CSPI07G01700 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTGCTTGAACTTCCTGTTTTTGCAGTTTGTTCAACTTCTCTAAAGTGGATATGCAGGCAACATGGATAACAAGGTGCCCTTCCAGAAAGATCAAGAAAGTAGGTCATTATTCTCTCAGCAAACTCCAGCTCGTGGTCGACTCAGTTCAAGGTGCTGATGGTTCGATACAGATTGGGACTTTCTATGAAAGCTTCCCACAATTGAACAATCCCAGTTTTCCTGATACTGACCATTGTTCATCCACGATGGTGAGAGACCATCAGAGGCAATAAACTATCAAGTTGGCAATGGCTCGTTCAGCCATCGACCCCATGCAAAGTCCCCATTCTCTTCATGTACTCAGACTTCTGGTTCAGGCAGTTAGTGCCCTACCGGAGCAAGGCAACATAATCCAATGGATTTTTCAGCAAACTTTAAAAAGCTCAATT ATGCAGGCAACATGGATAACAAGGTGCCCTTCCAGAAAGATCAAGAAAGTAGGTCATTATTCTCTCAGCAAACTCCAGCTCGTGGTCGACTCAGTTCAAGGTGCTGATGGTTCGATACAGATTGGGACTTTCTATGAAAGCTTCCCACAATTGAACAATCCCAGTTTTCCTGATACTGACCATTGTTCATCCACGATGGTGAGAGACCATCAGAGGCAATAA ATGCAGGCAACATGGATAACAAGGTGCCCTTCCAGAAAGATCAAGAAAGTAGGTCATTATTCTCTCAGCAAACTCCAGCTCGTGGTCGACTCAGTTCAAGGTGCTGATGGTTCGATACAGATTGGGACTTTCTATGAAAGCTTCCCACAATTGAACAATCCCAGTTTTCCTGATACTGACCATTGTTCATCCACGATGGTGAGAGACCATCAGAGGCAATAA
BLAST of CSPI07G01700 vs. Swiss-Prot
Match: NLP2_ARATH (Protein NLP2 OS=Arabidopsis thaliana GN=NLP2 PE=2 SV=3) HSP 1 Score: 74.3 bits (181), Expect = 6.1e-13 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 1
BLAST of CSPI07G01700 vs. Swiss-Prot
Match: NLP1_ARATH (Protein NLP1 OS=Arabidopsis thaliana GN=NLP1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 8.0e-13 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. Swiss-Prot
Match: NLP3_ARATH (Protein NLP3 OS=Arabidopsis thaliana GN=NLP3 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-10 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. Swiss-Prot
Match: NLP4_ARATH (Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-09 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1
BLAST of CSPI07G01700 vs. Swiss-Prot
Match: NLP1_ORYSJ (Protein NLP1 OS=Oryza sativa subsp. japonica GN=NLP1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.6e-08 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1
BLAST of CSPI07G01700 vs. TrEMBL
Match: A0A0A0K676_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024110 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.5e-31 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. TrEMBL
Match: M5VGP2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018195mg PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-16 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 1
BLAST of CSPI07G01700 vs. TrEMBL
Match: T1SBU4_DATGL (Nodule inception protein 1 OS=Datisca glomerata GN=NIN1 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-15 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 1
BLAST of CSPI07G01700 vs. TrEMBL
Match: V4U8W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027765mg PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 7.8e-15 Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. TrEMBL
Match: A0A061DXA4_THECC (Plant regulator RWP-RK family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006453 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.7e-14 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1
BLAST of CSPI07G01700 vs. TAIR10
Match: AT4G35270.1 (AT4G35270.1 Plant regulator RWP-RK family protein) HSP 1 Score: 74.3 bits (181), Expect = 3.5e-14 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 1
BLAST of CSPI07G01700 vs. TAIR10
Match: AT2G17150.1 (AT2G17150.1 Plant regulator RWP-RK family protein) HSP 1 Score: 73.9 bits (180), Expect = 4.5e-14 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. TAIR10
Match: AT4G38340.1 (AT4G38340.1 Plant regulator RWP-RK family protein) HSP 1 Score: 65.5 bits (158), Expect = 1.6e-11 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. TAIR10
Match: AT1G20640.1 (AT1G20640.1 Plant regulator RWP-RK family protein) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-10 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1
BLAST of CSPI07G01700 vs. TAIR10
Match: AT1G76350.1 (AT1G76350.1 Plant regulator RWP-RK family protein) HSP 1 Score: 56.6 bits (135), Expect = 7.5e-09 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 1
BLAST of CSPI07G01700 vs. NCBI nr
Match: gi|659094517|ref|XP_008448104.1| (PREDICTED: zinc finger protein ZAT3 [Cucumis melo]) HSP 1 Score: 144.4 bits (363), Expect = 7.7e-32 Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1
BLAST of CSPI07G01700 vs. NCBI nr
Match: gi|700188103|gb|KGN43336.1| (hypothetical protein Csa_7G024110 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 5.0e-31 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of CSPI07G01700 vs. NCBI nr
Match: gi|595790583|ref|XP_007199040.1| (hypothetical protein PRUPE_ppa018195mg [Prunus persica]) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-15 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 1
BLAST of CSPI07G01700 vs. NCBI nr
Match: gi|645260780|ref|XP_008235979.1| (PREDICTED: LOW QUALITY PROTEIN: protein NLP2-like [Prunus mume]) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-15 Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 1
BLAST of CSPI07G01700 vs. NCBI nr
Match: gi|526483237|gb|AGR88904.1| (nodule inception protein 1 [Datisca glomerata]) HSP 1 Score: 89.0 bits (219), Expect = 3.9e-15 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |