Carg03036 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03036
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin-responsive protein
Location	Cucurbita_argyrosperma_scaffold_008 : 1486498 .. 1490241 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGATCTTTTGCTCTCGTAAAGATGGTGGGGTATATGGCTTAACCATTTTCTTAGTGCTTTTTGGGTGCTTTTTTTGCTGGGAATTTTAAGTTTAGGGTGGAAATCAAGTGTGATCTAATGTAGTTATCCCTTTTACCCGGACCCCCTATCCTTATCTGCCTTTTTTGCATTTGCTTTAACTAATGCACACCACCTGTTTGATATTTGTCCTCATCCAAATTTTCTCTCTGTTTTTGCTTCTTCTCATATATATGGCTTCTAAGATGATGGTTTGAAGCATCACAGCAATTGATTTGTCTTTCAAGCATCACAATGAGCAGGCGTCCTGAGCTTCTTGACTTGATTTCTGGGGACAGGGAATGGGAGTTGAATAGAATTGGTGTTGGGAGTTCTGTTAGTGAGAACAATAAACTTGAGCTTAGACTTGGATTGCCTGGAGAAGAGAGGCTTGCAGAAGGAAGTAGCTGCTTGAATTTTAGCCATGAAAGTGATGAATCCCATCTCTCTTCTGCTAAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTTTGTGATGAATTCCGACCCCACAAGCTGGTTTTTTCTGAGAAAACAGCTGAGAAGGTGGCTCCTCTCATTCATTGTCTTGGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCCCAGAAGCTATCTCAGCCATCACAGTCGTTATATTTAGAACATTTGTTGATGCCTCAGAGATTGGACTTGGTGTCAGAGGAGCCATCAAAGACATGCAGCTTGAAAACAGCTGAGTTTCCTTACTCAACTGGGAAATCATGTCTCAATAATGGGTCAGTTCCTGCAGAATCATCTGAACCTAAACACCATGACAAAAGGTTAGTCAGCTTATCTTCTCTTATATCCTGTTTTCTAGTCATTCATATTAAACTCTACTTTTTTAAGCGATGGATATCATGTCACTGATATGGTCTATCTCCCGACTATTATTACTTCGTTCTACGTGAGATCCCACGTTGGATAGAGAGGAGAACGAAACATTCCTTATAAAGGTGTGAAAATCTCTCCCTAGTAGACACTTTTAAAAACCGTGAGGCTGATGACAATGCATAACGGGTCAAAACAGACAATATCTGTTAACAGTAGGCTTGAGTTGTTACAAATAGTATCAGAGCCAGACACTAAACGGTGTGCCAATGAGGACGCTGGGTCCTGAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCCTTAAAAGGGTGTGGAAACCTCTCTCTAAAAGACATGTTTTAAAACTGTGAGGCTGACAGTAATACATAACGAGCCAGAGTGGACAATATCTACCCGTGGTGGACTTAGGCCGTTACATATTTGCTTTTACTTATAATTGGGCCTTTTTCTCATTCAGAGCTAGTTTTAATTTCAAAACGTCTATGTCTTGAAGTTTTTCAAGGAAACAAGTAATGCTAAGTTGCTAATTGCAAGGAATTCAACATCTTGTCAGCAGGGCTTCAGTTGCATCAGCCGTTGGTTGGCCTCCCATTCGTTCTTTCAGGAAGAACTTTGCTGGCCCCCGCTCTTCAAAGCCTAACTCTCTTGTGTTGTCAAAAGAGGCTCTGCAGGATGAGAATGGCTCAAAATTATCTCACTGTTCCAACGGACAAATGTTTGTAAAAGTTTGTATGGATGGAATTCCCATCGGAAGAAAACTGAATCTCCAAGCCTATAATGGTTATGATCAACTGTCTGCTGGCATAGACGAACTCTTCCACTGTCTTCTTGCAGGTAATCCTTCAATGCCCTGCATTCAATCGATATTTTGTCCTATACTGCATATTTCTTTTGTAAATGATAACTAGTAAGTCCATTTGATAATGATTTCGTTTTTAGTCTTTAGCTTTTGAAATTTACGCTTGTTTTCTCCCAATTTATTTACTATAGTTTTCGTTTACTGAGGAAACATTTGAACTCTTAGTCGAATTTCAAAAACGAAAACAAGTTTTTAAATAGTTTTCAAAACTTGGCTTCGTTTTTGTTTTTTGAAATATGGGATAGAAAGTGGATAATAGAGGTGAGATCTCACATCAGTTAGAGAGGAGAACGAAACATTATTTATAAGGGTGTGGAAACTTCACCCTAGCAGACGTATTTTAAAACTTTGAGGAGAAGCCCGAAAGGAAAAGCCCAAATAGGACAATATCTACTAACAGTGGGCTTAAGCCGTTACAAATGGTATCAGAGCTAGACATTGAGCGGTGTGCTAGTAGAGACGCTGGCTTTGAAGGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGACAACGAAACATTCTTTATAAGGGAGTGGAAACCTCTCCCAGGAAAGCCCAAAGAGGACAACAACTATTAGCGATGGGCTTGGGGTGTGACAATAAAACAAATGAACCTATACCTGAAAGTTGTGTTTATAAGCTTAGTTTTCAAACTAAGACTAAGTTTCAAATTAAGTTGTTATTGCTGAAATTACTGCTCACTTGTTTCTTATGTTCTTCCTCCTAATTAACTACAGTACAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGGTGGAGGAAACGACCTCGTTATCTGATTCCAAACACGAAAACGGGCTGTACACTCTAGTTTACTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAAGTAAGCATTTCCCACCACTGATCTTGTAGCCCATGTCACTATCATTTTCCTGACCAAATCCAATACAATCTTAGGAAAGGGGGTCTTTTTAGTATTACTTTCTTGTTTAGAATGATTGTGAGATCCCACGTCAGTTAGAGAGGGGAGCGAAACATTCCTTATAAGGGTGTGGAGCCCTCTCCCTAGTAGACACGTTTTAAAATCGTGAGGCTGACAGAGATACGTAATGGGTCAAAACAGACAATAACTGCTAGCTGTGGGTTTAGACGGTTACAATGCTTCCTTGCTTTCTGTTCTGTTTATGAAACAGGAACCTTTTTTAAGTCATAACTTTCGCTTTCTTTGTATGGTGGGCTTATGGGGCTTCATTTTCATGCAGCATGTTTGTTTCCACTGTGAAGAGGCTACGTGTGTTAAGGAATGCTGTTGTTGCCACTGAAATGAAGTGAAACTCCTTTCAAAATTCTGAAAGGTACTGGAAATGTTCTTGTCAAATCTTTCCAAGTCTTGGCTCAGAATAGCAGCAATTTTGAGCAGCAATGGCGACAGTTTATGCCAAAGAGTGATACCAAGTTAGGATTTTCCCATATAAGTTTTCATTTTACTAGCTGCAACCTGTAAGCGCAGCCTTGGGTTTCAAGGTTGAGGCAACTGCTACCGTGTGTGTACATATTTATGTTCTGTATATTCTGAAATACGAGTTCTGGTTGTGAATTCTTCTTGGGAATTTACTGCATCCCTCTAAGTTCTGATTAAAACAACAGAAACAAGAGAAGAATGATTGGAAGACGCAGTTTTAATGTGGTGGACTCACAACGATTGTGTGATACTTGTTCTAACACAGTGAACAAATCAGTTATGTGAAGTTCGGACTTCATGGATAATATCGGCGTGTGTTCGAGTCTCAAGTCATGTTTTGAGAGAAGCATTTTGGAAAACGTGTGTGAGAAAATACGTTTAAAATAATTGTAAAGAAAACAATGTTATAAGCTAAAAGCGAGTAGGCGACAACGATTTTGATAGCATAT

mRNA sequence

TTGGGATCTTTTGCTCTCGTAAAGATGGTGGGATGATGGTTTGAAGCATCACAGCAATTGATTTGTCTTTCAAGCATCACAATGAGCAGGCGTCCTGAGCTTCTTGACTTGATTTCTGGGGACAGGGAATGGGAGTTGAATAGAATTGGTGTTGGGAGTTCTGTTAGTGAGAACAATAAACTTGAGCTTAGACTTGGATTGCCTGGAGAAGAGAGGCTTGCAGAAGGAAGTAGCTGCTTGAATTTTAGCCATGAAAGTGATGAATCCCATCTCTCTTCTGCTAAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTTTGTGATGAATTCCGACCCCACAAGCTGGTTTTTTCTGAGAAAACAGCTGAGAAGGTGGCTCCTCTCATTCATTGTCTTGGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCCCAGAAGCTATCTCAGCCATCACAGTCGTTATATTTAGAACATTTGTTGATGCCTCAGAGATTGGACTTGGTGTCAGAGGAGCCATCAAAGACATGCAGCTTGAAAACAGCTGAGTTTCCTTACTCAACTGGGAAATCATGTCTCAATAATGGGTCAGTTCCTGCAGAATCATCTGAACCTAAACACCATGACAAAAGGGCTTCAGTTGCATCAGCCGTTGGTTGGCCTCCCATTCGTTCTTTCAGGAAGAACTTTGCTGGCCCCCGCTCTTCAAAGCCTAACTCTCTTGTGTTGTCAAAAGAGGCTCTGCAGGATGAGAATGGCTCAAAATTATCTCACTGTTCCAACGGACAAATGTTTGTAAAAGTTTGTATGGATGGAATTCCCATCGGAAGAAAACTGAATCTCCAAGCCTATAATGGTTATGATCAACTGTCTGCTGGCATAGACGAACTCTTCCACTGTCTTCTTGCAGTACAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGGTGGAGGAAACGACCTCGTTATCTGATTCCAAACACGAAAACGGGCTGTACACTCTAGTTTACTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAACATGTTTGTTTCCACTGTGAAGAGGCTACGTGTGTTAAGGAATGCTGTTGTTGCCACTGAAATGAAGTGAAACTCCTTTCAAAATTCTGAAAGGTACTGGAAATGTTCTTGTCAAATCTTTCCAAGTCTTGGCTCAGAATAGCAGCAATTTTGAGCAGCAATGGCGACAGTTTATGCCAAAGAGTGATACCAAGTTAGGATTTTCCCATATAAGTTTTCATTTTACTAGCTGCAACCTGTAAGCGCAGCCTTGGGTTTCAAGGTTGAGGCAACTGCTACCGTGTGTGTACATATTTATGTTCTGTATATTCTGAAATACGAGTTCTGGTTGTGAATTCTTCTTGGGAATTTACTGCATCCCTCTAAGTTCTGATTAAAACAACAGAAACAAGAGAAGAATGATTGGAAGACGCAGTTTTAATGTGGTGGACTCACAACGATTGTGTGATACTTGTTCTAACACAGTGAACAAATCAGTTATGTGAAGTTCGGACTTCATGGATAATATCGGCGTGTGTTCGAGTCTCAAGTCATGTTTTGAGAGAAGCATTTTGGAAAACGTGTGTGAGAAAATACGTTTAAAATAATTGTAAAGAAAACAATGTTATAAGCTAAAAGCGAGTAGGCGACAACGATTTTGATAGCATAT

Coding sequence (CDS)

ATGAGCAGGCGTCCTGAGCTTCTTGACTTGATTTCTGGGGACAGGGAATGGGAGTTGAATAGAATTGGTGTTGGGAGTTCTGTTAGTGAGAACAATAAACTTGAGCTTAGACTTGGATTGCCTGGAGAAGAGAGGCTTGCAGAAGGAAGTAGCTGCTTGAATTTTAGCCATGAAAGTGATGAATCCCATCTCTCTTCTGCTAAGCTCTTTCCTTCTTGTTTGAACATTAGAAGCAACAAAAGGGCGCTTTGTGATGAATTCCGACCCCACAAGCTGGTTTTTTCTGAGAAAACAGCTGAGAAGGTGGCTCCTCTCATTCATTGTCTTGGTGCTTCCTTACCATCTTCAGCTTTTCAGAGGGAAGCCCAGAAGCTATCTCAGCCATCACAGTCGTTATATTTAGAACATTTGTTGATGCCTCAGAGATTGGACTTGGTGTCAGAGGAGCCATCAAAGACATGCAGCTTGAAAACAGCTGAGTTTCCTTACTCAACTGGGAAATCATGTCTCAATAATGGGTCAGTTCCTGCAGAATCATCTGAACCTAAACACCATGACAAAAGGGCTTCAGTTGCATCAGCCGTTGGTTGGCCTCCCATTCGTTCTTTCAGGAAGAACTTTGCTGGCCCCCGCTCTTCAAAGCCTAACTCTCTTGTGTTGTCAAAAGAGGCTCTGCAGGATGAGAATGGCTCAAAATTATCTCACTGTTCCAACGGACAAATGTTTGTAAAAGTTTGTATGGATGGAATTCCCATCGGAAGAAAACTGAATCTCCAAGCCTATAATGGTTATGATCAACTGTCTGCTGGCATAGACGAACTCTTCCACTGTCTTCTTGCAGTACAGAGAAACTATCTAGCAGCTGAAGATGGGAGAAAGGTGGAGGAAACGACCTCGTTATCTGATTCCAAACACGAAAACGGGCTGTACACTCTAGTTTACTATGATAATGAAGGGGACAGGATGCTTGTTGGTGATGTCCCATGGAACATGTTTGTTTCCACTGTGAAGAGGCTACGTGTGTTAAGGAATGCTGTTGTTGCCACTGAAATGAAGTGA

Protein sequence

MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESDESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK

Homology

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BLAST of Carg03036 vs. NCBI nr
Match: XP_022936580.1 (auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 701.0 bits (1808), Expect = 2.0e-198
Identity = 349/352 (99.15%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGE+RLAEGS+CLNFSHESD
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEDRLAEGSNCLNFSHESD 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120
           ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120

Query: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180
           EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS
Sbjct: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180

Query: 181 EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQ 240
           EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQ
Sbjct: 181 EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQ 240

Query: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSL 300
           MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLA QRNYLAAEDGRKVEETTSL
Sbjct: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRNYLAAEDGRKVEETTSL 300

Query: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353
           SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK
Sbjct: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 352

[Close]

BLAST of Carg03036 vs. NCBI nr
Match: XP_022936579.1 (auxin-responsive protein IAA18-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 696.4 bits (1796), Expect = 4.9e-197
Identity = 349/353 (98.87%), Postives = 351/353 (99.43%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGE+RLAEGS+CLNFSHESD
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEDRLAEGSNCLNFSHESD 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120
           ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR
Sbjct: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120

Query: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180
           EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS
Sbjct: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180

Query: 181 EPKHHDK-RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNG 240
           EPKHHDK RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNG
Sbjct: 181 EPKHHDKSRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNG 240

Query: 241 QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTS 300
           QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLA QRNYLAAEDGRKVEETTS
Sbjct: 241 QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRNYLAAEDGRKVEETTS 300

Query: 301 LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353
           LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK
Sbjct: 301 LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353

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BLAST of Carg03036 vs. NCBI nr
Match: XP_023535170.1 (auxin-responsive protein IAA16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681.4 bits (1757), Expect = 1.6e-192
Identity = 340/352 (96.59%), Postives = 345/352 (98.01%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           MSRRPELLDLISGDREWELNRIGVGS VSENNKLELRLGLPGEERLAEGSSCLNFSHESD
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSFVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120
           ES LSSAKLFPSCLN+R NKRALCDEF+PHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR
Sbjct: 61  ESLLSSAKLFPSCLNVRGNKRALCDEFQPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120

Query: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180
           EAQKL QPSQSLYLEHLLMPQRLDLVSEEPSK+CSLKTAEFPY T KSCLNNGSVPAESS
Sbjct: 121 EAQKLPQPSQSLYLEHLLMPQRLDLVSEEPSKSCSLKTAEFPYLTEKSCLNNGSVPAESS 180

Query: 181 EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQ 240
           EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA+QDENGSKLSHCSNGQ
Sbjct: 181 EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEAVQDENGSKLSHCSNGQ 240

Query: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSL 300
           MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLA QRNYLAAEDGRKVEETTSL
Sbjct: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRNYLAAEDGRKVEETTSL 300

Query: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353
           SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLR+AVVATEMK
Sbjct: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRSAVVATEMK 352

[Close]

BLAST of Carg03036 vs. NCBI nr
Match: XP_022975672.1 (auxin-responsive protein IAA18-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 680.2 bits (1754), Expect = 3.6e-192
Identity = 340/352 (96.59%), Postives = 345/352 (98.01%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERL EGSSCLNFSHESD
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLTEGSSCLNFSHESD 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120
           ESHL SAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIH LGASLPSSAFQR
Sbjct: 61  ESHLLSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHYLGASLPSSAFQR 120

Query: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180
           EAQKLSQPSQSLYLEHLLMPQ+LDLVSEEPSKTCSLKTAEFPYST KSCLNNGSVPAESS
Sbjct: 121 EAQKLSQPSQSLYLEHLLMPQKLDLVSEEPSKTCSLKTAEFPYSTEKSCLNNGSVPAESS 180

Query: 181 EPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQ 240
           EPKH DKRASVASAVGWPPIRSFRKNF+GPRSSKPNSLVLSKEA+QDENGSKLSHCSNGQ
Sbjct: 181 EPKHQDKRASVASAVGWPPIRSFRKNFSGPRSSKPNSLVLSKEAVQDENGSKLSHCSNGQ 240

Query: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSL 300
           MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLA QRNY AAEDGRK+EETTSL
Sbjct: 241 MFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRNYQAAEDGRKLEETTSL 300

Query: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353
           SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLR+AVVATEMK
Sbjct: 301 SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRSAVVATEMK 352

[Close]

BLAST of Carg03036 vs. NCBI nr
Match: XP_022975668.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 675.6 bits (1742), Expect = 8.9e-191
Identity = 340/353 (96.32%), Postives = 345/353 (97.73%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERL EGSSCLNFSHESD
Sbjct: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLTEGSSCLNFSHESD 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQR 120
           ESHL SAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIH LGASLPSSAFQR
Sbjct: 61  ESHLLSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHYLGASLPSSAFQR 120

Query: 121 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPAESS 180
           EAQKLSQPSQSLYLEHLLMPQ+LDLVSEEPSKTCSLKTAEFPYST KSCLNNGSVPAESS
Sbjct: 121 EAQKLSQPSQSLYLEHLLMPQKLDLVSEEPSKTCSLKTAEFPYSTEKSCLNNGSVPAESS 180

Query: 181 EPKHHDK-RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNG 240
           EPKH DK RASVASAVGWPPIRSFRKNF+GPRSSKPNSLVLSKEA+QDENGSKLSHCSNG
Sbjct: 181 EPKHQDKSRASVASAVGWPPIRSFRKNFSGPRSSKPNSLVLSKEAVQDENGSKLSHCSNG 240

Query: 241 QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTS 300
           QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLA QRNY AAEDGRK+EETTS
Sbjct: 241 QMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAAQRNYQAAEDGRKLEETTS 300

Query: 301 LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEMK 353
           LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLR+AVVATEMK
Sbjct: 301 LSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRSAVVATEMK 353

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BLAST of Carg03036 vs. TAIR10
Match: AT3G16500.1 (phytochrome-associated protein 1)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-36
Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 179 SSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSK-PNSLVLSKEALQDENGSKLSHCS 238
           +S P    KR +    VGWPP+RSFRKN A   SSK  N      +  + ++G K     
Sbjct: 89  TSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETK 148

Query: 239 NGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEE- 298
              MFVK+ MDG+PIGRK++L AYN Y+QLS  +D+LF  LLA QR+     DG+  E+ 
Sbjct: 149 KEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQGEEKP 208

Query: 299 TTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEM 352
              L D K   G +TL Y DNEGD+MLVGDVPW MFVS+VKRLRV++++ +++ +
Sbjct: 209 IIGLLDGK---GEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257

[Close]

BLAST of Carg03036 vs. TAIR10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34
Identity = 83/185 (44.86%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 173 GSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSK------PNSLVLSKEALQ 232
           G   + SS      KR +    VGWPP+RSFRKN A   SSK       ++ V  K    
Sbjct: 76  GKYFSPSSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKC 135

Query: 233 DENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYL 292
           D           G MFVK+ M G+PIGRK++L A+N Y+QLS  +D+LF  LLA QR++ 
Sbjct: 136 DAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFP 195

Query: 293 AAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAV 352
           ++ +  K    T L D    NG YTL Y DNEGD+MLVGDVPW MFVS+VKRLRV++ + 
Sbjct: 196 SSIEDEK--PITGLLDG---NGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 255

[Close]

BLAST of Carg03036 vs. TAIR10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 72/176 (40.91%), Postives = 92/176 (52.27%), Query Frame = 0


Query: 172 NGSVPAESSEPKH--HDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDEN 231
           NGS    S++      + R  VA  VGWPP+RS R+N                  L++E 
Sbjct: 25  NGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTA--------------QLKEEM 84

Query: 232 GSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAE 291
             K S     +++VK+ M+G+PIGRK+NL AYN Y QLS  +D+LF              
Sbjct: 85  KKKESD-EEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-------------- 144

Query: 292 DGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNA 346
                    S  DS   N  YTLVY D EGD++LVGDVPW MFVSTVKRL VL+ +
Sbjct: 145 ---------SKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTS 162

[Close]

BLAST of Carg03036 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 64/174 (36.78%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 174 SVPAESSEPKH--HDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGS 233
           S+  E S  K   ++  A+ A  VGWPPIRS+RKN     +SK    V  K  L      
Sbjct: 161 SIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL------ 220

Query: 234 KLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDG 293
                  G +FVKV MDG P  RK++L+ Y  Y QLS+ ++++F C    Q     A+ G
Sbjct: 221 -------GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQ-G 280

Query: 294 RKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNA 346
           R+      L D  H    + L Y D +GD MLVGDVPW +F  T ++L++++ +
Sbjct: 281 RERMSEIKLKDLLH-GSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGS 319

[Close]

BLAST of Carg03036 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 189 ASVASAVGWPPIRSFRKN-FAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQMFVKVCM 248
           AS A  VGWPPIRSFRKN  A  +S KP +   ++EA  +        C    ++VKV M
Sbjct: 139 ASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEA--EAKSGPEQPC----LYVKVSM 198

Query: 249 DGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQ--RNYLAAEDGRKVEETTSLSDSKH 308
           +G P  RK++L+ Y  Y +LS+ ++++F C    Q   +     DG      T L     
Sbjct: 199 EGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSE 258

Query: 309 ENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNA 346
               Y + Y D + D MLVGDVPW MF+ + K+LR+++++
Sbjct: 259 ----YVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSS 288

[Close]

BLAST of Carg03036 vs. Swiss-Prot
Match: sp|Q8LAL2|IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-34
Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 179 SSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSK-PNSLVLSKEALQDENGSKLSHCS 238
           +S P    KR +    VGWPP+RSFRKN A   SSK  N      +  + ++G K     
Sbjct: 89  TSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETK 148

Query: 239 NGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEE- 298
              MFVK+ MDG+PIGRK++L AYN Y+QLS  +D+LF  LLA QR+     DG+  E+ 
Sbjct: 149 KEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD---ISDGQGEEKP 208

Query: 299 TTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEM 352
              L D K   G +TL Y DNEGD+MLVGDVPW MFVS+VKRLRV++++ +++ +
Sbjct: 209 IIGLLDGK---GEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257

[Close]

BLAST of Carg03036 vs. Swiss-Prot
Match: sp|Q5W670|IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.7e-34
Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 0


Query: 147 SEEPSKTCSLKTAEFPYSTGKSCLNNG--SVPAESSEPKHHDKRASVASAVGWPPIRSFR 206
           +EE  K  +L          K C  +   S  A SS P+    R ++   VGWPPIRSFR
Sbjct: 122 TEECGKELTLGDENMAGERKKGCCPSPPCSAAAHSSNPQ---GRGAIPPVVGWPPIRSFR 181

Query: 207 KNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGY 266
           +N     S K      S E   DE   K       +  VK+ MDGIPIGRK++LQ Y+ Y
Sbjct: 182 RNLTNGSSFKQ-----SPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSY 241

Query: 267 DQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLV 326
            +LS+ ++ELF   L  Q++   AE G +  E    S      G+YTLVY DN+GDRML 
Sbjct: 242 QKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLA 301

Query: 327 GDVPWNMFVSTVKRLRVLRNAVVATEM 352
           GD+PW +FVSTVKRLRV+R + +  +M
Sbjct: 302 GDIPWKVFVSTVKRLRVMRRSELPHDM 320

[Close]

BLAST of Carg03036 vs. Swiss-Prot
Match: sp|O24408|IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-33
Identity = 83/185 (44.86%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 173 GSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSK------PNSLVLSKEALQ 232
           G   + SS      KR +    VGWPP+RSFRKN A   SSK       ++ V  K    
Sbjct: 76  GKYFSPSSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKC 135

Query: 233 DENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYL 292
           D           G MFVK+ M G+PIGRK++L A+N Y+QLS  +D+LF  LLA QR++ 
Sbjct: 136 DAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFP 195

Query: 293 AAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAV 352
           ++ +  K    T L D    NG YTL Y DNEGD+MLVGDVPW MFVS+VKRLRV++ + 
Sbjct: 196 SSIEDEK--PITGLLDG---NGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 255

[Close]

BLAST of Carg03036 vs. Swiss-Prot
Match: sp|Q6H543|IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-31
Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 188 RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQM--FVKV 247
           R+     VGWPP+R+FR+N A            SK +L+ +NG K +     +   F+K+
Sbjct: 133 RSPSTPVVGWPPVRTFRRNLA----------TSSKASLELQNGKKAAKAEEIKRAPFIKI 192

Query: 248 CMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSLSDSKH 307
            MDG+PIGRK++L A++ Y++LS  +D+LF  LLA QR+ L A      +E  ++S    
Sbjct: 193 NMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLD 252

Query: 308 ENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVATEM 352
             G YTLVY D EGD++LVGDVPW MFVS+VKRLRVL+ + +++ +
Sbjct: 253 GTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSSSL 288

[Close]

BLAST of Carg03036 vs. Swiss-Prot
Match: sp|Q8LQ74|IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29
Identity = 108/349 (30.95%), Postives = 154/349 (44.13%), Query Frame = 0


Query: 5   PELLDLISGDREWELNR-IGVGSSVS------ENNKLELRLGLPGEERLAEGSSCLNFSH 64
           P+LLDLI  ++EW+L   +G+G S +      E+ KL+L+LGLPG     E  +  ++  
Sbjct: 13  PQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDEAETLRDYRL 72

Query: 65  ESDESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSA 124
           + +   L S   FP      S            K  F +   +K             +  
Sbjct: 73  QQESPSL-SLSFFPK----HSKTXXXXXXXXGAKRGFIDTVEDK-------------TEG 132

Query: 125 FQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNGSVPA 184
           +  + Q+                 R     E   +                       PA
Sbjct: 133 YNDQKQQ----------------ARAGCGKELAVEEXXXXXXXXXXXXXXXXXXXXGAPA 192

Query: 185 ESSEPKHHDK-RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHC 244
             +  +   + R + A  VGWPPIRSFR+N A   SS                   L+ C
Sbjct: 193 TPARNRPQTQGRGAAAPVVGWPPIRSFRRNLA---SSXXXXXXXXXXXXXXXXXXXLT-C 252

Query: 245 SNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEE 304
               + VK+ MDGIPIGRK++L AYN YD LS+ + +LFH  L  Q++   A+  ++  +
Sbjct: 253 KKNPL-VKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGAD 312

Query: 305 TTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNA 346
                     +G YTLVY D+EGDRMLVGDVPW +FVST KRLRVLR++
Sbjct: 313 DKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSS 322

[Close]

BLAST of Carg03036 vs. TrEMBL
Match: tr|A0A1S3CRT9|A0A1S3CRT9_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 2.0e-151
Identity = 287/368 (77.99%), Postives = 305/368 (82.88%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           M R PELLDLIS DREW+L R GVGSSV ENNKLELRLGLPGEE LAE SSCLN +HE+ 
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPGEEGLAEASSCLNSNHENG 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120
           E  LSSA+ F SCLNIRSNKRAL                 DEF+PHKL+F EKTAEKV+P
Sbjct: 61  EISLSSARPFSSCLNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFYEKTAEKVSP 120

Query: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180
              CL ASLPSSAFQREAQKLSQPSQS YL+HLLMPQ LDLVSEEPSK    K  E    
Sbjct: 121 FTPCLSASLPSSAFQREAQKLSQPSQSSYLKHLLMPQNLDLVSEEPSKP---KATEL--- 180

Query: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240
              SCLN+ SVPAESSE KHHDKRASVA+AVGWPPI SFRKNFA PRSSKPNSL LSKE 
Sbjct: 181 --NSCLNSNSVPAESSETKHHDKRASVAAAVGWPPIPSFRKNFAVPRSSKPNSLELSKET 240

Query: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRN 300
           LQDENGS+LS CSNGQMFVKVCMDG+PIGRKLNLQAYN YDQLSAGIDELFH LLA QRN
Sbjct: 241 LQDENGSRLSDCSNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 353
           YLAAEDGRK+EETTS+SDSKH+NGLYTLVYYDNEGDRMLVGDVPW MFVSTVKRLRVL++
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 360

[Close]

BLAST of Carg03036 vs. TrEMBL
Match: tr|A0A0A0LHU0|A0A0A0LHU0_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.1e-149
Identity = 283/368 (76.90%), Postives = 302/368 (82.07%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           M R PELLDLIS DREW+L R GVGSSV ENNKLELRLGLPG     E SSCLN +HE+ 
Sbjct: 1   MVRCPELLDLISRDREWDLTRNGVGSSVIENNKLELRLGLPG-----EASSCLNGNHENG 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALC----------------DEFRPHKLVFSEKTAEKVAP 120
           E  LSSAK F SC NIRSNKRAL                 DEF+PHKL+F EKTAEKV+P
Sbjct: 61  EISLSSAKPFSSCFNIRSNKRALYAKTEGIAGDGNRLDRNDEFQPHKLIFHEKTAEKVSP 120

Query: 121 LIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYS 180
              CL ASLPSSAF REAQKLSQPSQS YL+H+LMPQ LDLVSEE SK CSLK  E    
Sbjct: 121 FTPCLSASLPSSAFHREAQKLSQPSQSSYLKHVLMPQNLDLVSEESSKPCSLKATEL--- 180

Query: 181 TGKSCLNNGSVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEA 240
              SCLN+GSVPAESSE KHHDKRASV++AVGWPPIRSFRKNFA PRSSKPNSL  SKE 
Sbjct: 181 --NSCLNDGSVPAESSETKHHDKRASVSAAVGWPPIRSFRKNFAVPRSSKPNSLESSKET 240

Query: 241 LQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRN 300
           +QDENGSKLS C NGQMFVKVCMDG+PIGRKLNLQAYN YDQLSAGIDELFH LLA QRN
Sbjct: 241 VQDENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELFHSLLAAQRN 300

Query: 301 YLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRN 353
           YLAAEDGRK+EETTS+SDSKH+NGLYTLVYYDNEGDRMLVGDVPW MFVSTVKRLRVL++
Sbjct: 301 YLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVSTVKRLRVLKS 358

[Close]

BLAST of Carg03036 vs. TrEMBL
Match: tr|A0A2P4I0B1|A0A2P4I0B1_QUESU (Auxin-responsive protein OS=Quercus suber OX=58331 GN=CFP56_41784 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57
Identity = 142/329 (43.16%), Postives = 205/329 (62.31%), Query Frame = 0


Query: 26  SSVSENNKLELRLGLPGEERLAEGSSCLNFSHESDESHLSSAKLFPSCLNIRS--NKRAL 85
           + VSE  KLELRLG PGE   A+    + F+++ + +     +   +    R   +K A 
Sbjct: 15  NGVSEEKKLELRLGPPGE---AQSIHYVGFNNKINGAKRGRQETVVAKKEERKWLSKNAQ 74

Query: 86  CDEFRPHKLVFSEKTAEKVAPLIHCLGASLPSSAFQREAQKLSQPSQSLYLEHLLMPQRL 145
            D+++   L F+EKT E+V P      ASL SSAF  + QK +Q  +  Y+++  + +RL
Sbjct: 75  -DQYQ--DLSFTEKTVERVFP-TSWSSASLHSSAFHMDTQKQNQQPKPTYIQYPSISRRL 134

Query: 146 DLVSEEPSKTCSLKTAEFPYSTGKSCLN---NGSVPAESSEPKHHDKRASVASAVGWPPI 205
            +++EE  +TC  + AE   S  K+C +   + SV   ++EP +  KR +VA  VGWPPI
Sbjct: 135 SVMAEESQQTCGCRVAEMQNSDKKACSSRPASASVSTATAEPINSQKRIAVAPVVGWPPI 194

Query: 206 RSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSHCSNGQMFVKVCMDGIPIGRKLNLQA 265
           RSFRKN      SKP     +    +  +G KL +  +  MFVK+ MDG+PIGRK++L+A
Sbjct: 195 RSFRKNLGSRTFSKPAPKSPNATPKEGSDGEKLVNLEH-HMFVKINMDGVPIGRKVDLKA 254

Query: 266 YNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVEETTSLSDSKHENGLYTLVYYDNEGD 325
           Y+ Y++LS  IDELF  LLA QR+Y AA+   KV +  +++DS H +  YTL+Y DNEGD
Sbjct: 255 YDSYEKLSFAIDELFGDLLAAQRDYSAAKKENKVGDAKAITDSLHGSREYTLIYEDNEGD 314

Query: 326 RMLVGDVPWNMFVSTVKRLRVLRNAVVAT 350
           RMLVGDVPW+MFVSTVKRLRVL+++ ++T
Sbjct: 315 RMLVGDVPWHMFVSTVKRLRVLKSSEIST 335

[Close]

BLAST of Carg03036 vs. TrEMBL
Match: tr|A0A200QDQ8|A0A200QDQ8_9MAGN (Auxin-responsive protein OS=Macleaya cordata OX=56857 GN=BVC80_209g276 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.0e-54
Identity = 142/350 (40.57%), Postives = 201/350 (57.43%), Query Frame = 0


Query: 5   PELLDLISGDREWELNRIGVG-SSVSENNKLELRLGLPGEERLAEGSSCLNFSHESDESH 64
           P+L+DLI  DR+W     G     V+E  KLEL+LG PGEE          F +E++++H
Sbjct: 12  PQLIDLIHNDRKWVGRENGGNFGRVAEEKKLELKLGPPGEEAW--------FINENNKNH 71

Query: 65  LSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTAEKVAPLIH---CLGASLPSSAFQR 124
            SSAK    C +   ++  L  + + HK  FS    + V  +     C G+S   S F  
Sbjct: 72  NSSAKPSFGCFSSMVSE-TLNSKNQNHK--FSSMETQPVGTIFSSSWCPGSSPSPSNFHM 131

Query: 125 EAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTA---EFPYSTGKSCL-NNGSVP 184
           + Q+  Q  +  YL+   +PQ L  V++E S+ C+ K     +  ++  K+C   + SVP
Sbjct: 132 KTQQQFQQLKPSYLQFQSVPQNLPAVAKESSQLCNTKVVVELQKNHTEKKACFPTSASVP 191

Query: 185 AESSEPKHHDK-RASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKLSH 244
           A ++      K R + A  VGWPPIRSFRKN +   +SKP S        +D +  KL +
Sbjct: 192 ANTASCNSSQKSRTAPAPVVGWPPIRSFRKNLSNISTSKPASESEYGVLSKDPSIKKLEN 251

Query: 245 CSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRKVE 304
           C  G +FVK+ MDG+PIGRK++L AY+ Y++LS+ +DELF  LLA QR+   A    K+ 
Sbjct: 252 CKKG-LFVKINMDGVPIGRKVDLSAYDSYEKLSSAVDELFRSLLAAQRDSFTAGIHNKIA 311

Query: 305 ETTSLSDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNA 346
           E  +++      G YTLVY DNEGDRMLVGDVPW+MF STVKRLRVL+++
Sbjct: 312 EVEAITGLLDGTGEYTLVYEDNEGDRMLVGDVPWDMFASTVKRLRVLKSS 349

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BLAST of Carg03036 vs. TrEMBL
Match: tr|A0A061GRP7|A0A061GRP7_THECC (Auxin-responsive protein OS=Theobroma cacao OX=3641 GN=TCM_037224 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-52
Identity = 140/357 (39.22%), Postives = 206/357 (57.70%), Query Frame = 0


Query: 1   MSRRPELLDLISGDREWELNRIGVGSSVSENNKLELRLGLPGEERLAEGSSCLNFSHESD 60
           M   P LL+L   ++EW +N       VSE+ KLELRLG PGE      SS    +H + 
Sbjct: 1   MEEYPGLLNLNPMNKEWPVNH-----KVSEDRKLELRLGPPGEFLGCNNSS----THGTK 60

Query: 61  ESHLSSAKLFPSCLNIRSNKRALCDEFRPHKLVFSEKTA--EKVAPLIHCL-----GASL 120
            +   +A+           + A  D +R       +K +   K    ++C        S+
Sbjct: 61  RAFQHTAE----------TRIAEKDRWRDGSENQCQKLSCFAKTGDAVNCTPSPWSSGSI 120

Query: 121 PSSAFQREAQKLSQPSQSLYLEHLLMPQRLDLVSEEPSKTCSLKTAEFPYSTGKSCLNNG 180
           P SAFQR++Q  SQ S++ + ++L +P+ L  ++E+ S+ CS + AE  +   K+C +  
Sbjct: 121 PYSAFQRDSQMESQHSKASFFQNLPIPKNLAGMAEDFSQPCSSRGAEVQFPHRKACSSLA 180

Query: 181 SVPAESSEPKHHDKRASVASAVGWPPIRSFRKNFAGPRSSKPNSLVLSKEALQDENGSKL 240
           +  A+++     +KR + +  VGWPPIRSFRKN A   SSKP     S+   + + G K 
Sbjct: 181 TADADTATNNTSNKRIAYSPVVGWPPIRSFRKNLASSSSSKP----ASESPNEKDTGGKP 240

Query: 241 SHCSNGQMFVKVCMDGIPIGRKLNLQAYNGYDQLSAGIDELFHCLLAVQRNYLAAEDGRK 300
            +  N Q+FVK+ M+GIPIGRK+NL AYN Y++LS  IDELF  LLA QR+  A ++  K
Sbjct: 241 ENSKN-QLFVKINMEGIPIGRKVNLSAYNSYEELSLAIDELFSGLLAAQRDSSATQNENK 300

Query: 301 VEETTSL-SDSKHENGLYTLVYYDNEGDRMLVGDVPWNMFVSTVKRLRVLRNAVVAT 350
           +EE     + +   +G YTL+Y D+EGDRMLVGDVPW+MFVST KRL VL+++ ++T
Sbjct: 301 IEEFAKADAGTLAGSGEYTLIYEDDEGDRMLVGDVPWHMFVSTAKRLHVLKSSELST 333

The following BLAST results are available for this feature:

BLAST of Carg03036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936580.1	2.0e-198	99.15	auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata]	[more]
XP_022936579.1	4.9e-197	98.87	auxin-responsive protein IAA18-like isoform X1 [Cucurbita moschata]	[more]
XP_023535170.1	1.6e-192	96.59	auxin-responsive protein IAA16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975672.1	3.6e-192	96.59	auxin-responsive protein IAA18-like isoform X2 [Cucurbita maxima]	[more]
XP_022975668.1	8.9e-191	96.32	auxin-responsive protein IAA16-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg03036 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16500.1	6.9e-36	47.43	phytochrome-associated protein 1	[more]
AT1G51950.1	2.2e-34	44.86	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	1.7e-26	40.91	indole-3-acetic acid inducible 28	[more]
AT2G22670.4	2.3e-23	36.78	indoleacetic acid-induced protein 8	[more]
AT4G29080.1	1.3e-21	36.88	phytochrome-associated protein 2	[more]

BLAST of Carg03036 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LAL2\|IAA26_ARATH	1.2e-34	47.43	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
sp\|Q5W670\|IAA18_ORYSJ	4.7e-34	41.55	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]
sp\|O24408\|IAA18_ARATH	4.0e-33	44.86	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
sp\|Q6H543\|IAA7_ORYSJ	3.7e-31	43.37	Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 P...	[more]
sp\|Q8LQ74\|IAA6_ORYSJ	1.6e-29	30.95	Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 P...	[more]

BLAST of Carg03036 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRT9\|A0A1S3CRT9_CUCME	2.0e-151	77.99	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103503610 PE=3 SV=1	[more]
tr\|A0A0A0LHU0\|A0A0A0LHU0_CUCSA	1.1e-149	76.90	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G895090 PE=3 SV=1	[more]
tr\|A0A2P4I0B1\|A0A2P4I0B1_QUESU	1.0e-57	43.16	Auxin-responsive protein OS=Quercus suber OX=58331 GN=CFP56_41784 PE=3 SV=1	[more]
tr\|A0A200QDQ8\|A0A200QDQ8_9MAGN	4.0e-54	40.57	Auxin-responsive protein OS=Macleaya cordata OX=56857 GN=BVC80_209g276 PE=3 SV=1	[more]
tr\|A0A061GRP7\|A0A061GRP7_THECC	1.7e-52	39.22	Auxin-responsive protein OS=Theobroma cacao OX=3641 GN=TCM_037224 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03036-RA	Carg03036-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 234..351 e-value: 1.8E-33 score: 116.5
None	No IPR available	PANTHER	PTHR31734:SF2	AUXIN-RESPONSIVE PROTEIN IAA18-RELATED	coord: 4..345
None	No IPR available	SUPERFAMILY	SSF54277	CAD & PB1 domains	coord: 233..341
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 34..344 e-value: 4.7E-56 score: 190.3
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 4..345
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 240..349 score: 21.818

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03036	Cla023102	Watermelon (97103) v1	carwmB0634
Carg03036	Csa3G895090	Cucumber (Chinese Long) v2	carcuB0655
Carg03036	MELO3C003473	Melon (DHL92) v3.5.1	carmeB0631
Carg03036	ClCG11G015060	Watermelon (Charleston Gray)	carwcgB0610
Carg03036	CSPI03G46010	Wild cucumber (PI 183967)	carcpiB0665
Carg03036	Cucsa.312460	Cucumber (Gy14) v1	carcgyB0712
Carg03036	CmoCh09G006100	Cucurbita moschata (Rifu)	carcmoB0865
Carg03036	Cp4.1LG06g03740	Cucurbita pepo (Zucchini)	carcpeB0906
Carg03036	Cp4.1LG02g03650	Cucurbita pepo (Zucchini)	carcpeB0899
Carg03036	MELO3C003473.2	Melon (DHL92) v3.6.1	carmedB0640
Carg03036	CsaV3_3G048460	Cucumber (Chinese Long) v3	carcucB0666
Carg03036	Cla97C01G017390	Watermelon (97103) v2	carwmbB0655
Carg03036	Cla97C11G221050	Watermelon (97103) v2	carwmbB0656
Carg03036	Bhi09G002162	Wax gourd	carwgoB0752

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03036	Carg00391	Silver-seed gourd	carcarB554

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03036	Silver-seed gourd	carcarB066
Carg03036	Silver-seed gourd	carcarB424
Carg03036	Cucumber (Gy14) v2	carcgybB0632
Carg03036	Cucurbita maxima (Rimu)	carcmaB0889
Carg03036	Cucurbita maxima (Rimu)	carcmaB0892
Carg03036	Cucurbita maxima (Rimu)	carcmaB0897
Carg03036	Cucurbita maxima (Rimu)	carcmaB0900
Carg03036	Cucurbita moschata (Rifu)	carcmoB0873
Carg03036	Cucurbita moschata (Rifu)	carcmoB0868
Carg03036	Cucurbita moschata (Rifu)	carcmoB0877
Carg03036	Cucurbita pepo (Zucchini)	carcpeB0894
Carg03036	Cucurbita pepo (Zucchini)	carcpeB0907
Carg03036	Bottle gourd (USVL1VR-Ls)	carlsiB575
Carg03036	Wax gourd	carwgoB0751