CSPI06G04160 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G04160
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Short-chain dehydrogenase/reductase family protein
Location	Chr6 : 3844497 .. 3850517 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGGAAAATTTCTACCGCGCGAAAATGGCTTCTTCAACTTCTTCTTCTTCCTCCCTCCTCTTCACGTCTCCGTTCATCGCCCACAACCATGGCTTCTTCATCTCTCCTCCTTCTCAAAGTCGCTTATCACTCCACAAATTCAGGAGTTTCAGTCTTTCCATACCTCCTTCGAGAAAGATTTCCAACATTCCGACGAACAGCGTCGTGAATTCCAATTCCGTATCCACAAAGCCCGAAGAATTTCAGCAGAAGGAGCCTATGGTTCCTCCTTACAACGTTTTGATCACTGGTTCCACTAAAGGTGTGCTGGTCTTTCTTTCGTCTATTTTTCGTTCGCTGGCTTCTCATGTCGTTTTTGCTAGCAAGAAATGCGGAACTGCTGTTGTCTTTTTAGCTCTATTTTCAGCTGTTTGATGAAAAATTTGATGGCGGAATGTGTGTTTGTATGTGTTATGGACTTGAATTTTGTAGGAATCGAGTTTGAGAAACTTTCTAGTTGTCGTTTTTAAGAATTGGAAGATGTGTTTTAGAAATGATTTCAGCTGTATAGTTGGAATTTAGATTAGTGAGGTTTAATGTTTAGTTGAGATTTGCGAGCTTATTTCACATGATTGAAGTTAAACTTAATGTTTGGAAAGATGTTTAAAAACATCATTTGTTAGGAACGGGATTGGCAAGAAGATGATTGAAGTTTGAGCTCTTAAAATGGAGTGTTAAAGTATATTTTGAATTTTTATGTTATACATAATCCAAATAAATTAAGCCCTTGTTCATATGATTTTATAACTATATTGCTTTGGACCAAAGTCAATTCTGCGGAAAATGTTTGTTATATTTTAACATAATAACCTCAATTCTCTTGTCCGTGTAATAGTTATATTCTAATCTACTTACATTTCCTTGGAACTTGATGGAGTTATTTTTATTTTTTATAATGAGAGCTTACAAAGAATTTGCTGGTTCTATCTTCTTTTACACTTCAGCGCCTTTGACTTTCGTATTGGCATTCTCATAGAGGTTTCTACTAATATTTGCAAATTATCCAGGAATAGGATATGCATTGGCCAGACAGTTTCTGAAAGAAGGTGACAATGTTGTTATCTGCTCAAGATCAGGTAACGTTTGCACTATAATCACCATGCACACTCGCAAGTCGCACAGGATTCTGAATGTATGTACAGGATTGTAGAACATTTCAGAATGATTGTAGGATACTATGTAAAATGGGCTTGGTTTTCCTTTATATTTTAATTTCAAAGATGTGGTTTCTTATGTAGTTATGTGTTTGTAGTTATTTTTATTTTTTATACATGCCTGGTGCTGCACATTTATTAGTTTTTGTGTTAAGTGATTAGGTATGGATTTTAGTAATTCGCTAGATCTTGCACCTTTTCAGTTTTTGTGTTGATTCCTCTTTTCTCTTTTTCGCTGATGTAGGATTATTAAGATGCTTGAAATATTGTAAATCTGTGTTTATTTCCATTTTGAATGATGGTCGGTGCCGGCATCCTTAGTAGGGTGTGCCTTGCACTAGTTAAAGCAGTTCTATGCACTAAAGTTAAGATCTGGAAGCAGTTTAAGATTCGTCTATTAATGAAATGCACGATTTCACATTAGCTCAACGAACCTTTTAACAGCTGAGAGGGTTGAATCTTCTGTTCAAAGCTTGAGAGAAGAATTTGGGGAGCAGCGTGTGTGGGTACCTCCTGCTAGACTTTTGCATTTTAATTTTCTCTGCAGAAGTTTAGTTACCATTTCTCAATCATTTCATTGTCTTCCATGTACTATTTGCAATTGGAGGAGTTGCTGATACTTCAAGCTCATTGTCTTAAATCCTTTTCAGGGTACTAAATGTGATGTGCGAGAAGGGGAGGATGTAAAGAATTTAGTCGCATTTTTGCAGAAAAATCTTAAATATGTTGACATTTGGGTATCTACTTCAAATTCTTTTTTCTCTTCCTCTTCTACATAAAGAATGATAAGTATATCTTAACTTGTATTTTCTAGTGACCAGAATACATGTTTATTTGGTATCGTAGATTCTAAACAATAATTCTACTCTGAAAAGAAAAAAAAAACATAATTAATATTGAATATATTAGATAGGTGGCCTAAAGCTAAGACAGTTCTTAGATATTCTTGGTCAAATTATACATTTTCATAATTTATAATTACAATATAGCGTTGTCTGCATATCAAAGGAAACTGGACTTGAGATCTAGAAGCATTTCATTGTCTACTATTTAAGCTATCGATCAATTTTGAAGGCCACGAGAGGATATTACAAGTCTGCTGTTTTATGCCCTATTATTAGTTTGGTGGAATTTTGTTTGCTTTTATTGCTATTTTAACTTATTGCAAGAACAATGCAGATCAATAATGCAGGATCAAATGCTTATAGCTTTAAGCCTTTGGTTGAGGCTTCAGATGAAGATCTTATGTGAGCTTCCTCCTTTTGATCTCCAAACCTCAATGACATGAAATAGAAATCCTTTTAGTTTATTATTTAGACACTCTCTAATGCAGTGAAGTTGTCACTACAAATGCTCTTGGTTTGATGATATGTTGCCGAGAGGTATATACTGCTTCAATCACGAACTCTATTGTATTTTTGACATGTAACTCATGCATAATTTCTAACTTCTTGTTTAGGCAATAAAGATGATGTTAAACCAACCTCGCGGGGGTCATATTTTCAACATTGATGGGGCTGGTTCTGATGGACGACCCACCCCTAGGTGCCATTCTTTTTATCACTTGCATTCTTTCTCTATTGTCTGAGCTCGATATGATGTTCTTTATCTTATGTGCTTTTTTTTCAAGAAAAATCTAGATGACATGAGAAAAGCACAAGAAATCTGTGATGTATTTGAATATCATGCAGTGTGCTCAATCTTATATGATGTAACTGCTTTAGAATTGTAGCAGTGCAATGGCACATGCCAATTGCACATGTCATTTTATTCCCTTTACTTGAATAACGGATGGAGCAAATAATTTTATGCTGAAACATCTAAGACTATAATAACCACCACTTTGTTACAGTAAATACTATTTAAAAGTTTCCAATTAGCTACAATAAACACTATTTCAAAGCCCTTAATTTGCTACAGTATTTATTAACATACAATTTTTTATTCTTTGCTACAGTGTTTGCCGTTTCATTCTCGAACTAAAATAGTTCACACCTTAAACATATACTATTATAACTTAAACTAAAATAATCTACACTCCAAACACAAACTATTGTAATCCAACTAAAATAACCTAGGACTACAATAACTTACTTCTTGCTCCAAACACCCTCTAGAGGTACTTAAGCATTTATGATGAATATAGAGATACCTCTACCTCATGTGAAATTATTAGGATGGGCCCAATCAGTTTGAACATCTATACTAGACAAGACATAAAAATTGGTATCAGAAAACTAAATTATGGTAATGATTGGTTTTGTCTTTGGTAAGATTAGCGTTGTGTTTATGTAGTGATCACTCACGCAGAAATGTTGTTGGCTGATAATTCTGTCTTTCCTTAGGTTTGCTGCATACGGGGCAACTAAAAGAAGTGTTGTCCATTTAACGAAGTCGTTACAGGTTCTGGCTACATGAGCTTCTCTCTTGACTCTCTTTTTCCCAAATAAATTAAGTTTGTCAGGATTGTTCTTTAAATAGGAAGCATCGATGTGTTATGCAGCATGAGTAGCCTGCATCAGTTCTGTTTGATTCAAATATAGTAGACATACCGAGGATGATTAATTTCAACAATGTATAAGATTGGGAAAAAAAACTTTTAGCATTTGGAGTGCCTATCTGGGATGGTCTTAGTCATGAAGATCCCTGGGTTGCTTTATGGGGTGAATAATCATTTCAAGAACTAACTACCATCAGAATCTAATAATAAAGTCCGAGGAAAGTCCCTGCCATCAAGACTTTAGAGTACTAAGGTTTCACCAAGCAACAAATTATAATTGAAGTGGGTTTGTCATTGGCTGTTAAAAATACAAAGCATCTTCATATCTTGTTCCTCCTCTTACTTACTCCTTTCAATTCCTTTTGGCTTTTCTTGTTAATATTTGCAGGCAGAACTGCGGATGCAGGACGTGAAAAATGTTGTAGTGCACAATCTTTCGGTGTGTTAATACTACCACAGTATTTATGCTTTCAATTTTAGTGTAAAACTTTCTATCTCAACACTTTTGTCAAAGACTCAAAATTGCTTGTGAAGTTTATTTATGTTTCTCTGATGATTTTTCTGTGATGTTTTGAATCTTGCATCATTTTTTAAAATAAGACCCTTGATATTCCAAGAGATATATTCAAGAGCATAATATATTGAAATCGTGAAATTTCATATCATGTAAGGTACATTAGAATGATTCTTAACACCACATAATTCTATCTTACTTTCTTTACCTGATAATGCTATTTGTGTTTTTTGGTCTTGCAGCCTGGGATGGTTACAACCGATCTTCTTATGTCTGGTGCCGATACGAAGCAGGTTGTTTAGGCATTATAATTTCTTTTAAATTAAATGTTATTAAGAAATTCATGAATTTGGATAATTTAGATTTGTTGCCCTCTTGCAGGCAAAATTTTTCATCAATGTTTTGGCGGAACCACCTGAAGTGGTAAGATTATGCTTTGAATTTCTTTATCTCCACATCGATATTTAATTTTCTTAGCATGCAGTTGACAGTGTCTTATTCTGTAAATGACCTTGATCTTGATCCAAATCAACATATTGCTTGGTTATAAACCTAAGAACATTTCCTCTTATATCAAATCTCATTCACGATTGTGAATTTTATTTAGCATAACAATTTGCATATTTGGTATTCAGTTTTGAAAAAAAAGAGTAGTTTTCATACGTTTTTGGACAAATGTCAATTTGAACTCAGAATTTTGGAGGTTCAATTTAAACTCTGAGCTTTGGGACTGTCTCAATTTAGACCTCAAACTAATAATTATATCAAATTAGACCATGAATTTTTATAAATTTATCAATTTAGACTTTGAACTTTCGTAAATATATCAATTTAAAACCTCTTATGTAATAAGATTAGTTGACATGGCTATTGTTAGAAACAGTGGGCTTGGGTCATGTTGAAAGCTCAAGGATAGTTGAGACTTTATTTAAGCTCGTGTTGCCTATAAATATTTTTTCTTTTGTATATTTGTTATCTAAAAAAAATAATAAGAAACATAGCATCGCCCAGTACTAGGATTTCCACGTAAATTTGTGTTTGTTCTATATCTTTACTTACAATAGCTACTAACATTATAACTATAGATGATTAAAAGCTCTACTTCCAATAGCTAGTAACATCATAATTAGTAATCACACTAAATTTATAGATGATTAAAAGCCTTATAATTCCTTTTGAATCAGTCTTCATCTGGCGGTTGATATTTGAGTTTACAGGTGGCAGAATATCTCGTCCCAAACATAAGATCTATCCCAACCAATGGATCAACAAGGCCCACATACATTCGTTTCCTCACTGGACTAAAAGCTTATTCCCAGATTTTCTCAGTTAAGAAATGAATCAAGTTAGAATTGTTGTGTTTAATTTCATCCATTCTTGGTGCCATCATTTAATTGTTTGATGTTTCTGATGTCAATTCAGAGACTTGCTTTTGGTGCAAGAAGAAACAGATATTTTCTAGAAGATTGATAAGAAAAAGAATATTTTTTCGTAAGTTCTCTTCTGGATCTCTATCAAGTTTCTCATTTATTGTCCTTCACCTCACCCAGTGGAATGGTTTATATTCACAATTTGTTCACTGGCCATATTGATAAAGCATCGTGGACCCATTGGACTGCTCCTTAAACACGACGCAAACGAAATGATGCCTTGTCTTTCACCTCTCCCTCCCTCCCTCTCTGTAAAAACTGTTGTTGTTTTTTTTTTTTCCATTGATTTACTCGATAAATGATTAATTGTAATTTACCATTTATATTTACTTTAAAAGTTGTAGCGCTTACCACTTTTTTTTAAAAAATTGTTTTTACCATA

mRNA sequence

ATGGCTTCTTCAACTTCTTCTTCTTCCTCCCTCCTCTTCACGTCTCCGTTCATCGCCCACAACCATGGCTTCTTCATCTCTCCTCCTTCTCAAAGTCGCTTATCACTCCACAAATTCAGGAGTTTCAGTCTTTCCATACCTCCTTCGAGAAAGATTTCCAACATTCCGACGAACAGCGTCGTGAATTCCAATTCCGTATCCACAAAGCCCGAAGAATTTCAGCAGAAGGAGCCTATGGTTCCTCCTTACAACGTTTTGATCACTGGTTCCACTAAAGGAATAGGATATGCATTGGCCAGACAGTTTCTGAAAGAAGGTGACAATGTTGTTATCTGCTCAAGATCAGCTGAGAGGGTTGAATCTTCTGTTCAAAGCTTGAGAGAAGAATTTGGGGAGCAGCGTGTGTGGGGTACTAAATGTGATGTGCGAGAAGGGGAGGATGTAAAGAATTTAGTCGCATTTTTGCAGAAAAATCTTAAATATGTTGACATTTGGATCAATAATGCAGGATCAAATGCTTATAGCTTTAAGCCTTTGGTTGAGGCTTCAGATGAAGATCTTATTGAAGTTGTCACTACAAATGCTCTTGGTTTGATGATATGTTGCCGAGAGGCAATAAAGATGATGTTAAACCAACCTCGCGGGGGTCATATTTTCAACATTGATGGGGCTGGTTCTGATGGACGACCCACCCCTAGGTTTGCTGCATACGGGGCAACTAAAAGAAGTGTTGTCCATTTAACGAAGTCGTTACAGGCAGAACTGCGGATGCAGGACGTGAAAAATGTTGTAGTGCACAATCTTTCGCCTGGGATGGTTACAACCGATCTTCTTATGTCTGGTGCCGATACGAAGCAGGCAAAATTTTTCATCAATGTTTTGGCGGAACCACCTGAAGTGGTGGCAGAATATCTCGTCCCAAACATAAGATCTATCCCAACCAATGGATCAACAAGGCCCACATACATTCGTTTCCTCACTGGACTAAAAGCTTATTCCCAGATTTTCTCAAGACTTGCTTTTGGTGCAAGAAGAAACAGATATTTTCTAGAAGATTGA

Coding sequence (CDS)

ATGGCTTCTTCAACTTCTTCTTCTTCCTCCCTCCTCTTCACGTCTCCGTTCATCGCCCACAACCATGGCTTCTTCATCTCTCCTCCTTCTCAAAGTCGCTTATCACTCCACAAATTCAGGAGTTTCAGTCTTTCCATACCTCCTTCGAGAAAGATTTCCAACATTCCGACGAACAGCGTCGTGAATTCCAATTCCGTATCCACAAAGCCCGAAGAATTTCAGCAGAAGGAGCCTATGGTTCCTCCTTACAACGTTTTGATCACTGGTTCCACTAAAGGAATAGGATATGCATTGGCCAGACAGTTTCTGAAAGAAGGTGACAATGTTGTTATCTGCTCAAGATCAGCTGAGAGGGTTGAATCTTCTGTTCAAAGCTTGAGAGAAGAATTTGGGGAGCAGCGTGTGTGGGGTACTAAATGTGATGTGCGAGAAGGGGAGGATGTAAAGAATTTAGTCGCATTTTTGCAGAAAAATCTTAAATATGTTGACATTTGGATCAATAATGCAGGATCAAATGCTTATAGCTTTAAGCCTTTGGTTGAGGCTTCAGATGAAGATCTTATTGAAGTTGTCACTACAAATGCTCTTGGTTTGATGATATGTTGCCGAGAGGCAATAAAGATGATGTTAAACCAACCTCGCGGGGGTCATATTTTCAACATTGATGGGGCTGGTTCTGATGGACGACCCACCCCTAGGTTTGCTGCATACGGGGCAACTAAAAGAAGTGTTGTCCATTTAACGAAGTCGTTACAGGCAGAACTGCGGATGCAGGACGTGAAAAATGTTGTAGTGCACAATCTTTCGCCTGGGATGGTTACAACCGATCTTCTTATGTCTGGTGCCGATACGAAGCAGGCAAAATTTTTCATCAATGTTTTGGCGGAACCACCTGAAGTGGTGGCAGAATATCTCGTCCCAAACATAAGATCTATCCCAACCAATGGATCAACAAGGCCCACATACATTCGTTTCCTCACTGGACTAAAAGCTTATTCCCAGATTTTCTCAAGACTTGCTTTTGGTGCAAGAAGAAACAGATATTTTCTAGAAGATTGA

Homology

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BLAST of CSPI06G04160 vs. Swiss-Prot
Match: NOL_ARATH (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=1 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.1e-135
Identity = 244/328 (74.39%), Postives = 276/328 (84.15%), Query Frame = 1


Query: 25  FISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSVVNSNSVSTKPEEFQQKEPMVPPYN 84
           F+SP  + RL   +F   ++ +           N  V  +S + +     ++EPM PPYN
Sbjct: 30  FLSPICRRRLLAERFGLATVVVTRQ--------NLTVTPSSAAVEARISGKREPMTPPYN 89

Query: 85  VLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCDVRE 144
           +LITGSTKGIGYALAR+FLK GDNVVICSRSAERVE++VQSL+EEFGE  VWGTKCDV E
Sbjct: 90  ILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGEH-VWGTKCDVTE 149

Query: 145 GEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMICCRE 204
           G+DV+ LVA+ QKNLKY+DIWINNAGSNAYSFKPL EASDEDLIEVV TN LGLM+CCRE
Sbjct: 150 GKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCRE 209

Query: 205 AIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVV 264
           A+ MML Q RGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAEL+MQDVKNVV
Sbjct: 210 AMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVV 269

Query: 265 VHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGSTRPTYIR 324
           VHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVVAEYLVPNIR+IP +GS +PTYIR
Sbjct: 270 VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIR 329

Query: 325 FLTGLKAYSQIFSRLAFGARRNRYFLED 353
           FLTG+KAY++IFSR+A GAR+NRY  E+
Sbjct: 330 FLTGIKAYTKIFSRVALGARKNRYVTEE 348

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BLAST of CSPI06G04160 vs. Swiss-Prot
Match: NOL_ORYSJ (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 7.0e-131
Identity = 227/278 (81.65%), Postives = 251/278 (90.29%), Query Frame = 1


Query: 75  QKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQR 134
           ++  MVPPYNVLITGSTKGIGYALA++FLK GDNVVICSRSAERVES+V  L++EFGEQ 
Sbjct: 66  RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query: 135 VWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTN 194
           VWG  CDVREG+DVK LV F +  +KY+DIWINNAGSNAYS+KPLVE SDE L+EV+TTN
Sbjct: 126 VWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTN 185

Query: 195 ALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 254
            LGLMICCREAI MM NQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE
Sbjct: 186 TLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAE 245

Query: 255 LRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPT 314
           L+M +V NV+VHNLSPGMVTTDLLMSGA TKQAKFFIN+LAEP  VVA+YLVPNIR+IPT
Sbjct: 246 LQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLVPNIRAIPT 305

Query: 315 NGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           N S +PTYIRFLTGLKAYS+IFSR+AFGARRN+Y  ED
Sbjct: 306 NQSMKPTYIRFLTGLKAYSRIFSRIAFGARRNKYVAED 343

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BLAST of CSPI06G04160 vs. Swiss-Prot
Match: NYC1_ORYSJ (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.2e-55
Identity = 126/286 (44.06%), Postives = 169/286 (59.09%), Query Frame = 1


Query: 82  PYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGE--------- 141
           P NV+ITGST+G+G ALAR+FL  GD VVI SRS E V  ++  L E   E         
Sbjct: 170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQ 229

Query: 142 ------QRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDED 201
                  +V GT CDV + EDVK LV F +  L  +DIWINNAG+N   F+PLV  SDED
Sbjct: 230 REILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNK-GFRPLVNFSDED 289

Query: 202 LIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 261
           + ++V+TN +G ++C REA+ +M +Q +GGH+FN+DGAGS G  TP  A YG+TK  +  
Sbjct: 290 ISQIVSTNLVGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 349

Query: 262 LTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLV 321
              SL  E R   V    VH  SPGMV TDLL+SG+  +  + F N++ E PE VA  LV
Sbjct: 350 FQASLLKESRRSKVG---VHTASPGMVLTDLLLSGSSLRNKQMF-NLICELPETVARTLV 409

Query: 322 PNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           P +R +  +G      I +LT  +    + + +    RR R+F E+
Sbjct: 410 PRMRVVKGSGKA----INYLTPPRI---LLALVTAWVRRGRWFDEE 443

[Close]

BLAST of CSPI06G04160 vs. Swiss-Prot
Match: NYC1_ARATH (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.6e-50
Identity = 115/283 (40.64%), Postives = 168/283 (59.36%), Query Frame = 1


Query: 82  PYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSL--------------- 141
           P NV+ITGST+G+G ALAR+FL  GD V++ SRS+E V+ +V+ L               
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESA 220

Query: 142 REEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDED 201
           R++  + +V G  CDV + EDV+ L  F  K L  ++IWINNAG+N   F+PL+E ++ED
Sbjct: 221 RKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNK-GFRPLLEFTEED 280

Query: 202 LIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 261
           + ++V+TN +G ++C R A+ +M  Q  GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 281 ITQIVSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 340

Query: 262 LTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLV 321
              S+  E       NV +H  SPGMV T+LL+SG+  K  + F N++ E PE VA  LV
Sbjct: 341 FHGSIVKE---SQKTNVGLHTASPGMVLTELLLSGSSIKNKQMF-NIICELPETVARTLV 400

Query: 322 PNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYF 350
           P +R +  +G      + +LT  +    + + +    RR R+F
Sbjct: 401 PRMRVVKGSGKA----VNYLTPPRI---LLAIVTSWLRRGRWF 431

[Close]

BLAST of CSPI06G04160 vs. Swiss-Prot
Match: YDFG_SALTI (NADP-dependent 3-hydroxy acid dehydrogenase YdfG OS=Salmonella typhi GN=ydfG PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-20
Identity = 73/223 (32.74%), Postives = 115/223 (51.57%), Query Frame = 1


Query: 85  VLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCDVRE 144
           VL+TG+T G G  +AR+F++ G  V+   R  ER    +Q+L++E GE  V   + DVR 
Sbjct: 3   VLVTGATAGFGECIARRFVENGHKVIATGRRHER----LQALKDELGE-NVLTAQLDVRN 62

Query: 145 GEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMICCRE 204
              ++ ++A L    + +D+ +NNAG  A   +P  +AS ED   ++ TN  GL+   R 
Sbjct: 63  RAAIEEMMASLPAQWRDIDVLVNNAGL-ALGLEPAHKASVEDWETMIDTNNKGLIYMTRA 122

Query: 205 AIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVV 264
            +  M+ + R GHI NI G+ +   P      YGATK  V   + +L+ +L    V+   
Sbjct: 123 VLPGMVERNR-GHIINI-GSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR--- 182

Query: 265 VHNLSPGMV----TTDLLMSGADTKQAKFFINVLAEPPEVVAE 304
           V ++ PG+V     + +   G D K  K + N  A  PE + E
Sbjct: 183 VTDIEPGLVGGTEFSSVRFKGDDEKAGKTYENTTALTPEDITE 214

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BLAST of CSPI06G04160 vs. TrEMBL
Match: A0A0A0KE83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046390 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 1.1e-196
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1


Query: 1   MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV 60
           MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV
Sbjct: 1   MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV 60

Query: 61  VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE 120
           VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE
Sbjct: 61  VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE 120

Query: 121 SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV 180
           SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV
Sbjct: 121 SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV 180

Query: 181 EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT 240
           EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT
Sbjct: 181 EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT 240

Query: 241 KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV 300
           KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV
Sbjct: 241 KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV 300

Query: 301 VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED
Sbjct: 301 VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 352

[Close]

BLAST of CSPI06G04160 vs. TrEMBL
Match: W8TP72_9ROSA (Chlorophyll b reductase NOL protein OS=Pyrus x bretschneideri PE=2 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.1e-142
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 52  ISNIPTNSVVNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVI 111
           +S   +  V  S S S    + + +EPM+PPYNVLITGSTKGIGYALA++FLK GDNVVI
Sbjct: 53  LSTSDSRLVRASTSASDSGSDSESREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVVI 112

Query: 112 CSRSAERVESSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGS 171
           CSRSAERV ++VQSLR++FGEQ VWGT CDVREG+DVK+LVAF QKNLKY+DIWINNAGS
Sbjct: 113 CSRSAERVNAAVQSLRQDFGEQHVWGTNCDVREGQDVKDLVAFAQKNLKYIDIWINNAGS 172

Query: 172 NAYSFKPLVEASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPT 231
           NAYS+KPL EASDEDLIEVVTTN LGLM+CCREAIKMM NQPRGGHIFNIDGAGSDGRPT
Sbjct: 173 NAYSYKPLAEASDEDLIEVVTTNTLGLMLCCREAIKMMFNQPRGGHIFNIDGAGSDGRPT 232

Query: 232 PRFAAYGATKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFI 291
           PRFAAYGATKRSVVHLTKSLQAEL+MQDVKNV VHNLSPGMVTTDLLMSGA TKQAKFFI
Sbjct: 233 PRFAAYGATKRSVVHLTKSLQAELQMQDVKNVAVHNLSPGMVTTDLLMSGATTKQAKFFI 292

Query: 292 NVLAEPPEVVAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLE 351
           NVLAEPPEVVAEYLVPNIRS+P NGS +PTYIRFLTG+KAYSQIFSR AFGARRNRY LE
Sbjct: 293 NVLAEPPEVVAEYLVPNIRSVPANGSMKPTYIRFLTGIKAYSQIFSRFAFGARRNRYVLE 352

Query: 352 D 353
           D
Sbjct: 353 D 353

[Close]

BLAST of CSPI06G04160 vs. TrEMBL
Match: A0A067KTE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04165 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 6.8e-141
Identity = 259/331 (78.25%), Postives = 284/331 (85.80%), Query Frame = 1


Query: 27  SPPSQSRLSLHKFRSFSLSIPPSRKIS---NIPTNS--VVNSNSVSTKPEEFQQKEPMVP 86
           SP +  R    +F  ++     SR+ S      +NS  + N NS          +EPMVP
Sbjct: 16  SPLAHPRFLPPQFHGYAFFTVTSRQKSINQKQTSNSAAIANLNSPMAGNRPLINREPMVP 75

Query: 87  PYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCD 146
           PYNVLITGSTKGIGYALA++FLK GDN+VICSRSAERVES+VQ+LREEFGE+ VWGT CD
Sbjct: 76  PYNVLITGSTKGIGYALAKEFLKAGDNIVICSRSAERVESAVQNLREEFGEEHVWGTTCD 135

Query: 147 VREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMIC 206
           VREG+DVK+LVAF +K+L Y+D+WINNAGSNAYS+KPL EASDEDLIEVVTTN LGLMIC
Sbjct: 136 VREGQDVKDLVAFAKKHLNYIDLWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMIC 195

Query: 207 CREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVK 266
           CREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAEL+MQDV+
Sbjct: 196 CREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVQ 255

Query: 267 NVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGSTRPT 326
           NVVVHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVVAEYLVPNIRSIP NGS +PT
Sbjct: 256 NVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSRKPT 315

Query: 327 YIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           YIRFLTG+KAYSQIFSRLAFGARRNRY LED
Sbjct: 316 YIRFLTGIKAYSQIFSRLAFGARRNRYVLED 346

[Close]

BLAST of CSPI06G04160 vs. TrEMBL
Match: B9HKL0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s01480g PE=3 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 6.8e-141
Identity = 251/285 (88.07%), Postives = 267/285 (93.68%), Query Frame = 1


Query: 76  KEPMVPPYNVLITGSTK--------GIGYALARQFLKEGDNVVICSRSAERVESSVQSLR 135
           +EPM+PP+NVLITGSTK        GIGYALA++FLK GDNV+ICSRSAERVES+VQSLR
Sbjct: 83  REPMLPPFNVLITGSTKELVDAFNPGIGYALAKEFLKAGDNVIICSRSAERVESAVQSLR 142

Query: 136 EEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDL 195
           EEFGEQRVWGTKCDVREG+DVK+LVAF Q++LKY+DIWINNAGSNAYS+KPL EASDEDL
Sbjct: 143 EEFGEQRVWGTKCDVREGKDVKDLVAFAQESLKYIDIWINNAGSNAYSYKPLAEASDEDL 202

Query: 196 IEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHL 255
           IEVVTTN LGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHL
Sbjct: 203 IEVVTTNTLGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHL 262

Query: 256 TKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVP 315
           TKSLQAELRMQDV+NVV HNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVVAEYLVP
Sbjct: 263 TKSLQAELRMQDVQNVVAHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVP 322

Query: 316 NIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           NIRSIP NGST+PTYIRFLTG+KAYSQIFSR AFGARRNRY LED
Sbjct: 323 NIRSIPANGSTKPTYIRFLTGVKAYSQIFSRFAFGARRNRYLLED 367

[Close]

BLAST of CSPI06G04160 vs. TrEMBL
Match: M5X3D8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009825mg PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 1.2e-140
Identity = 246/274 (89.78%), Postives = 262/274 (95.62%), Query Frame = 1


Query: 79  MVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGT 138
           MVPPYNVLITGSTKGIGYALA++FLK GDNV+ICSRSAERV+S+VQSLRE+FGEQRVWGT
Sbjct: 1   MVPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVKSAVQSLREDFGEQRVWGT 60

Query: 139 KCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGL 198
            CDVREG+DVK+LV+F QK LKY+DIWINNAGSNAYSFKPL EASDEDLIEVVTTNALGL
Sbjct: 61  TCDVREGQDVKDLVSFAQKELKYIDIWINNAGSNAYSFKPLSEASDEDLIEVVTTNALGL 120

Query: 199 MICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQ 258
           M+CCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRS VHLTKSLQAEL+MQ
Sbjct: 121 MLCCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSAVHLTKSLQAELQMQ 180

Query: 259 DVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGST 318
           DVKNV +HNLSPGMVTTDLLMSGA TKQAKFFINVLAEPPEVVAEYLVPNIRS+P NGS 
Sbjct: 181 DVKNVAMHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPPEVVAEYLVPNIRSVPANGSM 240

Query: 319 RPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           +PTYIRFLTG+KAYSQIFSR AFGARRNRY LED
Sbjct: 241 KPTYIRFLTGIKAYSQIFSRFAFGARRNRYVLED 274

[Close]

BLAST of CSPI06G04160 vs. TAIR10
Match: AT5G04900.1 (AT5G04900.1 NYC1-like)

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-136
Identity = 244/328 (74.39%), Postives = 276/328 (84.15%), Query Frame = 1


Query: 25  FISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSVVNSNSVSTKPEEFQQKEPMVPPYN 84
           F+SP  + RL   +F   ++ +           N  V  +S + +     ++EPM PPYN
Sbjct: 30  FLSPICRRRLLAERFGLATVVVTRQ--------NLTVTPSSAAVEARISGKREPMTPPYN 89

Query: 85  VLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCDVRE 144
           +LITGSTKGIGYALAR+FLK GDNVVICSRSAERVE++VQSL+EEFGE  VWGTKCDV E
Sbjct: 90  ILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGEH-VWGTKCDVTE 149

Query: 145 GEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMICCRE 204
           G+DV+ LVA+ QKNLKY+DIWINNAGSNAYSFKPL EASDEDLIEVV TN LGLM+CCRE
Sbjct: 150 GKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCRE 209

Query: 205 AIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVV 264
           A+ MML Q RGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAEL+MQDVKNVV
Sbjct: 210 AMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVV 269

Query: 265 VHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGSTRPTYIR 324
           VHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVVAEYLVPNIR+IP +GS +PTYIR
Sbjct: 270 VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGSMKPTYIR 329

Query: 325 FLTGLKAYSQIFSRLAFGARRNRYFLED 353
           FLTG+KAY++IFSR+A GAR+NRY  E+
Sbjct: 330 FLTGIKAYTKIFSRVALGARKNRYVTEE 348

[Close]

BLAST of CSPI06G04160 vs. TAIR10
Match: AT4G13250.1 (AT4G13250.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-51
Identity = 115/283 (40.64%), Postives = 168/283 (59.36%), Query Frame = 1


Query: 82  PYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSL--------------- 141
           P NV+ITGST+G+G ALAR+FL  GD V++ SRS+E V+ +V+ L               
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESA 220

Query: 142 REEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDED 201
           R++  + +V G  CDV + EDV+ L  F  K L  ++IWINNAG+N   F+PL+E ++ED
Sbjct: 221 RKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNK-GFRPLLEFTEED 280

Query: 202 LIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 261
           + ++V+TN +G ++C R A+ +M  Q  GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 281 ITQIVSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 340

Query: 262 LTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLV 321
              S+  E       NV +H  SPGMV T+LL+SG+  K  + F N++ E PE VA  LV
Sbjct: 341 FHGSIVKE---SQKTNVGLHTASPGMVLTELLLSGSSIKNKQMF-NIICELPETVARTLV 400

Query: 322 PNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYF 350
           P +R +  +G      + +LT  +    + + +    RR R+F
Sbjct: 401 PRMRVVKGSGKA----VNYLTPPRI---LLAIVTSWLRRGRWF 431

[Close]

BLAST of CSPI06G04160 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-15
Identity = 61/202 (30.20%), Postives = 100/202 (49.50%), Query Frame = 1


Query: 79  MVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGT 138
           +V    VLITG +KG+G ALA +  K G  V+ C+RS E++ +    L        +   
Sbjct: 14  IVAARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSSTNHLLL--- 73

Query: 139 KCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGL 198
             DV+    V+ +   + +     DI +NNAG+   + K + E S ED   V+ TN  G+
Sbjct: 74  TADVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSK-IWEVSAEDFDNVMDTNVKGV 133

Query: 199 MICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQ 258
               R  I +ML + +G  +    G G  G      A Y A+K ++  L++++  E+   
Sbjct: 134 ANVLRHFIPLMLPRKQGIIVNMSSGWGRSG--AALVAPYCASKWAIEGLSRAVAKEV--- 193

Query: 259 DVKNVVVHNLSPGMVTTDLLMS 281
            V+ + V  L+PG++ T+LL S
Sbjct: 194 -VEGMAVVALNPGVINTELLTS 205

[Close]

BLAST of CSPI06G04160 vs. TAIR10
Match: AT5G10050.1 (AT5G10050.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14
Identity = 67/235 (28.51%), Postives = 113/235 (48.09%), Query Frame = 1


Query: 85  VLITGSTK-GIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCDVR 144
           VLITG ++ GIG+ALAR+F ++G  VV  SRS     S++  L +   + R++  + DV+
Sbjct: 10  VLITGCSQGGIGHALAREFTEKGCRVVATSRS----RSTMTDLEQ---DSRLFVKELDVQ 69

Query: 145 EGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMICCR 204
             ++V  +++ +      +D+ +NNAG       PL E     +     TN  G M   +
Sbjct: 70  SDQNVSKVLSEVIDKFGKIDVLVNNAGVQCVG--PLAETPISAMENTFNTNVFGSMRMTQ 129

Query: 205 EAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNV 264
             +  M+++ + G I N+ G+ +   P P    Y ATK ++  LT +L+ ELR   +   
Sbjct: 130 AVVPHMVSKKK-GKIVNV-GSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGID-- 189

Query: 265 VVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGST 319
            V N+ PG + T++  S   T      + +     E + E    + R  PT   T
Sbjct: 190 -VINVVPGGIRTNIANSAVATFNKMPELKLYKPYEEAIRERAFISQRMNPTPAET 230

[Close]

BLAST of CSPI06G04160 vs. TAIR10
Match: AT5G65205.1 (AT5G65205.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 7.4e-14
Identity = 68/240 (28.33%), Postives = 114/240 (47.50%), Query Frame = 1


Query: 85  VLITGSTKG-IGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQRVWGTKCDVR 144
           VLITG ++G IG+ALAR+F   G  VV  SRS        +++ E   + + +  + DV+
Sbjct: 11  VLITGCSQGGIGHALAREFSANGCRVVATSRSQ-------KTMTELEKDSKFFVQELDVQ 70

Query: 145 EGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVEASDEDLIEVVTTNALGLMICCR 204
             + V  +V+ +      +D+ +NNAG       PL E     +     TN LG M   +
Sbjct: 71  SEQSVSKVVSKVIDKFGQIDVLVNNAGVQCIG--PLAEIPISAMDYTFNTNVLGSMRMTQ 130

Query: 205 EAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNV 264
             +  M ++ + G I NI G+ S   P P    Y A+K ++  LT +L+ EL+   +   
Sbjct: 131 AVVPHMASKKK-GKIVNI-GSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGID-- 190

Query: 265 VVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAE--YLVPNIRSIPTNGSTRPT 322
            V N+ PG + +++  SG  +      + +     + + E  +L  NI+ IPT    + T
Sbjct: 191 -VINIVPGGIQSNIANSGISSFNNLPELKLYKPFEDAIRERAFLSQNIKPIPTETFAKET 236

[Close]

BLAST of CSPI06G04160 vs. NCBI nr
Match: gi|449446317|ref|XP_004140918.1| (PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Cucumis sativus])

HSP 1 Score: 693.7 bits (1789), Expect = 1.6e-196
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1


Query: 1   MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV 60
           MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV
Sbjct: 1   MASSTSSSSSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNSV 60

Query: 61  VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE 120
           VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE
Sbjct: 61  VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVE 120

Query: 121 SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV 180
           SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV
Sbjct: 121 SSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLV 180

Query: 181 EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT 240
           EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT
Sbjct: 181 EASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT 240

Query: 241 KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV 300
           KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV
Sbjct: 241 KRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEV 300

Query: 301 VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED
Sbjct: 301 VAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 352

[Close]

BLAST of CSPI06G04160 vs. NCBI nr
Match: gi|659113539|ref|XP_008456629.1| (PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 664.1 bits (1712), Expect = 1.4e-187
Identity = 339/353 (96.03%), Postives = 345/353 (97.73%), Query Frame = 1


Query: 1   MASSTSSS-SSLLFTSPFIAHNHGFFISPPSQSRLSLHKFRSFSLSIPPSRKISNIPTNS 60
           MASSTSSS SSLL TSPFI+HNHGFFISP SQ RLSL+KF+SF+LSIP SRKISNIP NS
Sbjct: 38  MASSTSSSSSSLLLTSPFISHNHGFFISPSSQIRLSLYKFKSFTLSIPRSRKISNIPANS 97

Query: 61  VVNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERV 120
           +VNSNSVS KPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERV
Sbjct: 98  LVNSNSVSPKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERV 157

Query: 121 ESSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPL 180
           ESSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKY+DIWINNAGSNAYSFKPL
Sbjct: 158 ESSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYIDIWINNAGSNAYSFKPL 217

Query: 181 VEASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGA 240
           VEASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGA
Sbjct: 218 VEASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGA 277

Query: 241 TKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPE 300
           TKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPE
Sbjct: 278 TKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPE 337

Query: 301 VVAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           VVAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRY LED
Sbjct: 338 VVAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYLLED 390

[Close]

BLAST of CSPI06G04160 vs. NCBI nr
Match: gi|743868219|ref|XP_011032940.1| (PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X2 [Populus euphratica])

HSP 1 Score: 516.9 bits (1330), Expect = 2.7e-143
Identity = 270/351 (76.92%), Postives = 288/351 (82.05%), Query Frame = 1


Query: 29  PSQSRLSLHKFRSFSLSIPPSRKISNI---------PTNSVVNSNS-------------- 88
           PS S L L K  SFS   PP    S++         PT S    NS              
Sbjct: 11  PSSSSLLL-KASSFSSQFPPLLSPSHLFLTVFSRQAPTKSTNARNSNYTNNTGIAYLNYP 70

Query: 89  ----VSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVES 148
                 T       +EPM+PP+NVLITGSTKGIGYALA++FLK GDNV+ICSRSAERVES
Sbjct: 71  VVVKAQTSSSSALSREPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVES 130

Query: 149 SVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVE 208
           +VQSLREEFGEQRVWGTKCDVREG+DVK+LVAF Q++LKY+DIWINNAGSNAYS+KPL E
Sbjct: 131 AVQSLREEFGEQRVWGTKCDVREGKDVKDLVAFAQESLKYIDIWINNAGSNAYSYKPLAE 190

Query: 209 ASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK 268
           ASDEDLIEVVTTN LGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK
Sbjct: 191 ASDEDLIEVVTTNTLGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK 250

Query: 269 RSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVV 328
           RSVVHLTKSLQAELRMQDV+NVVVHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVV
Sbjct: 251 RSVVHLTKSLQAELRMQDVQNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVV 310

Query: 329 AEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 353
           AEYLVPNIRSIP NGST+PTYIRFLTG+KAYSQIFSR AFGARRNRY LED
Sbjct: 311 AEYLVPNIRSIPANGSTKPTYIRFLTGVKAYSQIFSRFAFGARRNRYLLED 360

[Close]

BLAST of CSPI06G04160 vs. NCBI nr
Match: gi|695271609|ref|NP_001289228.1| (chlorophyll(ide) b reductase NOL, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 513.5 bits (1321), Expect = 3.0e-142
Identity = 251/301 (83.39%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 52  ISNIPTNSVVNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVI 111
           +S   +  V  S S S    + + +EPM+PPYNVLITGSTKGIGYALA++FLK GDNVVI
Sbjct: 53  LSTSDSRLVRASTSASDSGSDSESREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVVI 112

Query: 112 CSRSAERVESSVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGS 171
           CSRSAERV ++VQSLR++FGEQ VWGT CDVREG+DVK+LVAF QKNLKY+DIWINNAGS
Sbjct: 113 CSRSAERVNAAVQSLRQDFGEQHVWGTNCDVREGQDVKDLVAFAQKNLKYIDIWINNAGS 172

Query: 172 NAYSFKPLVEASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPT 231
           NAYS+KPL EASDEDLIEVVTTN LGLM+CCREAIKMM NQPRGGHIFNIDGAGSDGRPT
Sbjct: 173 NAYSYKPLAEASDEDLIEVVTTNTLGLMLCCREAIKMMFNQPRGGHIFNIDGAGSDGRPT 232

Query: 232 PRFAAYGATKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFI 291
           PRFAAYGATKRSVVHLTKSLQAEL+MQDVKNV VHNLSPGMVTTDLLMSGA TKQAKFFI
Sbjct: 233 PRFAAYGATKRSVVHLTKSLQAELQMQDVKNVAVHNLSPGMVTTDLLMSGATTKQAKFFI 292

Query: 292 NVLAEPPEVVAEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLE 351
           NVLAEPPEVVAEYLVPNIRS+P NGS +PTYIRFLTG+KAYSQIFSR AFGARRNRY LE
Sbjct: 293 NVLAEPPEVVAEYLVPNIRSVPANGSMKPTYIRFLTGIKAYSQIFSRFAFGARRNRYVLE 352

Query: 352 D 353
           D
Sbjct: 353 D 353

[Close]

BLAST of CSPI06G04160 vs. NCBI nr
Match: gi|743868215|ref|XP_011032939.1| (PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X1 [Populus euphratica])

HSP 1 Score: 512.3 bits (1318), Expect = 6.7e-142
Identity = 270/352 (76.70%), Postives = 288/352 (81.82%), Query Frame = 1


Query: 29  PSQSRLSLHKFRSFSLSIPPSRKISNI---------PTNSVVNSNS-------------- 88
           PS S L L K  SFS   PP    S++         PT S    NS              
Sbjct: 11  PSSSSLLL-KASSFSSQFPPLLSPSHLFLTVFSRQAPTKSTNARNSNYTNNTGIAYLNYP 70

Query: 89  ----VSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVES 148
                 T       +EPM+PP+NVLITGSTKGIGYALA++FLK GDNV+ICSRSAERVES
Sbjct: 71  VVVKAQTSSSSALSREPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVES 130

Query: 149 SVQSLREEFGEQRVWGTKCDVREGEDVKNLVAFLQKNLKYVDIWINNAGSNAYSFKPLVE 208
           +VQSLREEFGEQRVWGTKCDVREG+DVK+LVAF Q++LKY+DIWINNAGSNAYS+KPL E
Sbjct: 131 AVQSLREEFGEQRVWGTKCDVREGKDVKDLVAFAQESLKYIDIWINNAGSNAYSYKPLAE 190

Query: 209 ASDEDLIEVVTTNALGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK 268
           ASDEDLIEVVTTN LGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK
Sbjct: 191 ASDEDLIEVVTTNTLGLMICCREAIKMMLNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK 250

Query: 269 RSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVV 328
           RSVVHLTKSLQAELRMQDV+NVVVHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP EVV
Sbjct: 251 RSVVHLTKSLQAELRMQDVQNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVV 310

Query: 329 AEYLVPNIRSIPTNGSTRPTYIRFLTGLKAYSQIFS-RLAFGARRNRYFLED 353
           AEYLVPNIRSIP NGST+PTYIRFLTG+KAYSQIFS R AFGARRNRY LED
Sbjct: 311 AEYLVPNIRSIPANGSTKPTYIRFLTGVKAYSQIFSQRFAFGARRNRYLLED 361

The following BLAST results are available for this feature:

BLAST of CSPI06G04160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NOL_ARATH	2.1e-135	74.39	Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL P...	[more]
NOL_ORYSJ	7.0e-131	81.65	Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica ...	[more]
NYC1_ORYSJ	6.2e-55	44.06	Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp....	[more]
NYC1_ARATH	4.6e-50	40.64	Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thalian...	[more]
YDFG_SALTI	3.8e-20	32.74	NADP-dependent 3-hydroxy acid dehydrogenase YdfG OS=Salmonella typhi GN=ydfG PE=...	[more]

BLAST of CSPI06G04160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE83_CUCSA	1.1e-196	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046390 PE=3 SV=1	[more]
W8TP72_9ROSA	2.1e-142	83.39	Chlorophyll b reductase NOL protein OS=Pyrus x bretschneideri PE=2 SV=1	[more]
A0A067KTE6_JATCU	6.8e-141	78.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04165 PE=3 SV=1	[more]
B9HKL0_POPTR	6.8e-141	88.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s01480g PE=3 SV=2	[more]
M5X3D8_PRUPE	1.2e-140	89.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009825mg PE=3 SV=1	[more]

BLAST of CSPI06G04160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04900.1	1.2e-136	74.39	NYC1-like	[more]
AT4G13250.1	2.6e-51	40.64	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G10310.1	6.7e-15	30.20	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G10050.1	1.1e-14	28.51	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G65205.1	7.4e-14	28.33	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of CSPI06G04160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446317\|ref\|XP_004140918.1\|	1.6e-196	100.00	PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Cucumis sativus]	[more]
gi\|659113539\|ref\|XP_008456629.1\|	1.4e-187	96.03	PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X1 [Cucumis m...	[more]
gi\|743868219\|ref\|XP_011032940.1\|	2.7e-143	76.92	PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X2 [Populus e...	[more]
gi\|695271609\|ref\|NP_001289228.1\|	3.0e-142	83.39	chlorophyll(ide) b reductase NOL, chloroplastic [Pyrus x bretschneideri]	[more]
gi\|743868215\|ref\|XP_011032939.1\|	6.7e-142	76.70	PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X1 [Populus e...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom
IPR020904	Sc_DH/Rdtase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0034256	chlorophyll(ide) b reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G04160.1	CSPI06G04160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 216..224 score: 2.6E-6coord: 237..256 score: 2.6E-6coord: 160..171 score: 2.
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 84..101 score: 1.6E-19coord: 261..278 score: 1.6E-19coord: 237..256 score: 1.6E-19coord: 160..171 score: 1.6E-19coord: 210..226 score: 1.6
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 84..282 score: 4.0
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 84..302 score: 3.3
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 84..304 score: 1.81
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 224..252 scor
None	No IPR available	PANTHER	PTHR24314	FAMILY NOT NAMED	coord: 57..352 score: 1.7E
None	No IPR available	PANTHER	PTHR24314:SF6	CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC	coord: 57..352 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G04160	Cla013675	Watermelon (97103) v1	cpiwmB472
CSPI06G04160	Csa6G046390	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G04160	MELO3C019918	Melon (DHL92) v3.5.1	cpimeB473
CSPI06G04160	ClCG08G008480	Watermelon (Charleston Gray)	cpiwcgB523
CSPI06G04160	Lsi08G006270	Bottle gourd (USVL1VR-Ls)	cpilsiB487
CSPI06G04160	MELO3C019918.2	Melon (DHL92) v3.6.1	cpimedB465
CSPI06G04160	CsaV3_6G004470	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G04160	Cla97C08G151240	Watermelon (97103) v2	cpiwmbB514
CSPI06G04160	Bhi04G001300	Wax gourd	cpiwgoB593
CSPI06G04160	Cucsa.364450	Cucumber (Gy14) v1	cgycpiB540
CSPI06G04160	CmaCh15G005370	Cucurbita maxima (Rimu)	cmacpiB315
CSPI06G04160	CmoCh15G005450	Cucurbita moschata (Rifu)	cmocpiB306
CSPI06G04160	Cp4.1LG01g25160	Cucurbita pepo (Zucchini)	cpecpiB460
CSPI06G04160	Cp4.1LG13g10700	Cucurbita pepo (Zucchini)	cpecpiB198
CSPI06G04160	CsGy6G004130	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G04160	Carg01662	Silver-seed gourd	carcpiB0870

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G04160	Cucurbita moschata (Rifu)	cmocpiB769
CSPI06G04160	Silver-seed gourd	carcpiB0070
CSPI06G04160	Cucurbita maxima (Rimu)	cmacpiB778