CSPIUnG00150 (gene) Wild cucumber (PI 183967)

NameCSPIUnG00150
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationScaffold000091 : 173797 .. 174564 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGGTATCTTTATATAAGATAAATGCTACTAATGCTTGGACCGATAAAAGTTTCACATGCCTTTTAAAGTTATTGCATATCCTAAAATCTACTTATTATGAAGTAAAGAAGTTCTTAAAAGTATTTGATTTAGAATATGAAAAGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGTGGATAAGCGCACAAAAAGAATGAAACAAGGTGTTTCAACAAAAATGTTAAGATATTTTCCATTGGTTACATCACTGAAATGAATGTTCCAAACGTAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA

mRNA sequence

ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA

Coding sequence (CDS)

ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA
BLAST of CSPIUnG00150 vs. TrEMBL
Match: A5ALA4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030059 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1

Query: 8   ISYSCKTCRNMNNQTFDVVYEHLIMKGMDPTYRFWYHHGEEVP-------VECIFDGQTF 67
           I   C  C N+  QT  V+ EHL   G+D +YR WY HGE+ P        +  +D   +
Sbjct: 37  IKCPCLRCGNLLCQTPQVIREHLFFNGIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCEY 96

Query: 68  CSTSFTSDVKVDEPLVNSDVNQKVVDENTSLYPRCTKYTRMSV---VIRACENDCCLFMK 127
              + T D  V+   +  D+     +   S+Y     ++ + +    I AC NDC L+  
Sbjct: 97  NDVABTID-XVNXAQLLGDMLPLNNEMPLSMYEAKKTFSALGMEYXKIHACPNDCILYRN 156

Query: 128 DNKDLETRPICGHSRWK---------------------------------DVAEFLTWHM 177
             KD    P CG SRWK                                 + A+ L WH 
Sbjct: 157 QYKDAIACPTCGKSRWKINSEGGKIKKGVPAKVLWYFPPIPRFKRMFQSSETAKHLMWHA 216

BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q7XWT6_ORYSJ (OSJNBa0028M15.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0028M15.5 PE=4 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11
Identity = 60/236 (25.42%), Postives = 87/236 (36.86%), Query Frame = 1

Query: 6   DKISYSCKTCRNMNNQTFDVVYEHLIMKGMDPTYRFWYHHGEEVPVEC--------IFDG 65
           D+I   C  C N        V +H++M GMD TY  W HHGE++ V          +FD 
Sbjct: 38  DEILCPCTRCLNQKYLHQPTVKKHILMNGMDCTYTRWVHHGEDISVHVNEVPASVSVFDT 97

Query: 66  QTFCSTSFTSDVKVDEPLV----------------------NSDVNQK-------VVDEN 125
                    +D  V + L                       N+D N +       V +  
Sbjct: 98  DEGSIGMAQTDNNVGDRLDSLLSDLQTARGHGSHDSEPENGNNDGNSQTSFLKLLVKEAK 157

Query: 126 TSLYPRCTKYTRMSVVIRACENDCCLFMKDNKDLETRPICGHSRWKDV------------ 176
             LYP C K+++ S V             D  DL+  P+CG SRWKD             
Sbjct: 158 RQLYPGCAKFSKFSFV-------------DYSDLDNCPVCGLSRWKDPQRKKIPQKVLRH 217

BLAST of CSPIUnG00150 vs. TrEMBL
Match: A0A0A0KCH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G237080 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.3e-11
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 1

Query: 5  VDKISYSCKTCRNMNNQTFDVVYEHLIMKGMDPTYRFWYHHGEEVPVE 53
          VD I   CK CR+M++Q+FD+VYEHL++KGMDPTY+  YHHGEEV V+
Sbjct: 39 VDLIMCPCKDCRDMSHQSFDIVYEHLVIKGMDPTYKILYHHGEEVCVK 86

BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q9ZUQ4_ARATH (Putative TNP2-like transposon protein OS=Arabidopsis thaliana GN=At2g12210 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-10
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 1

Query: 105 IRACENDCCLFMKDNKDLETRPICGHSRWK------------------------------ 164
           I AC NDCCLF K  K+LE  P C  SRWK                              
Sbjct: 204 IHACVNDCCLFRKRYKNLENCPKCNASRWKSNMQTGEAKKGVPQKVLRYFPIIPRFKRMF 263

Query: 165 ---DVAEFLTWHMSHKSSDEKMCHPVDCISWDSIDAKWPDF 173
              ++A+ L WH S+KS+D K+ HPVD ++WD ++ K+P+F
Sbjct: 264 RSEEMAKDLRWHYSNKSTDGKLRHPVDSVTWDKMNDKYPEF 304

BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q9C7I6_ARATH (CACTA-element transposase, putative OS=Arabidopsis thaliana GN=T9I1.5 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-10
Identity = 37/101 (36.63%), Postives = 49/101 (48.51%), Query Frame = 1

Query: 105 IRACENDCCLFMKDNKDLETRPICGHSRWK------------------------------ 164
           I AC NDCCLF K  K+LE  P C  SRWK                              
Sbjct: 29  IHACVNDCCLFRKRYKNLENCPKCNASRWKSNMQTGEAKKGVPQKVLRYFPIIPRFKRMF 88

Query: 165 ---DVAEFLTWHMSHKSSDEKMCHPVDCISWDSIDAKWPDF 173
              ++A+ L WH S+KS D K+ HPVD ++WD ++ K+P+F
Sbjct: 89  RSEEMAKDLRWHYSNKSIDGKLRHPVDSVTWDKMNDKYPEF 129

BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|659131085|ref|XP_008465501.1| (PREDICTED: uncharacterized protein LOC103503122 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37
Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 1

Query: 18  MNNQTFDVVYEHLIMKGMDPTYRFWYHHGEEVPVECIFDGQTFCSTSFTSDVKVDEPLVN 77
           MN+QTFDVVYEHL++KGMDPTYRFWYHHGEEVPV+C+FDGQ FCSTSF SD KVDEP VN
Sbjct: 1   MNHQTFDVVYEHLVIKGMDPTYRFWYHHGEEVPVKCMFDGQPFCSTSFMSDEKVDEPCVN 60

Query: 78  SDVNQKVVDENTSLYPRCTKYTRMSVVI 106
            DVN+KVVD NTSLYP CTKYTRMS V+
Sbjct: 61  DDVNEKVVDANTSLYPHCTKYTRMSDVV 88

BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|147853387|emb|CAN80203.1| (hypothetical protein VITISV_030059 [Vitis vinifera])

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1

Query: 8   ISYSCKTCRNMNNQTFDVVYEHLIMKGMDPTYRFWYHHGEEVP-------VECIFDGQTF 67
           I   C  C N+  QT  V+ EHL   G+D +YR WY HGE+ P        +  +D   +
Sbjct: 37  IKCPCLRCGNLLCQTPQVIREHLFFNGIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCEY 96

Query: 68  CSTSFTSDVKVDEPLVNSDVNQKVVDENTSLYPRCTKYTRMSV---VIRACENDCCLFMK 127
              + T D  V+   +  D+     +   S+Y     ++ + +    I AC NDC L+  
Sbjct: 97  NDVABTID-XVNXAQLLGDMLPLNNEMPLSMYEAKKTFSALGMEYXKIHACPNDCILYRN 156

Query: 128 DNKDLETRPICGHSRWK---------------------------------DVAEFLTWHM 177
             KD    P CG SRWK                                 + A+ L WH 
Sbjct: 157 QYKDAIACPTCGKSRWKINSEGGKIKKGVPAKVLWYFPPIPRFKRMFQSSETAKHLMWHA 216

BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|923904925|ref|XP_013722594.1| (PREDICTED: uncharacterized protein LOC106426416 [Brassica napus])

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15
Identity = 65/187 (34.76%), Postives = 96/187 (51.34%), Query Frame = 1

Query: 12  CKTCRNMNNQTFDVVYEHLIMKGMDPTYRFW---YHHGEEVP-VEC---IFDGQTFCSTS 71
           C  CRN++  + DVV ++L+ +GMD +++     YHHGE +   +C     +        
Sbjct: 36  CIDCRNVDRHSADVVVDYLVTRGMDLSFKLREDRYHHGEVISGADCRKNASERNKEILGL 95

Query: 72  FTSDVKVDEPLVNSDVNQKVVDENTSLYP--RCTKYTRMSVV-IRACENDCCLFMKDNKD 131
           + +   +DE L+ S + ++ V  +TSLY   R  K   M    I AC NDCCLF K+ + 
Sbjct: 96  YQAAEFLDEDLLGSMLPEENV-LHTSLYEVKRFLKSIDMGYEKIHACVNDCCLFRKEFEK 155

Query: 132 LETRPICGHSRWK-----------DV-----AEFLTWHMSHKSSDEKMCHPVDCISWDSI 173
           L+  P C  SRWK           DV      E L  H S+KS+D K  HPVD ++WD +
Sbjct: 156 LDNCPKCNASRWKINMRTGDVKKEDVQVRGNGEGLKVHFSNKSTDGKSRHPVDSVTWDQM 215

BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|764594767|ref|XP_011465697.1| (PREDICTED: uncharacterized protein LOC105351846 [Fragaria vesca subsp. vesca])

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 42/105 (40.00%), Postives = 50/105 (47.62%), Query Frame = 1

Query: 105 IRACENDCCLFMKDNKDLETRPICGHSRWK------------------------------ 164
           I AC NDCCLF K  + +ET P C  SRWK                              
Sbjct: 112 IHACVNDCCLFRKKLEKVETCPTCDASRWKVNKHTQKIEEGVPAKVLRYFPIIPRFRRMF 171

Query: 165 ---DVAEFLTWHMSHKSSDEKMCHPVDCISWDSIDAKWPDFLNDP 177
              + AE LTWH +HKS D KM HPVD ++W  +D+KWP F  DP
Sbjct: 172 KDSEKAEQLTWHHTHKSQDGKMRHPVDSLAWKKVDSKWPSFAKDP 216

BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|657993335|ref|XP_008388951.1| (PREDICTED: uncharacterized protein LOC103451310 [Malus domestica])

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 42/105 (40.00%), Postives = 52/105 (49.52%), Query Frame = 1

Query: 105 IRACENDCCLFMKDNKDLETRPICGHSRWK------------------------------ 164
           I AC NDCCLF KD + L T P CG SRW+                              
Sbjct: 103 IDACVNDCCLFWKDFEQLXTCPKCGXSRWQVGKRNNHIXKGVSAKVLRYFPIIPRFKRMF 162

Query: 165 ---DVAEFLTWHMSHKSSDEKMCHPVDCISWDSIDAKWPDFLNDP 177
              D+A+ LTWH ++KS D KM HP D   W+SID ++PDF +DP
Sbjct: 163 KDDDMAKDLTWHHTNKSQDGKMRHPXDSPXWESIDTRYPDFASDP 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A5ALA4_VITVI2.2e-1528.30Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030059 PE=4 SV=1[more]
Q7XWT6_ORYSJ1.9e-1125.42OSJNBa0028M15.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0028M15.5 PE=4 ... [more]
A0A0A0KCH8_CUCSA7.3e-1164.58Uncharacterized protein OS=Cucumis sativus GN=Csa_6G237080 PE=4 SV=1[more]
Q9ZUQ4_ARATH3.6e-1036.63Putative TNP2-like transposon protein OS=Arabidopsis thaliana GN=At2g12210 PE=4 ... [more]
Q9C7I6_ARATH8.1e-1036.63CACTA-element transposase, putative OS=Arabidopsis thaliana GN=T9I1.5 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659131085|ref|XP_008465501.1|1.7e-3782.95PREDICTED: uncharacterized protein LOC103503122 [Cucumis melo][more]
gi|147853387|emb|CAN80203.1|3.1e-1528.30hypothetical protein VITISV_030059 [Vitis vinifera][more]
gi|923904925|ref|XP_013722594.1|3.1e-1534.76PREDICTED: uncharacterized protein LOC106426416 [Brassica napus][more]
gi|764594767|ref|XP_011465697.1|1.7e-1340.00PREDICTED: uncharacterized protein LOC105351846 [Fragaria vesca subsp. vesca][more]
gi|657993335|ref|XP_008388951.1|1.9e-1240.00PREDICTED: uncharacterized protein LOC103451310 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPIUnG00150.1CSPIUnG00150.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 5..176
score: 4.6
NoneNo IPR availablePANTHERPTHR10775:SF96SUBFAMILY NOT NAMEDcoord: 5..176
score: 4.6

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None