Carg03559 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03559
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	G patch domain-containing protein 11
Location	Cucurbita_argyrosperma_scaffold_006 : 686925 .. 689428 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGAGCGTACTCTTTGGCGGCAATGAAGACGATGAAGTTTTTGCAATTGTTGGAAGTTGATGAGATGGCGTCCACGTCGGCTGAAACGGTTACGAATTTATATGTGTTTTCTAAATAAAAGAGTTTTTTAATGATATTCTTTTTTTAAAAGAGGGTCCAAATAGCGGTAAATTATTTTACGTTCCAGAGGTCACGAGCTATGGCGGAATCAGCTTTCAAGCAATCCAACGAACCAGACGATGGAGAAGAAGATTACATGGGCGACCTTTCTAAGTTGCTTCCTCCTGAAGTTACTAGCTCTTCCAAATCCATGTCCAAGAAGGTAAGGTCTGCTGGCTTTGCTTTGTTCTTCAGCTAATCGATAAATTCTAGGGCTAGTTACTCCATTAGTTTCTTGGACTTAAAATCAAATTTAATTGCAGCTTCCTGCTAATAAAACCCCTGCTGTTCAAACGTCGATTAAGAAGCCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAATTCGAAGAGGATGAACAGACATTGGCGAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAGTTGTTGAAGCAAATGGGGTACACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCGGGACTGGCAGAGCCCGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCCGCCAAGATCCGATTAAAGAGAAGAAGAAGCAAGAAGTTATAAGATCTGAGAGAAAGAGGAACCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGCTGCAGTGGCGAAGTCGAAGAATTGTGGTCAATTACCACAAGGCGAAGGCAGCACTTGATCAGCTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGAAGGACGATGAGGAGGAAGGAGATGAGGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGTATAATTCTATTCTGAAAGTTCTACCACCCTCCTTAATTTCTTGTAAAGTTCTCTCTTTGGTAGGTTAGTAGGTTAGGAATCACAGTGGTATGATATTGTTCGATATTGTCCACTTTGAGCATAAGCTCTCATGATTTTGCTTTTGGTTTTCCTGAAAGACTTTATACTAACGAAGATGTATTTCTTATAAATCCATGATCAACCCCTAATCAATGGATGTGTGACTCTTCTCCCAACAATCTTCAACAGTCCTCCCCTCGAACAAAGTACACCATAGAGCCTCCATTGAGGCCTATGGAGCCTTTGAATAGCCTCCCCTTAATCAAGACTCGACTCCTTCTTTGGAGCCCTCGAACAAAATACACCATTTTTTCGACAGTCACTTTTGACTACACCTTTGAGGCTCACGACTTTTTTGTTCGACATTGGAGAATTCTATTGACATGGTTAAGTTAAGGGCATGACTCTGATACCATGTTAGGAATCACGATTCTCCACAATTGTATGATATTGTCCACTTTGAGCATAAGTTCTCGTGGTTTTGCTTTTGGTTTCCCCACAAGGCTTCGTACCAATGGAGATGTATTCCTTATAAACCCATGATCAACCCCTTAATTAGCCGATGTGAGACTCCTCTCCGGGTAGGATCAATCTTTCATTTTTATGTTATATAAAGCTTCTCTTTCATTTTTTGATTCAAGATTAAAATGAATTGCTGTCTGCCATTTGTTAGACTACTCTGCTATTTCAAAGTCGAGCTCTATTAATTGGAACCCTGTGGTGGACATTTGCGAAGAAAGATCAAATAAGACAAATATTTAAGAAGAAATGAAATTTCTCATGCTGGAATTTTTTAGGCACACCATCTCTCAAATCTCTTCTTTTGTCCACTCCACATATTTGATTCAACTACACCACCTCCTGTATATTTATTTACTCTGAAAAGAAACAATTTCATTATTAAATGTTAAGGTACAAGAGGGAGAGACCCAGGGCAAGTAGGTATAAAAAGAAGAAATAGGAAGTTACACATTTCAGATGCTTCACCCTGCTCCCAAAAGCTGTCATTTCCACAATTCCATTAACCTTAGCTTTTAGCTCAAATTCTGGAGTCAAGTTAGTTTTCAATGTCTTTTAGGTGATGTTCCTATTTCTGACCCATACCCTGCTTCTTAGGCTGTTACTCATTATTCACATGATATATATGTATATAGATAGATATGGATATAGATATATAATTTGTGTTATTTCTGGTGTGAACGTGCTTGCTGGGGAATTGGTATAACATAGGTCTGTGATTGATGCAGGATTTGGAGAGTATTTTGATTAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGGTGAGTGTATTGCACCAATCTTTTGAGACAATAGTTCAAGATTGACTTGTATGTTATGCTAAACCTGAATCCTCCTTTTCTTAACATCATTCTGCTGTTCATTGCAGTACGACTCGAAAGAGTTGCTCCTATCTAACTGCCCTGGAATTAATGAAGATGATCACTGA

mRNA sequence

CAAATGAGCGTACTCTTTGGCGGCAATGAAGACGATGAAGTTTTTGCAATTGTTGGAAGTTGATGAGATGGCGTCCACGTCGGGTTCCAGAGGTCACGAGCTATGGCGGAATCAGCTTTCAAGCAATCCAACGAACCAGACGATGGAGAAGAAGATTACATGGGCGACCTTTCTAAGTTGCTTCCTCCTGAAGTTACTAGCTCTTCCAAATCCATGTCCAAGAAGCTTCCTGCTAATAAAACCCCTGCTGTTCAAACGTCGATTAAGAAGCCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAATTCGAAGAGGATGAACAGACATTGGCGAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAGTTGTTGAAGCAAATGGGGTACACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCGGGACTGGCAGAGCCCGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCCGCCAAGATCCGATTAAAGAGAAGAAGAAGCAAGAAGTTATAAGATCTGAGAGAAAGAGGAACCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGCTGCAGTGGCGAAGTCGAAGAATTGTGGTCAATTACCACAAGGCGAAGGCAGCACTTGATCAGCTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGAAGGACGATGAGGAGGAAGGAGATGAGGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGAGTATTTTGATTAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCGAAAGAGTTGCTCCTATCTAACTGCCCTGGAATTAATGAAGATGATCACTGA

Coding sequence (CDS)

ATGGCGGAATCAGCTTTCAAGCAATCCAACGAACCAGACGATGGAGAAGAAGATTACATGGGCGACCTTTCTAAGTTGCTTCCTCCTGAAGTTACTAGCTCTTCCAAATCCATGTCCAAGAAGCTTCCTGCTAATAAAACCCCTGCTGTTCAAACGTCGATTAAGAAGCCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAATTCGAAGAGGATGAACAGACATTGGCGAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAGTTGTTGAAGCAAATGGGGTACACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCGGGACTGGCAGAGCCCGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCCGCCAAGATCCGATTAAAGAGAAGAAGAAGCAAGAAGTTATAAGATCTGAGAGAAAGAGGAACCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGCTGCAGTGGCGAAGTCGAAGAATTGTGGTCAATTACCACAAGGCGAAGGCAGCACTTGATCAGCTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGAAGGACGATGAGGAGGAAGGAGATGAGGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGAGTATTTTGATTAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCGAAAGAGTTGCTCCTATCTAACTGCCCTGGAATTAATGAAGATGATCACTGA

Protein sequence

MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTFNWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLENKEVVEPEKKDDEEEGDEEEEEEEIITEEDLESILIKLRDEHRYCLFCGYQYDSKELLLSNCPGINEDDH

Homology

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BLAST of Carg03559 vs. NCBI nr
Match: XP_022935377.1 (G patch domain-containing protein 11 [Cucurbita moschata])

HSP 1 Score: 447.6 bits (1150), Expect = 2.9e-122
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF
Sbjct: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
           NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG
Sbjct: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDSKELLLSNCPGINEDDH
Sbjct: 241 YQYDSKELLLSNCPGINEDDH 261

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BLAST of Carg03559 vs. NCBI nr
Match: XP_022983073.1 (G patch domain-containing protein 11 [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 1.6e-120
Identity = 258/261 (98.85%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAESAFKQSNEPDDGE+DYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF
Sbjct: 1   MAESAFKQSNEPDDGEDDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
           NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLR+EHRYCLFCG
Sbjct: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLREEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDS ELLLSNCPGINEDDH
Sbjct: 241 YQYDSIELLLSNCPGINEDDH 261

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BLAST of Carg03559 vs. NCBI nr
Match: XP_023527963.1 (G patch domain-containing protein 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.4 bits (1134), Expect = 2.1e-120
Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAESAFKQSNEPDDGE+DYMGDLSKLLPPEVTSSSKSMSKKLPANK PAVQTSIKKPKTF
Sbjct: 1   MAESAFKQSNEPDDGEDDYMGDLSKLLPPEVTSSSKSMSKKLPANKAPAVQTSIKKPKTF 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
           NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG
Sbjct: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDS ELLLSNCPGINEDDH
Sbjct: 241 YQYDSIELLLSNCPGINEDDH 261

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BLAST of Carg03559 vs. NCBI nr
Match: XP_022159391.1 (G patch domain-containing protein 11 [Momordica charantia])

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 225/263 (85.55%), Postives = 244/263 (92.78%), Query Frame = 0


Query: 1   MAESAFKQSNEPD--DGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPK 60
           MAESAFKQ+NEPD  + EEDYMGDLSKLLP E T+SS+S+S+K PAN+T AV++S KKPK
Sbjct: 1   MAESAFKQTNEPDNEEEEEDYMGDLSKLLPVEDTTSSRSLSRKFPANRTSAVESSKKKPK 60

Query: 61  TFNWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLA 120
           TFNWQEQRR DRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGK GSGLA
Sbjct: 61  TFNWQEQRRLDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKGGSGLA 120

Query: 121 EPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVV 180
           EPVGLEIRRSRAGIGR+DPIKEKKKQE  R++ KR+HQEALMEEFGSRQKLQWRSRRIVV
Sbjct: 121 EPVGLEIRRSRAGIGREDPIKEKKKQEEFRAQTKRSHQEALMEEFGSRQKLQWRSRRIVV 180

Query: 181 NYHKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLF 240
           NY KAKAALDQLENKE+   XXXXXXXXXXXXXXXXXXXXXXXLE +L+KLRDEHRYC+F
Sbjct: 181 NYKKAKAALDQLENKEIVEPXXXXXXXXXXXXXXXXXXXXXXXLEDVLMKLRDEHRYCVF 240

Query: 241 CGYQYDSKELLLSNCPGINEDDH 262
           CGYQYDS ELL+SNCPGI+EDDH
Sbjct: 241 CGYQYDSMELLISNCPGISEDDH 263

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BLAST of Carg03559 vs. NCBI nr
Match: XP_008443073.1 (PREDICTED: G patch domain-containing protein 11 [Cucumis melo])

HSP 1 Score: 344.4 bits (882), Expect = 3.5e-91
Identity = 211/261 (80.84%), Postives = 225/261 (86.21%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAESAF+Q+NEPDD EEDYMGDLSKLLPPE T+SSKS+ +K+ ANKTP VQ+S KKPKTF
Sbjct: 1   MAESAFRQTNEPDDEEEDYMGDLSKLLPPEDTTSSKSIFRKVAANKTPVVQSSNKKPKTF 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
           N                  QTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  NXXXXXXXXXXXXXXXXXXQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGR DPIKEK KQE IR+E+KR+HQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRLDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           +KAKAALDQLENKEV    XXXXXXXXXXXXXXXXXXXXXX   IL+KLRDEHRYCLFCG
Sbjct: 181 NKAKAALDQLENKEV-VEPXXXXXXXXXXXXXXXXXXXXXXXXXILMKLRDEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDS + LLSNCPGI+EDDH
Sbjct: 241 YQYDSMDSLLSNCPGISEDDH 260

[Close]

BLAST of Carg03559 vs. TAIR10
Match: AT3G57910.1 (D111/G-patch domain-containing protein)

HSP 1 Score: 240.7 bits (613), Expect = 9.9e-64
Identity = 158/249 (63.45%), Postives = 194/249 (77.91%), Query Frame = 0


Query: 16  EEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTFNWQEQRRRDRERKQF 75
           +++YMGDLS+ +P E++ +SK   +K    KT  V+ S KK K  NW E+RR ++ERKQ 
Sbjct: 20  DDEYMGDLSQFIPQELSQTSK---RKESEKKTVIVEPSRKKLKNLNWHERRRLEKERKQI 79

Query: 76  EEDEQTLARI-EAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGR 135
           EEDEQTLARI + PI +SNIGFKLLKQMGY PG+ALGK+GSG AEPV ++IRRSRAG+GR
Sbjct: 80  EEDEQTLARIVDTPIGESNIGFKLLKQMGYKPGSALGKQGSGRAEPVTMDIRRSRAGVGR 139

Query: 136 QDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLENKE 195
           +DP KE                + ++E+FGSRQK QWR +R+++N+ KAKAALDQLEN E
Sbjct: 140 EDPHKEXXXXXXXXXXXXXRKVDEMLEDFGSRQKSQWRKKRVLINFRKAKAALDQLENVE 199

Query: 196 V--XXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCGYQYDSKELLLSN 255
           V  XXXXXXXXXXXXXXXXXXXXXXXXXXL+ IL+KLR EH YCLFCG+QY++ E LLSN
Sbjct: 200 VVPXXXXXXXXXXXXXXXXXXXXXXXXXXLQEILMKLRAEHWYCLFCGFQYETTEALLSN 259

Query: 256 CPGINEDDH 262
           CPG+NEDDH
Sbjct: 260 CPGVNEDDH 265

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BLAST of Carg03559 vs. TAIR10
Match: AT3G54230.2 (suppressor of abi3-5)

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 86  EAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQ 136
           E  I +SN+G ++L+ MG+  G+ LGK+GSG+ EPV  +    RAG+G Q
Sbjct: 924 ERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQ 973

[Close]

BLAST of Carg03559 vs. TAIR10
Match: AT5G08535.1 (D111/G-patch domain-containing protein)

HSP 1 Score: 43.1 bits (100), Expect = 3.0e-04
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 92  SNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEK 142
           SNIGF+LLK+ G+  G  LG    G+  P+  E + ++ G+G + P K K
Sbjct: 42  SNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAKRK 91

[Close]

BLAST of Carg03559 vs. Swiss-Prot
Match: sp|Q3UFS4|GPT11_MOUSE (G patch domain-containing protein 11 OS=Mus musculus OX=10090 GN=Gpatch11 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 9.6e-16
Identity = 79/191 (41.36%), Postives = 105/191 (54.97%), Query Frame = 0


Query: 93  NIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERK 152
           N GF LL++MGY  G ALGK G G+ EP+ L ++  ++GIG +  +K K ++ +    RK
Sbjct: 71  NKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHESSLKRKAEERLENYRRK 130

Query: 153 ---RNHQEA-LMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLE---------------NK 212
              +N  EA   EEF  R K +    R+  +  +++ A  QL+                 
Sbjct: 131 IHMKNQNEAKAAEEFRMRLKSKQDEMRLEGDLRRSQRACQQLDAQKNIQVPREAWYWLRP 190

Query: 213 EVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILI---KLRDEHRYCLFCGYQYDSKELLL 262
           E XXXXXXXXXXXXXXXXXXX       LE + I    LR+EH YC++CG  Y+ KE L 
Sbjct: 191 EXXXXXXXXXXXXXXXXXXXXPSEDLSVLEKLQILTGYLREEHLYCIWCGTAYEDKEDLS 250

[Close]

BLAST of Carg03559 vs. Swiss-Prot
Match: sp|Q8N954|GPT11_HUMAN (G patch domain-containing protein 11 OS=Homo sapiens OX=9606 GN=GPATCH11 PE=1 SV=4)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 74/189 (39.15%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 93  NIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERK 152
           N GF LL++MGY  G ALGK G G+ EP+ L I+  ++GIG +  +K +K +E + S RK
Sbjct: 97  NKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLK-RKAEEKLESYRK 156

Query: 153 RNH-----QEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLENKE------------- 212
           + H     +E   E+F  R K +    ++  +  +++ A  QL+ ++             
Sbjct: 157 KIHMKNQAEEKAAEQFRMRLKNKQDEMKLEGDLRRSQRACQQLDVQKNIQVPREAWYXXX 216

Query: 213 --VXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCGYQYDSKELLLSN 262
              XXXXXXXXXXXXXXXXX         L+ +   LR+EH YC++CG  Y+ KE L SN
Sbjct: 217 XXXXXXXXXXXXXXXXXXXXSEDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSSN 276

[Close]

BLAST of Carg03559 vs. Swiss-Prot
Match: sp|Q2KI19|GPT11_BOVIN (G patch domain-containing protein 11 OS=Bos taurus OX=9913 GN=GPATCH11 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 0


Query: 93  NIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERK 152
           N GF LL++MGY  G ALGK G G+ EP+ L ++  ++GIG +  +K +K +E + S R+
Sbjct: 71  NKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHETLLK-RKAEEKLESYRR 130

Query: 153 RNH-----QEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLEN--------------- 212
           + H     +E   E+F  R K +    ++  +  +++ A  QL+                
Sbjct: 131 KIHMKSQAEERAAEQFRIRLKNKQDEMKLEGDLRRSQRACQQLDTQKNIQVPREAWYWLR 190

Query: 213 -KEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCGYQYDSKELLLS 262
            +E XXXXXXXXXXXXXXXXXXX       L+ +   LR+EH YC++CG  Y+ KE L S
Sbjct: 191 PEEEXXXXXXXXXXXXXXXXXXXDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSS 250

[Close]

BLAST of Carg03559 vs. Swiss-Prot
Match: sp|Q6DGZ0|GPT11_DANRE (G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.7e-15
Identity = 74/269 (27.51%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 14  DGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTFNWQEQRRRDRERK 73
           D E+DYM D          +    +   +P  K   V+ +IKK      ++ + R +  K
Sbjct: 3   DDEDDYMSD-------AFLNQISDVRPGVPMVK--RVKEAIKKEALHKEKDIQNRQKSFK 62

Query: 74  QFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIG 133
           + +  E   A +++ I   N GF LL++MGY  G  LGKEG+G  EPV L I+  R GIG
Sbjct: 63  E-QXXESREAALQSSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIG 122

Query: 134 RQDPIKEKKKQEVIRSERKRNH-----QEALMEEFGSRQKLQWRSRRIVVNYHKAKAALD 193
            ++ +K++K  E +++ R++ H     ++  +E+F  R++ +   R+   +  K++ A +
Sbjct: 123 MEE-VKKRKADEELQNYRRKVHMKQHLEKKSIEDFRVRKRTEREERQTQGDLRKSQRACE 182

Query: 194 QLENK-------------EVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILI---KLRDE 253
           QL+N+             EV                          L+ +      LR  
Sbjct: 183 QLDNQKGITVPRDCWYWPEVEKNEESELLEEEIKTEESDEEEELTPLDKLQFLTSYLRGV 242

Query: 254 HRYCLFCGYQYDSKELLLSNCPGINEDDH 262
           H YC++CG  Y+ +E L +NCPG    DH
Sbjct: 243 HYYCIWCGTAYNDEEDLGTNCPGDTAADH 260

[Close]

BLAST of Carg03559 vs. Swiss-Prot
Match: sp|Q6DF57|GPT11_XENTR (G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12
Identity = 84/271 (31.00%), Postives = 135/271 (49.82%), Query Frame = 0


Query: 13  DDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTP-AVQTSIKKPKTFNWQEQRRRDRE 72
           ++ EEDYM D          +   S+    P    P  V+   +K +       + R ++
Sbjct: 2   EEEEEDYMSD----------AFINSLQDVRPGMSMPRRVKECYEKEEKHKEANIKNRQQK 61

Query: 73  RKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAG 132
            K  E++++   ++   +   N GF LL++MGY  G ALGK+G G+ EP+ L I+  R+G
Sbjct: 62  LKDVEKEKRD-TKLNEALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSG 121

Query: 133 IGRQDPIKEKKKQEVIRSER-----KRNHQEALMEEFGSRQKLQWRSRRIVVNYHKAKAA 192
           IG ++ +K++K +E + S R     +++ +E   ++F  R K +    R+  +  K++ A
Sbjct: 122 IGHEE-MKKRKAEENLESYRRKIQMRKHDEEQAADDFRMRMKSKREEIRLKADLSKSQRA 181

Query: 193 LDQLENK----------------EVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLR 252
              L+ +                E   XXXXXXXXXXXXXXXXX       L+ +   LR
Sbjct: 182 CMLLDGQKSISTPREAWYWPKMNEQEAXXXXXXXXXXXXXXXXXELSTLEKLQILTSYLR 241

Query: 253 DEHRYCLFCGYQYDSKELLLSNCPGINEDDH 262
             H +C++CG  Y   E + SNCPG   +DH
Sbjct: 242 GRHLFCIWCGTTYQDDEDMESNCPGDTAEDH 260

[Close]

BLAST of Carg03559 vs. TrEMBL
Match: tr|A0A1S3B6R8|A0A1S3B6R8_CUCME (G patch domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103486779 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.3e-91
Identity = 211/261 (80.84%), Postives = 225/261 (86.21%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAESAF+Q+NEPDD EEDYMGDLSKLLPPE T+SSKS+ +K+ ANKTP VQ+S KKPKTF
Sbjct: 1   MAESAFRQTNEPDDEEEDYMGDLSKLLPPEDTTSSKSIFRKVAANKTPVVQSSNKKPKTF 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
           N                  QTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  NXXXXXXXXXXXXXXXXXXQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGR DPIKEK KQE IR+E+KR+HQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRLDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           +KAKAALDQLENKEV    XXXXXXXXXXXXXXXXXXXXXX   IL+KLRDEHRYCLFCG
Sbjct: 181 NKAKAALDQLENKEV-VEPXXXXXXXXXXXXXXXXXXXXXXXXXILMKLRDEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDS + LLSNCPGI+EDDH
Sbjct: 241 YQYDSMDSLLSNCPGISEDDH 260

[Close]

BLAST of Carg03559 vs. TrEMBL
Match: tr|A0A2C9VDE1|A0A2C9VDE1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G045100 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83
Identity = 191/265 (72.08%), Postives = 225/265 (84.91%), Query Frame = 0


Query: 1   MAESAFKQS----NEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKK 60
           MAES   ++    NE +D EEDYMGDLS+ LPPE ++SSK  +KK+ +NKT AVQ S KK
Sbjct: 1   MAESTMNRTGNVRNEEEDEEEDYMGDLSQFLPPETSNSSKFSAKKITSNKTSAVQPSKKK 60

Query: 61  PKTFNWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSG 120
            KT +WQE+RR +RER Q EEDEQTLA+IEAPIPQSNIGFKLL+QMGY PG+ALGKEGSG
Sbjct: 61  FKTLSWQERRRLERERSQXEEDEQTLAKIEAPIPQSNIGFKLLQQMGYNPGSALGKEGSG 120

Query: 121 LAEPVGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRI 180
            AEPVG+EIRR+R GIGR+DP KEK+K+E + +E K  ++EALM +FGSRQK QWRSRR+
Sbjct: 121 RAEPVGIEIRRTRVGIGREDPHKEKRKREKVEAEMKTRNEEALMADFGSRQKSQWRSRRV 180

Query: 181 VVNYHKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYC 240
           VVN+ KAKAALDQLENKE+  XXXXXXXXXXXXXXXXXXXXXXXXL+ IL+KLRDEHRYC
Sbjct: 181 VVNFRKAKAALDQLENKEIVEXXXXXXXXXXXXXXXXXXXXXXXXLQEILMKLRDEHRYC 240

Query: 241 LFCGYQYDSKELLLSNCPGINEDDH 262
           LFCG+QY++ E LLSNCPG +EDDH
Sbjct: 241 LFCGFQYETMEALLSNCPGTDEDDH 265

[Close]

BLAST of Carg03559 vs. TrEMBL
Match: tr|A0A0A0LGZ2|A0A0A0LGZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809920 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 196/261 (75.10%), Postives = 210/261 (80.46%), Query Frame = 0


Query: 1   MAESAFKQSNEPDDGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTF 60
           MAES F+Q+NEPD+ EEDYMGDLSKLL          + +K+ ANKTP VQ+S       
Sbjct: 1   MAESDFRQTNEPDEEEEDYMGDLSKLLXXXXXXXXXXIFRKVAANKTPVVQSSNXXXXXX 60

Query: 61  NWQEQRRRDRERKQFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120
                               TLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEP 120

Query: 121 VGLEIRRSRAGIGRQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNY 180
           VGLEIRRSRAGIGRQDPIKEK KQE IR+E+KR+HQEALMEEFGSRQKLQWRSRRIVVNY
Sbjct: 121 VGLEIRRSRAGIGRQDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVVNY 180

Query: 181 HKAKAALDQLENKEVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCG 240
           +KAKAALDQLENKEV    XXXXXXXXXXXXXXXXXXXXXXLE IL+KLRDEHRYCLFCG
Sbjct: 181 NKAKAALDQLENKEV-VEPXXXXXXXXXXXXXXXXXXXXXXLEDILMKLRDEHRYCLFCG 240

Query: 241 YQYDSKELLLSNCPGINEDDH 262
           YQYDS + LLSNCPGI+EDDH
Sbjct: 241 YQYDSMDSLLSNCPGISEDDH 260

[Close]

BLAST of Carg03559 vs. TrEMBL
Match: tr|A0A1U8HZQ2|A0A1U8HZQ2_GOSHI (G patch domain-containing protein 11-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107891261 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 8.5e-78
Identity = 182/248 (73.39%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 14  DGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTFNWQEQRRRDRERK 73
           +GEEDYMGDLS+ LPPE +++SK   KK+P +   + Q S KK KT +WQEQR+ +RERK
Sbjct: 15  EGEEDYMGDLSQFLPPEPSNTSKFTLKKIPNSNPLSSQPSKKKSKTLDWQEQRKIERERK 74

Query: 74  QFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIG 133
           Q EED+QTLA+I+APIPQSNIGFKLLKQMGYTPG+ALGKEGSG  EPVGL+IRRSRAGIG
Sbjct: 75  QLEEDQQTLAKIDAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRVEPVGLDIRRSRAGIG 134

Query: 134 RQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLENK 193
           R+DP+KE +K+E I  ERK+ ++EALM EFGS QK QWRSRR+VVNY KAKAALDQLENK
Sbjct: 135 REDPLKEMRKREEIEFERKKKNEEALMAEFGSWQKSQWRSRRVVVNYKKAKAALDQLENK 194

Query: 194 EVXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCGYQYDSKELLLSNC 253
             XXXXXXXXXXXXXXXXXXXXXXXXXXL+ I++KLRDE++YC FCG+QY+S E LLS+C
Sbjct: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLQDIVMKLRDEYQYCPFCGFQYESMEALLSSC 254

Query: 254 PGINEDDH 262
           PG NEDDH
Sbjct: 255 PGTNEDDH 262

[Close]

BLAST of Carg03559 vs. TrEMBL
Match: tr|A0A0B0PCI4|A0A0B0PCI4_GOSAR (Coiled-coil domain-containing 75 OS=Gossypium arboreum OX=29729 GN=F383_05393 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.9e-77
Identity = 184/249 (73.90%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 14  DGEEDYMGDLSKLLPPEVTSSSKSMSKKLPANKTPAVQTSIKKPKTFNWQEQRRRDRERK 73
           +GEEDYMGDLS+ LPPE +++SK   KK+P +   + Q S KK KT +WQEQR+ +RERK
Sbjct: 15  EGEEDYMGDLSQFLPPEPSNTSKFSLKKIPNSNPLSSQPSKKKSKTLDWQEQRKIERERK 74

Query: 74  QFEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIG 133
           Q EED+QTLA+I+APIPQSNIGFKLLKQMGYTPG+ALGKEGSG  EPVGL+IRRSRAGIG
Sbjct: 75  QLEEDQQTLAKIDAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRVEPVGLDIRRSRAGIG 134

Query: 134 RQDPIKEKKKQEVIRSERKRNHQEALMEEFGSRQKLQWRSRRIVVNYHKAKAALDQLENK 193
           R+DP+KEK+K+E I  ERK+ ++EALM EFGS QK QWRSRR+VVNY KAKAALDQLENK
Sbjct: 135 REDPLKEKRKREKIEFERKKKNEEALMAEFGSWQKSQWRSRRVVVNYKKAKAALDQLENK 194

Query: 194 E-VXXXXXXXXXXXXXXXXXXXXXXXXXXLESILIKLRDEHRYCLFCGYQYDSKELLLSN 253
           E VXXXXXXXXXXXXXXXXXXXXXXXXXXL+ I++KLRDE++YC FCG QY+S E L S+
Sbjct: 195 EFVXXXXXXXXXXXXXXXXXXXXXXXXXXLQDIVMKLRDEYQYCPFCGIQYESMEALFSS 254

Query: 254 CPGINEDDH 262
           CPG NEDDH
Sbjct: 255 CPGTNEDDH 263

The following BLAST results are available for this feature:

BLAST of Carg03559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935377.1	2.9e-122	100.00	G patch domain-containing protein 11 [Cucurbita moschata]	[more]
XP_022983073.1	1.6e-120	98.85	G patch domain-containing protein 11 [Cucurbita maxima]	[more]
XP_023527963.1	2.1e-120	98.85	G patch domain-containing protein 11 [Cucurbita pepo subsp. pepo]	[more]
XP_022159391.1	2.3e-103	85.55	G patch domain-containing protein 11 [Momordica charantia]	[more]
XP_008443073.1	3.5e-91	80.84	PREDICTED: G patch domain-containing protein 11 [Cucumis melo]	[more]

BLAST of Carg03559 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57910.1	9.9e-64	63.45	D111/G-patch domain-containing protein	[more]
AT3G54230.2	3.2e-06	46.00	suppressor of abi3-5	[more]
AT5G08535.1	3.0e-04	40.00	D111/G-patch domain-containing protein	[more]

BLAST of Carg03559 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3UFS4\|GPT11_MOUSE	9.6e-16	41.36	G patch domain-containing protein 11 OS=Mus musculus OX=10090 GN=Gpatch11 PE=1 S...	[more]
sp\|Q8N954\|GPT11_HUMAN	2.1e-15	39.15	G patch domain-containing protein 11 OS=Homo sapiens OX=9606 GN=GPATCH11 PE=1 SV...	[more]
sp\|Q2KI19\|GPT11_BOVIN	2.8e-15	39.47	G patch domain-containing protein 11 OS=Bos taurus OX=9913 GN=GPATCH11 PE=2 SV=2	[more]
sp\|Q6DGZ0\|GPT11_DANRE	4.7e-15	27.51	G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=...	[more]
sp\|Q6DF57\|GPT11_XENTR	1.7e-12	31.00	G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 P...	[more]

BLAST of Carg03559 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B6R8\|A0A1S3B6R8_CUCME	2.3e-91	80.84	G patch domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103486779 PE=...	[more]
tr\|A0A2C9VDE1\|A0A2C9VDE1_MANES	1.4e-83	72.08	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G045100 PE=4 SV=...	[more]
tr\|A0A0A0LGZ2\|A0A0A0LGZ2_CUCSA	1.1e-80	75.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809920 PE=4 SV=1	[more]
tr\|A0A1U8HZQ2\|A0A1U8HZQ2_GOSHI	8.5e-78	73.39	G patch domain-containing protein 11-like isoform X1 OS=Gossypium hirsutum OX=36...	[more]
tr\|A0A0B0PCI4\|A0A0B0PCI4_GOSAR	1.9e-77	73.90	Coiled-coil domain-containing 75 OS=Gossypium arboreum OX=29729 GN=F383_05393 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR039249	GPATCH11
IPR000467	G_patch_dom
IPR025239	DUF4187

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03559-RA	Carg03559-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025239	Domain of unknown function DUF4187	SMART	SM01173	DUF4187_2	coord: 208..261 e-value: 1.8E-19 score: 80.7
IPR025239	Domain of unknown function DUF4187	PFAM	PF13821	DUF4187	coord: 208..261 e-value: 6.5E-20 score: 70.6
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 89..135 e-value: 2.4E-12 score: 57.0
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 91..133 e-value: 1.3E-13 score: 50.5
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 91..137 score: 14.271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..218
None	No IPR available	PANTHER	PTHR21032:SF0	G PATCH DOMAIN-CONTAINING PROTEIN 11	coord: 13..261
IPR039249	G patch domain-containing protein 11	PANTHER	PTHR21032	UNCHARACTERIZED	coord: 13..261

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03559	Cla017528	Watermelon (97103) v1	carwmB0237
Carg03559	Csa3G809920	Cucumber (Chinese Long) v2	carcuB0276
Carg03559	MELO3C009640	Melon (DHL92) v3.5.1	carmeB0251
Carg03559	ClCG10G017400	Watermelon (Charleston Gray)	carwcgB0240
Carg03559	CSPI03G36610	Wild cucumber (PI 183967)	carcpiB0280
Carg03559	Cucsa.242800	Cucumber (Gy14) v1	carcgyB0294
Carg03559	CmaCh14G004300	Cucurbita maxima (Rimu)	carcmaB0343
Carg03559	CmoCh14G004350	Cucurbita moschata (Rifu)	carcmoB0347
Carg03559	Lsi03G017230	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03559	Cp4.1LG03g03760	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03559	CsGy3G034080	Cucumber (Gy14) v2	carcgybB0263
Carg03559	MELO3C009640.2	Melon (DHL92) v3.6.1	carmedB0261
Carg03559	CsaV3_3G038970	Cucumber (Chinese Long) v3	carcucB0279
Carg03559	Cla97C10G200270	Watermelon (97103) v2	carwmbB0254
Carg03559	Bhi11G002206	Wax gourd	carwgoB0320

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03559	Silver-seed gourd	carcarB182
Carg03559	Silver-seed gourd	carcarB288
Carg03559	Cucurbita maxima (Rimu)	carcmaB0344
Carg03559	Cucurbita maxima (Rimu)	carcmaB0349
Carg03559	Cucurbita moschata (Rifu)	carcmoB0350
Carg03559	Cucurbita pepo (Zucchini)	carcpeB0355