CSPI05G01440 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G01440
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 2024698 .. 2027571 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACATCAGCAGGTGTTCTAAATGTAACATTTCAAGGTGGAAGACAAGTAAGAACTTGAAGAGATTAATGAAGTTATAGTCAAACAGTTGTGGTATTTTTCAATTGTTCCGAGGTTTTTAAGGATGTTCAAGAACTTCGAACATGCAAAGAACTCGTGTTGCCATGCAAATGACAGGAAAGTAGACAGTGTGTTGAGGCGTCCAACTGATACTCCATCTTGGAGGTTGGTAGACCATCTATGGCCAAATTTTAGGTTCAAACCGAGAAACCTCTACTTAGGGTTGTCCACAGATGGCACCAATCTATATGGAGATTTATAGACGAAATATAGTTGTTGGCTGGTGATTGCTACAATATACAACCTTCCACCGTGGGTATGTATGAGAGAAAAGTATTTGATGTTAACTATGTTAATCTCATGACCTAAGCAACCAGGATACAACATAAATGTCTACCTAGCACCTTTGATTGGTTATCTCAAACATACGTGGAAAGAAGGTGTTTAGTGTTTTGATGCACATAAAGAAGAATCATTCACCCCGTGAGTTGTTTACTGTGAACCATCAATGATTTTTCTACATACGACAACCTGTTTGGATGTAGCGTGAAGGGGTATAAGGCTTGTCCAATATGTGGGAAGGAGACTTTTTCTATAAGACTACCACATGGGAAGAAAAATGCATAAATGAGACATAGAAAATACCTACAAAGACATCACCCTTATAAGAGACAAAAGAAAGCATTTGATGGTAATCAGGAGCATGGGACACCTCCGTTCCCTTTATCAGGTGAGGTAATCTATAATACCCTTAAGGACAACGTCACACCCTAAACTGCAATAGGACCAAAACACTGAAGTAAAAGGAATATGATGTGATTTAGTTACAACCTTAAAATTCTCTTACCGACTAATTCAACCTCAACACCTTTTAAATACTAAGAGAAAACATAACGTCATAGAAGTCGTATCGAACGCCAAATACATTCAAAGAATCTTAATGCGAAAAACTTAACGCAATCAATTCAACCAAAACTTACACTTTATTAATAAGAGGTGTTTAATACAACAATGTAAAGAAACAACTCTTAACCAAAATTTACATTAAATAAACTCTTAAACGCCTAGTAACTTTCTCATCATGCCGCAAAACCTCCCTCTTCCTTCTCTACTTGGCTTAAATGTCTTATTCTAGAGGATTAATTTTGAAAACATCAGTCGAATGACTCAGTGGGGTTTTATGAAAACCTTTTGCAATATATTTTCATAATCATTTCACAAAAATAATATCAAATCATTTAAACATACTAACAAATCATTTCATTTCGCATAAACCTTTCTTAACAAATAATTTTCTTTCGCTAAGGATCCCAAATTATCCTCTATGCTTGGTCTTATTACCTCGCGTTTAGACTACTATATCAACAACATTTGAGAACATACAAATTTGTTCTTGTTACTCAGGACACTAAGCTTTATACGCTCCTTGCAACGTATAAGCCAACTTCTTATTATCATGTAGCCCGTACACCCCATGGTGGTCTTTATGTGTACATAAAAGTTAGCATCATCTTAAAGAAACAACTAATAGTTTGGAAATTATTTTATAGTATTGAAATCATAATCATCAAATCAATCTTTAACATTATAAATCATGCTTGAAAACATAACTTTTCATAGAAATCTCTTTGATACATACTCATTTGAATTCTTCTTTCAAATCAGTAAAGAGAAATCATAACAAAGTTTTTAACATAAATTCATTTGAGAGAAAAGCACTCACAAAACTTTACTAAAGAAGTTCTTCTTCTTCTCGCAAGCCCCTTCTCGCGTAGCTAAACCAACAACACTTCAACATTTCAACAAAACTCCCACCATCCCCTCAGTTATCCAAATCCTCTTATTTATAGAGCCCCTAAACTAACTTAGTAATGCATAAACTCTTCTCAGTTTGCTAGCTTCTACTTAAAACTTTACATGTGTAAATCAATATTCAACCTCGCCATGTTTAAGTCCTTAATCTTACACGTTAACCCCTGTCAAATCAGATTTGACATTTTTTTCGCCAGACCTTGCTTCTCGCCTAACCCAAACCACGAATAACTTCAACCACTTAACATTTCTCGCGAATAACCTTATCGTGTGGTTATATTTTTACTATAAAAAACCTTCCACGCGAACTAACCGACTTTTACTTGCATAGAACTCTTATCACGAACTTAAACTCCAAGAATTTCTCGCAGACTTCTTCTTCGTGAAACATTTGGTTCCTCTCTCGAAGACCACCCAAAACCCGTAGTGTAACACTTTTTAAAAACTTTCACTTCTTAACTTAAGGGAAGACTTTTTCTCTTCTTATCACACAACTTTTTTTGTGAACTACCCACTTAATCGAAAAAATGTATACTTAACCATAAAAGATTTTATCGCTTAATCCTTTTCGTAAATTTATTCAAACACCAAATTCTTAATACTTTTGTCGAATATTACTTCCTTACTCAAATTAGAAATGAGTCTCATAGACAACACCTTTCCATGTGGTAAAAGGTCCAGTAGGAGGTTAAATGAAGACATTTCAAATGTCTACTAGAAGAGGATTATATTTATGCATTCTTTGAGTTACCATACTGGAAAAAAATTACATGTAAGATAATGTCTTGATGTTATGCATATTGAGAAGAGTATGTTGATGAATATAATTGGTACACTACTCGACATGCCAGAGGAAGAGTAAGGATCGACGGAGTTCTAGACCCGATTTGGTAGAAATGAACATTCGACCTGAGTTGGCCCCTTTGTCTGATGGGAGTAGAACTTACATACCTGCAGCATGTTATACATTATCAAGAAGGTTATTCATCGAATTTTAG

mRNA sequence

ATGGCAGACATCAGCAGGTTTTTAAGGATGTTCAAGAACTTCGAACATGCAAAGAACTCGTGTTGCCATGCAAATGACAGGAAAGTAGACAGTGTGTTGAGGCGTCCAACTGATACTCCATCTTGGAGGTTGACGAAATATAGTTGTTGGCTGGTGATTGCTACAATATACAACCTTCCACCGTGGGAGCATGGGACACCTCCGTTCCCTTTATCAGGTGAGGACACTAAGCTTTATACGCTCCTTGCAACGTATAAGCCAACTTCTTATTATCATGTAGCCCGTACACCCCATGGTGGTCTTTATAGGAAGAGTAAGGATCGACGGAGTTCTAGACCCGATTTGGTAGAAATGAACATTCGACCTGAGTTGGCCCCTTTGTCTGATGGGAGTAGAACTTACATACCTGCAGCATGTTATACATTATCAAGAAGGTTATTCATCGAATTTTAG

Coding sequence (CDS)

ATGGCAGACATCAGCAGGTTTTTAAGGATGTTCAAGAACTTCGAACATGCAAAGAACTCGTGTTGCCATGCAAATGACAGGAAAGTAGACAGTGTGTTGAGGCGTCCAACTGATACTCCATCTTGGAGGTTGACGAAATATAGTTGTTGGCTGGTGATTGCTACAATATACAACCTTCCACCGTGGGAGCATGGGACACCTCCGTTCCCTTTATCAGGTGAGGACACTAAGCTTTATACGCTCCTTGCAACGTATAAGCCAACTTCTTATTATCATGTAGCCCGTACACCCCATGGTGGTCTTTATAGGAAGAGTAAGGATCGACGGAGTTCTAGACCCGATTTGGTAGAAATGAACATTCGACCTGAGTTGGCCCCTTTGTCTGATGGGAGTAGAACTTACATACCTGCAGCATGTTATACATTATCAAGAAGGTTATTCATCGAATTTTAG
Homology
[Close]
BLAST of CSPI05G01440 vs. TrEMBL
Match: A5B258_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021512 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-06
Identity = 30/90 (33.33%), Postives = 45/90 (50.00%), Query Frame = 1 

Query: 4   ISRFLRMFKNFEHAKNSCCHANDRKVDSVLRRPTDTPSWRL------------------- 63
           I RF R+F++ + AK+   HA +R+ D  +R P+D+PSW+L                   
Sbjct: 82  IPRFRRLFQSPKIAKDLIWHAQEREFDGKMRHPSDSPSWKLVDHRWPDFALEPRNLRLAI 141

[Close]
BLAST of CSPI05G01440 vs. TrEMBL
Match: L0P277_9POAL (PH01B031C15.18 protein OS=Phyllostachys edulis GN=PH01B031C15.18 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-06
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 1 

Query: 4   ISRFLRMFKNFEHAKNSCCHANDRKVDSVLRRPTDTPSWRLTKYSCWLV--------IAT 63
           I R  R F N ++AK    H+ +RK +  LR   D+  WR    + W          I  
Sbjct: 191 IPRLKRFFTNPKNAKLLYWHSEERKNNGKLRHSADSAQWR--NINRWFADFGAEPRNIRF 250

Query: 64  IYNLPPW-----------EHGTPPFPLSGEDTKLYTLLATY--------KPTSYYHVART 123
           +    P+           E  + P  LSG++  +Y ++           K  +  +V  +
Sbjct: 251 LRRAHPYRRMKKQFDGEKEDSSAPRHLSGKE--VYDMVKDLDVVLGKGCKSRTQKNVCDS 310

Query: 124 PHGGLYR---KSKDRRSSRPDLVEMNIRPELAPL-SDGSRTYIPAACYTLSR 145
             G L     K+KD   ++ DLV+M+IRPELAP  +D  RTY+P ACYTLS+
Sbjct: 311 SIGLLLNIRDKTKDGVIAQLDLVDMDIRPELAPTKTDKGRTYLPPACYTLSK 358

[Close]
BLAST of CSPI05G01440 vs. TrEMBL
Match: A0A0S3T7W7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G048300 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-06
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 

Query: 104 KSKDRRSSRPDLVEMNIRPELAPLSDGSRTYIPAACYTLSRRLFIEF 151
           K+KD  ++R DLV+MNIR ELAP   G RTY+P ACYT+SR+  I F
Sbjct: 21  KTKDGVNARLDLVDMNIREELAPKEIGKRTYLPPACYTMSRQEKISF 67

[Close]
BLAST of CSPI05G01440 vs. TrEMBL
Match: A5BQA4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021905 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-06
Identity = 44/191 (23.04%), Postives = 76/191 (39.79%), Query Frame = 1 

Query: 4   ISRFLRMFKNFEHAKNSCCHANDRKVDSVLRRPTDTPSWRL------------------- 63
           I RF  +F++ + AK+   HA +R+ D  +  P+D+PSW+L                   
Sbjct: 397 IPRFKXLFQSRKIAKDLIWHAQEREFDGKMHHPSDSPSWKLVDHRWPDFASEPRNLRLAI 456

Query: 64  ------------TKYSCWLVIATIYNLPPWEHGTPPFPLSGEDTKLYTLLATYKPTSYYH 123
                       +K+SCW +I     +   +       L+ + T  +   + +    Y+ 
Sbjct: 457 SADGINPHSSMSSKHSCWPIIMGKNKITRGK-------LNVKTTNCWKKKSIFFDLEYWK 516

Query: 124 VARTPHG-------------------GLYRKSKDRRSSRPDLVEMNIRPELAPLSDGSRT 145
                H                     +  K+ D  +SR DL+EM +R EL P+   +R 
Sbjct: 517 YLHVRHNLDVMHIEKNVCESIIGTLLNIPSKTNDGLNSRLDLMEMGLRCELGPMFKSNRX 576

[Close]
BLAST of CSPI05G01440 vs. NCBI nr
Match: gi|659129657|ref|XP_008464776.1| (PREDICTED: uncharacterized protein LOC103502584 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1 

Query: 104 KSKDRRSSRPDLVEMNIRPELAPLSDGSRTYIPAACYTLSR 145
           KSKD  S+R DLVEMNIRPELAP+SDGSRTYIPAACYTLSR
Sbjct: 203 KSKDGLSARLDLVEMNIRPELAPVSDGSRTYIPAACYTLSR 243

[Close]
BLAST of CSPI05G01440 vs. NCBI nr
Match: gi|659125772|ref|XP_008462854.1| (PREDICTED: uncharacterized protein LOC103501133 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-10
Identity = 41/84 (48.81%), Postives = 44/84 (52.38%), Query Frame = 1 

Query: 10 MFKNFEHAKNSCCHANDRKVDSVLRRPTDTP-----------------SWRL-------- 63
          MFKN E+AKN C HANDRKVD VLR P DTP                 + RL        
Sbjct: 1  MFKNSEYAKNLCWHANDRKVDGVLRHPADTPSWRLVDHLWPDFGFEPRNLRLGLSTDGIN 60

[Close]
BLAST of CSPI05G01440 vs. NCBI nr
Match: gi|659090010|ref|XP_008445784.1| (PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-10
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 1 

Query: 4   ISRFLRMFKNFEHAKNSCCHANDRKVDSVLRRPTDTPSWRLTKY 48
           +SRFLRMFKN E+AKN C HANDRKV+ VLR P DTPSWRL  +
Sbjct: 107 VSRFLRMFKNSEYAKNLCWHANDRKVNGVLRHPADTPSWRLVDH 150

[Close]
BLAST of CSPI05G01440 vs. NCBI nr
Match: gi|659072230|ref|XP_008464173.1| (PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 1 

Query: 104 KSKDRRSSRPDLVEMNIRPELAPLSDGSRTYIPAACYTLSR 145
           KSKD  S+R DLVE NIRPELAP+SDGSRTYIP ACYTLSR
Sbjct: 328 KSKDGLSARLDLVETNIRPELAPMSDGSRTYIPVACYTLSR 368

[Close]
BLAST of CSPI05G01440 vs. NCBI nr
Match: gi|659131091|ref|XP_008465505.1| (PREDICTED: uncharacterized protein LOC103503126 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09
Identity = 38/90 (42.22%), Postives = 43/90 (47.78%), Query Frame = 1 

Query: 4   ISRFLRMFKNFEHAKNSCCHANDRKVDSVLRRPTDTPSWRL------------------- 63
           I RF RMF N  H+KN   HAN+R VD  LR P D+PSW+L                   
Sbjct: 255 IPRFQRMFNNQIHSKNLTWHANERLVDGNLRHPADSPSWKLVDHLWSDFGSEERNFRLAL 314

The following BLAST results are available for this feature:
BLAST of CSPI05G01440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G01440 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B258_VITVI2.7e-0633.33Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021512 PE=4 SV=1[more]
L0P277_9POAL3.6e-0630.81PH01B031C15.18 protein OS=Phyllostachys edulis GN=PH01B031C15.18 PE=4 SV=1[more]
A0A0S3T7W7_PHAAN6.1e-0659.57Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G048300 PE=... [more]
A5BQA4_VITVI7.9e-0623.04Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021905 PE=4 SV=1[more]
BLAST of CSPI05G01440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G01440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129657|ref|XP_008464776.1|1.2e-1087.80PREDICTED: uncharacterized protein LOC103502584 [Cucumis melo][more]
gi|659125772|ref|XP_008462854.1|4.5e-1048.81PREDICTED: uncharacterized protein LOC103501133 [Cucumis melo][more]
gi|659090010|ref|XP_008445784.1|5.8e-1072.73PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo][more]
gi|659072230|ref|XP_008464173.1|1.3e-0982.93PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo][more]
gi|659131091|ref|XP_008465505.1|2.9e-0942.22PREDICTED: uncharacterized protein LOC103503126 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G01440.1CSPI05G01440.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 100..144
score: 5.2E-17coord: 6..74
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G01440Cucumber (Chinese Long) v3cpicucB286
CSPI05G01440Watermelon (97103) v2cpiwmbB383
CSPI05G01440Watermelon (97103) v2cpiwmbB418
CSPI05G01440Wax gourdcpiwgoB512
CSPI05G01440Cucumber (Gy14) v1cgycpiB398
CSPI05G01440Cucurbita maxima (Rimu)cmacpiB752
CSPI05G01440Cucurbita maxima (Rimu)cmacpiB767
CSPI05G01440Cucurbita moschata (Rifu)cmocpiB744
CSPI05G01440Cucurbita moschata (Rifu)cmocpiB754
CSPI05G01440Cucumber (Chinese Long) v2cpicuB240
CSPI05G01440Melon (DHL92) v3.5.1cpimeB377
CSPI05G01440Watermelon (Charleston Gray)cpiwcgB425
CSPI05G01440Cucurbita pepo (Zucchini)cpecpiB434
CSPI05G01440Bottle gourd (USVL1VR-Ls)cpilsiB340
CSPI05G01440Bottle gourd (USVL1VR-Ls)cpilsiB374
CSPI05G01440Melon (DHL92) v3.6.1cpimedB368
CSPI05G01440Melon (DHL92) v3.6.1cpimedB369
CSPI05G01440Cucumber (Gy14) v2cgybcpiB227
CSPI05G01440Silver-seed gourdcarcpiB0206