CSPI04G19550 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G19550
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	LINE-1 reverse transcriptase like
Location	Chr4 : 17322131 .. 17323144 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGGTGGGAGGATTACACTATGAAAATCAGTTTTGTCCAGCCTCCCTACATAGTATATGTCTGTTTTCCTCATGCCAGAATCTGCTCTAAGGAAAGAATCATGAGAAAGTTTTTTTTGAGAAGGAAACAAGGGAGGAAGGCTAAACCACCTAGTAAAATGGGATGTTGTAATTAAATCCTACAGAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATACGGCCCTATTGTCTAAGTGGGGTTAGCGTTTCTCAAAAGAACAAAACTCCCTTTGGTGTCAAGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

mRNA sequence

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Coding sequence (CDS)

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Homology

[Close]

BLAST of CSPI04G19550 vs. TrEMBL
Match: A5BSZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024106 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34
Identity = 89/265 (33.58%), Postives = 137/265 (51.70%), Query Frame = 1


Query: 1    MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
            M E F VG++R  +  LQFADD + F    EE ++ LK  LLVF   SG K+N  KS+I 
Sbjct: 1270 MLEGFRVGRNRTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIY 1329

Query: 61   GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIH-----GKLD- 120
            G+N++ + +   A +L+CK    P +YLGLPLG  PK+  FW P++++I      G L  
Sbjct: 1330 GINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISKPKTIGGLGL 1389

Query: 121  ---KWRRYNL----------------SRVIRSIHESSTFNWHSNGKETVSLRSPWISISR 180
                WR   L                 +VI SI+ S +  W +N     S R  W +I++
Sbjct: 1390 GNISWRNLALLGKWLWRYPREGSXLWHQVILSIYGSHSNGWDANTVVRWSXRCXWKAIAQ 1449

Query: 181  QWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTN- 240
             +++   +  + +G+G RI FW+  W     L  ++PRL R+ ++ N S+      S   
Sbjct: 1450 VFQEFSLITRYVVGNGDRIRFWEDLWRXDQPLGTQYPRLFRVVVDKNISISSVLGPSRPF 1509

[Close]

BLAST of CSPI04G19550 vs. TrEMBL
Match: A5C3T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000598 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 83/247 (33.60%), Postives = 130/247 (52.63%), Query Frame = 1


Query: 1    MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
            + E F VG++R  +  LQFADD +LF    E+ ++ LK  LLVF   SG K+N +KS + 
Sbjct: 2189 LLEGFRVGRNRCRVSHLQFADDTILFASPREDEVQTLKSLLLVFGQISGLKVNLDKSNLF 2248

Query: 61   GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
            G+N++ + +   A++L+CK    P +YLGLPLG  P +  FW P++++I  +LD W++  
Sbjct: 2249 GINLDQNHLSRLASLLDCKASDWPILYLGLPLGGNPTACGFWDPVIERISRRLDGWQKAY 2308

Query: 121  LS-----RVIRSI--HESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSR 180
            LS      ++ S   H  S F        +V+ +   +     W  +        GDG R
Sbjct: 2309 LSFGGRITLLHSCLSHIPSYFLSLFKIPASVAAKIERLQRDFLWSGVGE------GDGER 2368

Query: 181  ILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTN-SWSIYFRRLLNDEEILDF 240
            I FW+  W     L+ ++PRL R+ ++ N  +     SS   SW+  FRR L D EI D 
Sbjct: 2369 IRFWEDLWWGDQILKDQYPRLFRVVMDKNIPISSILGSSRPFSWNFNFRRNLTDSEIEDL 2428

[Close]

BLAST of CSPI04G19550 vs. TrEMBL
Match: A5AI05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010721 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 85/251 (33.86%), Postives = 126/251 (50.20%), Query Frame = 1


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE M  LK  LLVF   SG K+N +KS I 
Sbjct: 567 VLEGFRVGRNRTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIY 626

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK+  FW P++++I  +LD W +  
Sbjct: 627 GINLEQNHLSRLAEMLDCKXXGWPILYLGLPLGGNPKACGFWDPVIERISRRLDXWXKAY 686

Query: 121 LS-----RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQW-------RKIDSLALFKL 180
           LS      +I+S        + S  K   S+ +    + R +        K D L  +  
Sbjct: 687 LSFGDRITLIQSCLTHMPCYFLSLFKIXASVAAKIERMQRDFLWSGVGEDKRDHLVNWVN 746

Query: 181 GDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLN 237
           GD  RI  W   W     L  ++PRL  +  + N    S+L +  +   SW+  F R L+
Sbjct: 747 GD--RIRLWDDLWWGEQPLGVQYPRLLSVVTDKNAPISSILGY--TRPFSWNFSFHRNLS 806

[Close]

BLAST of CSPI04G19550 vs. TrEMBL
Match: A5AWB2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029053 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25
Identity = 86/292 (29.45%), Postives = 128/292 (43.84%), Query Frame = 1


Query: 5   FVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNI 64
           F VG++R+ +  LQF DD + F    EE +  LK  LLVF   SG K+N +KS I G+N+
Sbjct: 711 FRVGRNRIRVSXLQFXDDTIFFSSTREEDLLTLKSVLLVFGHISGLKVNLDKSNIYGINL 770

Query: 65  EDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLS-- 124
             + +   A +L+CK    P +YLGLPLG  PKS  FW P++++I  +LD W++  LS  
Sbjct: 771 GQNHLHRLAELLDCKASGWPILYLGLPLGGNPKSGGFWDPMIERISSRLDGWQKAYLSFG 830

Query: 125 -----------------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISI 184
                                        ++ R   E S   WH        + S + S 
Sbjct: 831 GRIILIQSCLTHMPCYFLSLFKIPASMAAKIERYPREGSA--WHQ------VILSIYGSH 890

Query: 185 SRQW---------------------RKIDSLALFKLGDGSRILFWKHPWVDIITLEC--- 240
           S  W                     +       F +GDG RI FW+  W      +    
Sbjct: 891 SNGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGERIRFWEDLW----WGDQPLG 950

[Close]

BLAST of CSPI04G19550 vs. TrEMBL
Match: A5C4A5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008516 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 74/241 (30.71%), Postives = 115/241 (47.72%), Query Frame = 1


Query: 19   FADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNC 78
            F DD +LF    EE +  LK  LLVF   SG K+N +KS + G+N++ + +   A +L+C
Sbjct: 1265 FQDDTILFANPREEELHTLKSLLLVFGQISGLKVNLDKSNLFGINLDQNHLSRLALMLDC 1324

Query: 79   KVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSRVIRSIHESSTFNWHS 138
            K    P +YLGLPLG  P +  FW PI   +  K+++ +R  L   +         +W +
Sbjct: 1325 KASDWPILYLGLPLGRNPTACGFWDPIPTSVAAKVERMQRDFLWSGVGEGKRDHLVSWDA 1384

Query: 139  NGKETVS---------LRS----PWI------SISRQWRKIDSLALFKLGDGSRILFWKH 198
              K  V          LR+     W       +I++ +        F +GDG RI FW+ 
Sbjct: 1385 VCKPRVKGGLGIGKIPLRNLYGIRWSHRCPWKAIAQGFHDFSKYTRFIVGDGERIRFWED 1444

Query: 199  PWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTN-SWSIYFRRLLNDEEILDFQALLSQ 240
             W      + ++PRL R+ ++ N  +     SS   SW+  FRR L D +I D + L+  
Sbjct: 1445 LWWGDQIFKDQYPRLYRVVMDKNSHISSILGSSRPFSWNFNFRRNLTDSKIEDLECLMHS 1504

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: gi|147859788|emb|CAN83561.1| (hypothetical protein VITISV_024106 [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 89/265 (33.58%), Postives = 137/265 (51.70%), Query Frame = 1


Query: 1    MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
            M E F VG++R  +  LQFADD + F    EE ++ LK  LLVF   SG K+N  KS+I 
Sbjct: 1270 MLEGFRVGRNRTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIY 1329

Query: 61   GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIH-----GKLD- 120
            G+N++ + +   A +L+CK    P +YLGLPLG  PK+  FW P++++I      G L  
Sbjct: 1330 GINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISKPKTIGGLGL 1389

Query: 121  ---KWRRYNL----------------SRVIRSIHESSTFNWHSNGKETVSLRSPWISISR 180
                WR   L                 +VI SI+ S +  W +N     S R  W +I++
Sbjct: 1390 GNISWRNLALLGKWLWRYPREGSXLWHQVILSIYGSHSNGWDANTVVRWSXRCXWKAIAQ 1449

Query: 181  QWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTN- 240
             +++   +  + +G+G RI FW+  W     L  ++PRL R+ ++ N S+      S   
Sbjct: 1450 VFQEFSLITRYVVGNGDRIRFWEDLWRXDQPLGTQYPRLFRVVVDKNISISSVLGPSRPF 1509

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: gi|147823103|emb|CAN66330.1| (hypothetical protein VITISV_000598 [Vitis vinifera])

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 83/247 (33.60%), Postives = 130/247 (52.63%), Query Frame = 1


Query: 1    MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
            + E F VG++R  +  LQFADD +LF    E+ ++ LK  LLVF   SG K+N +KS + 
Sbjct: 2189 LLEGFRVGRNRCRVSHLQFADDTILFASPREDEVQTLKSLLLVFGQISGLKVNLDKSNLF 2248

Query: 61   GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
            G+N++ + +   A++L+CK    P +YLGLPLG  P +  FW P++++I  +LD W++  
Sbjct: 2249 GINLDQNHLSRLASLLDCKASDWPILYLGLPLGGNPTACGFWDPVIERISRRLDGWQKAY 2308

Query: 121  LS-----RVIRSI--HESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSR 180
            LS      ++ S   H  S F        +V+ +   +     W  +        GDG R
Sbjct: 2309 LSFGGRITLLHSCLSHIPSYFLSLFKIPASVAAKIERLQRDFLWSGVGE------GDGER 2368

Query: 181  ILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTN-SWSIYFRRLLNDEEILDF 240
            I FW+  W     L+ ++PRL R+ ++ N  +     SS   SW+  FRR L D EI D 
Sbjct: 2369 IRFWEDLWWGDQILKDQYPRLFRVVMDKNIPISSILGSSRPFSWNFNFRRNLTDSEIEDL 2428

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: gi|147845854|emb|CAN80093.1| (hypothetical protein VITISV_010721 [Vitis vinifera])

HSP 1 Score: 130.6 bits (327), Expect = 3.8e-27
Identity = 85/251 (33.86%), Postives = 126/251 (50.20%), Query Frame = 1


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE M  LK  LLVF   SG K+N +KS I 
Sbjct: 567 VLEGFRVGRNRTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIY 626

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK+  FW P++++I  +LD W +  
Sbjct: 627 GINLEQNHLSRLAEMLDCKXXGWPILYLGLPLGGNPKACGFWDPVIERISRRLDXWXKAY 686

Query: 121 LS-----RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQW-------RKIDSLALFKL 180
           LS      +I+S        + S  K   S+ +    + R +        K D L  +  
Sbjct: 687 LSFGDRITLIQSCLTHMPCYFLSLFKIXASVAAKIERMQRDFLWSGVGEDKRDHLVNWVN 746

Query: 181 GDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLN 237
           GD  RI  W   W     L  ++PRL  +  + N    S+L +  +   SW+  F R L+
Sbjct: 747 GD--RIRLWDDLWWGEQPLGVQYPRLLSVVTDKNAPISSILGY--TRPFSWNFSFHRNLS 806

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: gi|1021498032|ref|XP_016192158.1| (PREDICTED: uncharacterized protein LOC107633037 [Arachis ipaensis])

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 75/234 (32.05%), Postives = 116/234 (49.57%), Query Frame = 1


Query: 6   VVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIE 65
           +VGKD + +  LQFADD +LFC  +EE + N  + L  FE  SG  I+++KS++  +N E
Sbjct: 73  LVGKDNIELSHLQFADDTILFCPPEEETIRNYARLLRCFEVMSGLTISFDKSSLIPINCE 132

Query: 66  DSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSRVI 125
                   N+L CK   LP  +LG+PLG+ P+    W+PI+DK+  KL  W+   L++  
Sbjct: 133 QQWTYDMCNLLGCKEACLPIKFLGIPLGANPRLVRTWKPIIDKVEEKLSLWKAKVLNKAA 192

Query: 126 RSIHESSTFNWHSNGKETVSLRSPWISISR-QWR------KIDSLALFKLGDGSRILFWK 185
           + +                    PW  I + Q+R      K+ +    ++GD  R  FW+
Sbjct: 193 QKLPTRG---------------GPWKDICQLQFRNDAVKDKMIAGLSMEVGDRRRTRFWE 252

Query: 186 HPWVDIITLECKFPRLGRIALNPNGSVL---DHWDSSTNSWSIYFRRLLNDEEI 230
             W+    L+  FPRL  ++ N  GSV+     WD     W+  +RR L   E+
Sbjct: 253 DLWLQSGPLKMSFPRLFSVS-NQKGSVIGDCGFWDGLEWIWNFQWRRDLYQWEL 290

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: gi|147781364|emb|CAN67224.1| (hypothetical protein VITISV_029053 [Vitis vinifera])

HSP 1 Score: 123.6 bits (309), Expect = 4.6e-25
Identity = 86/292 (29.45%), Postives = 128/292 (43.84%), Query Frame = 1


Query: 5   FVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNI 64
           F VG++R+ +  LQF DD + F    EE +  LK  LLVF   SG K+N +KS I G+N+
Sbjct: 711 FRVGRNRIRVSXLQFXDDTIFFSSTREEDLLTLKSVLLVFGHISGLKVNLDKSNIYGINL 770

Query: 65  EDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLS-- 124
             + +   A +L+CK    P +YLGLPLG  PKS  FW P++++I  +LD W++  LS  
Sbjct: 771 GQNHLHRLAELLDCKASGWPILYLGLPLGGNPKSGGFWDPMIERISSRLDGWQKAYLSFG 830

Query: 125 -----------------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISI 184
                                        ++ R   E S   WH        + S + S 
Sbjct: 831 GRIILIQSCLTHMPCYFLSLFKIPASMAAKIERYPREGSA--WHQ------VILSIYGSH 890

Query: 185 SRQW---------------------RKIDSLALFKLGDGSRILFWKHPWVDIITLEC--- 240
           S  W                     +       F +GDG RI FW+  W      +    
Sbjct: 891 SNGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGERIRFWEDLW----WGDQPLG 950

The following BLAST results are available for this feature:

BLAST of CSPI04G19550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G19550 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BSZ6_VITVI	1.0e-34	33.58	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024106 PE=4 SV=1	[more]
A5C3T9_VITVI	1.0e-31	33.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000598 PE=4 SV=1	[more]
A5AI05_VITVI	2.6e-27	33.86	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010721 PE=4 SV=1	[more]
A5AWB2_VITVI	3.2e-25	29.45	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029053 PE=4 SV=1	[more]
A5C4A5_VITVI	1.2e-24	30.71	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008516 PE=4 SV=1	[more]

BLAST of CSPI04G19550 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI04G19550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147859788\|emb\|CAN83561.1\|	1.4e-34	33.58	hypothetical protein VITISV_024106 [Vitis vinifera]	[more]
gi\|147823103\|emb\|CAN66330.1\|	1.5e-31	33.60	hypothetical protein VITISV_000598 [Vitis vinifera]	[more]
gi\|147845854\|emb\|CAN80093.1\|	3.8e-27	33.86	hypothetical protein VITISV_010721 [Vitis vinifera]	[more]
gi\|1021498032\|ref\|XP_016192158.1\|	1.9e-26	32.05	PREDICTED: uncharacterized protein LOC107633037 [Arachis ipaensis]	[more]
gi\|147781364\|emb\|CAN67224.1\|	4.6e-25	29.45	hypothetical protein VITISV_029053 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19550.1	CSPI04G19550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 1..92 score: 8
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 15..125 score: 1.0
None	No IPR available	PANTHER	PTHR19446:SF370	SUBFAMILY NOT NAMED	coord: 15..125 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G19550	Melon (DHL92) v3.6.1	cpimedB316
CSPI04G19550	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G19550	Silver-seed gourd	carcpiB0513
CSPI04G19550	Silver-seed gourd	carcpiB0552
CSPI04G19550	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G19550	Watermelon (97103) v2	cpiwmbB312
CSPI04G19550	Wax gourd	cpiwgoB403
CSPI04G19550	Cucumber (Gy14) v1	cgycpiB267
CSPI04G19550	Cucurbita maxima (Rimu)	cmacpiB673
CSPI04G19550	Cucurbita maxima (Rimu)	cmacpiB886
CSPI04G19550	Cucurbita moschata (Rifu)	cmocpiB673
CSPI04G19550	Cucurbita moschata (Rifu)	cmocpiB867
CSPI04G19550	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G19550	Melon (DHL92) v3.5.1	cpimeB325
CSPI04G19550	Watermelon (Charleston Gray)	cpiwcgB322
CSPI04G19550	Cucurbita pepo (Zucchini)	cpecpiB067
CSPI04G19550	Cucurbita pepo (Zucchini)	cpecpiB492
CSPI04G19550	Bottle gourd (USVL1VR-Ls)	cpilsiB249