CSPIUnG00150 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGGTATCTTTATATAAGATAAATGCTACTAATGCTTGGACCGATAAAAGTTTCACATGCCTTTTAAAGTTATTGCATATCCTAAAATCTACTTATTATGAAGTAAAGAAGTTCTTAAAAGTATTTGATTTAGAATATGAAAAGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGTGGATAAGCGCACAAAAAGAATGAAACAAGGTGTTTCAACAAAAATGTTAAGATATTTTCCATTGGTTACATCACTGAAATGAATGTTCCAAACGTAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA ATGTCGGGTGGAGTAGACAAAATTTCATATTCATGCAAGACATGTAGGAACATGAATAATCAAACCTTTGATGTTGTATATGAACATTTGATTATGAAAGGTATGGATCCTACTTATAGGTTTTGGTACCATCATGGTGAAGAAGTACCGGTAGAGTGTATATTTGATGGCCAAACCTTTTGTAGTACTTCTTTCACGAGCGACGTAAAAGTTGATGAACCATTAGTAAATAGTGATGTTAATCAAAAGGTTGTAGATGAAAATACTTCTTTGTACCCTCGTTGTACAAAATATACAAGAATGTCAGTTGTGATTCGTGCTTGTGAAAATGATTGTTGCTTGTTTATGAAAGATAATAAAGATTTAGAGACGCGTCCAATTTGTGGACATTCTCGATGGAAGGATGTAGCTGAATTTCTAACATGGCATATGAGCCATAAAAGTTCTGATGAGAAGATGTGTCATCCAGTCGATTGTATTTCATGGGACTCAATTGATGCAAAGTGGCCAGACTTTTTGAATGATCCA
BLAST of CSPIUnG00150 vs. TrEMBL
Match: A5ALA4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030059 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15 Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1
BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q7XWT6_ORYSJ (OSJNBa0028M15.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0028M15.5 PE=4 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11 Identity = 60/236 (25.42%), Postives = 87/236 (36.86%), Query Frame = 1
BLAST of CSPIUnG00150 vs. TrEMBL
Match: A0A0A0KCH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G237080 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.3e-11 Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 1
BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q9ZUQ4_ARATH (Putative TNP2-like transposon protein OS=Arabidopsis thaliana GN=At2g12210 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.6e-10 Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 1
BLAST of CSPIUnG00150 vs. TrEMBL
Match: Q9C7I6_ARATH (CACTA-element transposase, putative OS=Arabidopsis thaliana GN=T9I1.5 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.1e-10 Identity = 37/101 (36.63%), Postives = 49/101 (48.51%), Query Frame = 1
BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|659131085|ref|XP_008465501.1| (PREDICTED: uncharacterized protein LOC103503122 [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37 Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 1
BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|147853387|emb|CAN80203.1| (hypothetical protein VITISV_030059 [Vitis vinifera]) HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15 Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1
BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|923904925|ref|XP_013722594.1| (PREDICTED: uncharacterized protein LOC106426416 [Brassica napus]) HSP 1 Score: 90.5 bits (223), Expect = 3.1e-15 Identity = 65/187 (34.76%), Postives = 96/187 (51.34%), Query Frame = 1
BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|764594767|ref|XP_011465697.1| (PREDICTED: uncharacterized protein LOC105351846 [Fragaria vesca subsp. vesca]) HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13 Identity = 42/105 (40.00%), Postives = 50/105 (47.62%), Query Frame = 1
BLAST of CSPIUnG00150 vs. NCBI nr
Match: gi|657993335|ref|XP_008388951.1| (PREDICTED: uncharacterized protein LOC103451310 [Malus domestica]) HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12 Identity = 42/105 (40.00%), Postives = 52/105 (49.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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