTGGGTTTTTCCTTTCAGACTTCCCTTTAAGGTTTTTAAAATGCGTCTGCTGGAGAGAGGTTAGGATGTTTCGTTTTCTTCCCAACCGTTGTGGGATCGCACAATCCACCTCTCTTTAGGGCCCAGCGTCCTCGCTAACACTCGTTCCCTTCTCCAATCACTGCCTAGGACCCCTCAATCCACTCCCTTCGAGGCCTAGCATCCTTGTTGGCACACTGTCTTGTGTCTAACCCCCTTGGAAGCTCAGCCTCCTTGCTGTCACATTGTCCGGTGTATAGCTCTAATACCATTTGTAATGGCCCAAGTCAACTGCTAGCAGATATTGGCCTCGACTTTTCCTTTTAGACTTTCCTTCAAGATTTTTAAAATGTCTCTGCTAGAGAAAGGTTTTCACACCCTTATAAAGAATGATTCGTTCTCCTTCCAACCGGTGTGGGATCTCACATCATCATTCTTAGGATCATCAACATTCGGTAGTTTTGTGCTTCATCATTCCTGGTTTCATCAACATTTTGGTAGTTTTCTGCTTCTTCATTCTGGGTTCTTTCACTTTCCATTCCATGATCTTTCCCCTTTTCAATTCTATTGAAAAATTTGCTGAATGTTGAGCACTGAATGGGAGTTGTTGGGATTCTCATGTCTCAGTTTCTGTTCATTTCAACTTCTTCCATAGGTATTCTGCTGAGTTTCTGAGCTCTCCACTCAATTTGATTACTGTAACAAGCTGCTGCAAGCTACTAGAAAACACCAAGTAGATCTTCACGATTGTTCATATTTCTTTTAGTTTGTTTTCATTGATGGATTGTGATTTTAAAGTTGCAATATTTTGTCGACCTTTCATAAGAATTTCAATGTTACTCCAATGGTCGAAGATTGTTTTGTTGGATCTTTTATTTAAGACGTCTGATAATAAGATCATTGATAATCA ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCACGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGAGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGATTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGCGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGCGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAAATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTCGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCGCTTTTTCTATCTTATCCATGGCACCTACCAGAGTGTTCATGTTCGGATTGGTATTCTGCTGAGTTTCTGAGCTCTCCACTCAATTTGATTACTGTAACAAGCTGCTGCAAGCTACTAGAAAACACCAAGTAGATCTTCACGATTGTTCATATTTCTTTTAGTTTGTTTTCATTGATGGATTGTGATTTTAAAGTTGCAATATTTTGTCGACCTTTCATAAGAATTTCAATGTTACTCCAATGGTCGAAGATTGTTTTGTTGGATCTTTTATTTAAGACGTCTGATAATAAGATCATTGATAATCA ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCACGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGAGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGATTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGCGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGCGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAAATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTCGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCGCTTTTTCTATCTTATCCATGGCACCTACCAGAGTGTTCATGTTCGGATTGGTATTCTGCTGAGTTTCTGAGCTCTCCACTCAATTTGATTACTGTAACAAGCTGCTGCAAGCTACTAGAAAACACCAAGTAG MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALHESLPLTQRLKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLIKAGLIDKRYSSRLQKISAWAEFIGYIGSISLKFRDFNQIVEDEARLKASMDIAVSKGNGNREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSYPWHLPECSCSDWYSAEFLSSPLNLITVTSCCKLLENTK
BLAST of Carg04067 vs. NCBI nr
Match: XP_022950993.1 (peroxisomal membrane protein 11A-like [Cucurbita moschata]) HSP 1 Score: 438.3 bits (1126), Expect = 1.8e-119 Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0
BLAST of Carg04067 vs. NCBI nr
Match: XP_023002137.1 (peroxisomal membrane protein 11A-like [Cucurbita maxima] >XP_023002138.1 peroxisomal membrane protein 11A-like [Cucurbita maxima]) HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117 Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of Carg04067 vs. NCBI nr
Match: XP_023537452.1 (peroxisomal membrane protein 11A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.1 bits (1089), Expect = 3.6e-115 Identity = 219/229 (95.63%), Postives = 224/229 (97.82%), Query Frame = 0
BLAST of Carg04067 vs. NCBI nr
Match: XP_004152708.1 (PREDICTED: peroxisomal membrane protein 11A [Cucumis sativus] >KGN62580.1 hypothetical protein Csa_2G361460 [Cucumis sativus]) HSP 1 Score: 383.3 bits (983), Expect = 7.0e-103 Identity = 192/230 (83.48%), Postives = 215/230 (93.48%), Query Frame = 0
BLAST of Carg04067 vs. NCBI nr
Match: XP_022144177.1 (peroxisomal membrane protein 11A [Momordica charantia]) HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102 Identity = 194/229 (84.72%), Postives = 213/229 (93.01%), Query Frame = 0
BLAST of Carg04067 vs. TAIR10
Match: AT1G47750.1 (peroxin 11A) HSP 1 Score: 282.3 bits (721), Expect = 3.0e-76 Identity = 142/230 (61.74%), Postives = 185/230 (80.43%), Query Frame = 0
BLAST of Carg04067 vs. TAIR10
Match: AT3G47430.1 (peroxin 11B) HSP 1 Score: 95.5 bits (236), Expect = 5.3e-20 Identity = 65/202 (32.18%), Postives = 106/202 (52.48%), Query Frame = 0
BLAST of Carg04067 vs. TAIR10
Match: AT1G01820.1 (peroxin 11c) HSP 1 Score: 45.4 bits (106), Expect = 6.2e-05 Identity = 52/209 (24.88%), Postives = 94/209 (44.98%), Query Frame = 0
BLAST of Carg04067 vs. Swiss-Prot
Match: sp|Q9FZF1|PX11A_ARATH (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana OX=3702 GN=PEX11A PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 5.5e-75 Identity = 142/230 (61.74%), Postives = 185/230 (80.43%), Query Frame = 0
BLAST of Carg04067 vs. Swiss-Prot
Match: sp|A2XFQ8|PX113_ORYSI (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50 Identity = 107/216 (49.54%), Postives = 153/216 (70.83%), Query Frame = 0
BLAST of Carg04067 vs. Swiss-Prot
Match: sp|Q10MN2|PX113_ORYSJ (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50 Identity = 107/216 (49.54%), Postives = 153/216 (70.83%), Query Frame = 0
BLAST of Carg04067 vs. Swiss-Prot
Match: sp|Q10MN3|PX112_ORYSJ (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-2 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.8e-41 Identity = 100/242 (41.32%), Postives = 148/242 (61.16%), Query Frame = 0
BLAST of Carg04067 vs. Swiss-Prot
Match: sp|Q01IH3|PX114_ORYSI (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-4 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-23 Identity = 67/202 (33.17%), Postives = 117/202 (57.92%), Query Frame = 0
BLAST of Carg04067 vs. TrEMBL
Match: tr|A0A0A0LL07|A0A0A0LL07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361460 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 4.6e-103 Identity = 192/230 (83.48%), Postives = 215/230 (93.48%), Query Frame = 0
BLAST of Carg04067 vs. TrEMBL
Match: tr|A0A1S3BAF5|A0A1S3BAF5_CUCME (peroxisomal membrane protein 11A OS=Cucumis melo OX=3656 GN=LOC103487951 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102 Identity = 190/230 (82.61%), Postives = 215/230 (93.48%), Query Frame = 0
BLAST of Carg04067 vs. TrEMBL
Match: tr|V4V7W2|V4V7W2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002211mg PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 4.6e-87 Identity = 167/229 (72.93%), Postives = 200/229 (87.34%), Query Frame = 0
BLAST of Carg04067 vs. TrEMBL
Match: tr|W9SHI0|W9SHI0_9ROSA (Peroxisomal membrane protein 11A OS=Morus notabilis OX=981085 GN=L484_021204 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 6.0e-87 Identity = 166/227 (73.13%), Postives = 200/227 (88.11%), Query Frame = 0
BLAST of Carg04067 vs. TrEMBL
Match: tr|A0A2I4F4R2|A0A2I4F4R2_9ROSI (peroxisomal membrane protein 11A OS=Juglans regia OX=51240 GN=LOC108995520 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.3e-86 Identity = 167/229 (72.93%), Postives = 197/229 (86.03%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |