CSPI04G03160 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G03160
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	30S ribosomal protein S1
Location	Chr4 : 1945933 .. 1951992 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATGCGTCACGCAAATAAGCGATGTGTTCCCATTCGGATTTGCAGCAGTTGGTGGCTTTCCATATCCGAATCCTTTCCCATTGCGCTCCTCCCCGCCATTTTCTTCCCTTCTCTCCACTCCCACAATCATGCCAATCTTTGTTGCAACCATCGCCTCTGTCTCTGCTCATTCCTTTCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAACCCCCCTCTAAACGCTCTTCCATTTTCCCCTCCAGAGTCTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTAGACACCTCCCCGGAATCCGTTCGACGTGCTCGGGTGAGTCACGTTCTTCTTCCCTTCTATCTATGTTGTTAACAACAGACTGGTCTGTTGTTAATTAGTTTTGAGATGCATGTTATCTAATATACCATACCAGCGTAAACGGGTATTTGATCTAATAAAAAAGAAATTGTTATCTACCAAAAGAGTCGCCATATCAGGGGCAAGTTAAGAAGTACACATTGGAAAAATCAAGGAAAATCTTGTCTGTTGTTGCCAATTGGTTTTTGATATGGAACCAACTTGTTATTAAAAATTCTCAGGTTTATGCGTCATAGATTTTAATGGACATTTTACTGTTGGACAAGTATAGGGTGGTGGGAGCGAGGAGGAATTGACATATCTTAGTTACAATTACAACTAAGTGAGAACTAGCACAATGCTTTTAGAGGAAATTGTAAAGCACCATCATGCTGTGTTATTATGGAAGGCTAGATAGAAGCTCATCAGCTTATAAAAATTGGCTTCTTATCTCAAAAAATGGTGTACCTAACCTGAGGAGAATAGCTCTACATAAGGGATTTGAGTGATACAATTCATTTTATGAAAAATAATATAACAAACCTAAGATGTGTGACAAAATAATATATGCAAGAAATTACTAATATACTTACTTTGCTATTACAAACACAAGGAAATATTAAAGGAATGGTAGGATAAGAGAAGTGCTGCATTCCATAAATCATTGAAGTTTGTTCTTCGTAGATTGAGTTGCCAAGATCCAGCAGTGATCGAAAATGCAGCATTATAGTTAAAAAACTTTTGTAGTGATATTGGGCATGTTTAATTAGGGACTTGCTAGAACGAATTGAGCATTTCCCATGAAAAGTTTATGCTTAGCCTGAGTTTCTATTACTTTCGTATAACTCTTGTAATCTAATACTTGGTTTCTGCAAAGAAGTAGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTGCGATTTTATTCTCTTGTTGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGGTACAAGTTTTCTTAATGCTATACTTTAAATTTTGTCATAAAGTTTCCTTGACAACATATCTCATATTTTACTTTTATCTATAGTAGGTCCTGAATTAAGATCAGTCTAAAAATTATGCTTCCCTTTTTACGTGGTCATTTCTTGGGTTAAATTCTATGGAGAGGAAGTCAGCAGTTTACCTAATGATGACTTAAATTTCTTGAGCTAGATGTGTTTCAAACTTTTAACATGCTTCCTCCCTGCGCTTGCCTTCTGAATTTCTTGCAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATATCAGTAAAGGTAGTTAGCTTCTATGGTTGTTCGTAACTAATCATTTATAGTTCTGAAAACTTCTCTTTAGTTAGCTGAAGACTGGTATACCTCTATATACTTGGTCACTCCCTAGGTTTACTGCTGAAAGAAAATAGGAGACTTGGATATTTGTTTCTTTAATTTCTTGATTTGTTGGATACACCTAAAATACGAAGTTGAATTATAGATGGTTTGATAATGTACACACTCAGTCACATCCCAAACACCAACTTTTGTCTTGGAGGAAGTAAAGTTCTCTACAACCATGAATCTCTTTCGAGGCTTGCTATATATATTGTTTTTCTTTTCTATCTTTCTTTCTTTCTGTCCTTTTTTTTTTCAAAAAAAAAGATTATAAGAAACGATCATTGTATTGAACCAAAAGCAAGACAACCTAGGGGTTGGAGAAAGAGGAAACCCTGAACAACAAACTTACAAAAGTGCAGTGCCCACTGTCATTGTCATTATCACAAATAATCATGGAGCAGATGAAGTCACAAAATAGTTTTTATGGTTTTTACACCAGCAAGAGGTTGTCCATTGTACACTATTACATCCGCCGAGGATGATTTCCTTAAACAATTCTCTGATTTTCTCTTTCCAAATAAACTAAGGAGTATCAATTGATGAGATGAGGAATAAATTTTTTTTTATAAAAAAACTAAAGAGTAGGTCCGACAGTTCAATTCCATAAGATTCTAGCTTTTCCTTTGAAAAAACTCAAGACATTAAATACTTTCATTTAGCCATACATCCACCCAAACTGGGAGGGAGATAACAAGTTCAAATGGAGAAAATAAAGCTCCACACTTTCTAACCAAAATATAGCAGCAGAGGAAAAATGGTCCACTGATTTCTTATCACTAAGACTCCATTGAGGAAACTTTCTCTAAATTCCGTTTTTCGTGTTTGGGCTGCTGTTTAACAAAGACCAAGTGAAGACCTTTACTTTCTTGGGCACTTCAAAGTTGGAAACTTTGTCCACTTCTGGAACACTGATCGTCGGCCTTGGTTTAGTGAGATGGACTAAGGCTGATTTAACAGAGAGCCCTGGACATATCAAGCTTCCACTGACATGACGCCATCAAAGCCCCTCTCAAATTGCACGGACTCAAGTTCACTGCCCATCTTGATAATTCCTTGTCAAACAGTTCTCTACAAATACCTTAGTTCCACGTCTGCTTTGAGCCTTGAGGCAACCCAGCAATTAGCAATAGAAGCCCCCTCTTTAGACCAGAGGCCATAGAAGTCAGTAAAAACAGAGGATAAAGAGATTTTGCCCACCCAAAGAGTCTTCCTAAAAGCATATGTGATGCCTGTTGGCCACCTCAACTGAACAAAATCCTGTAACCACTTTAGAAAATGATCACTCTCCCCAACTGTCTCATTGAAATTTTTAGAGTCCATACTGTCTTCATTGCTTCCTCTGTATCTGTCAAATGTTTTTCTGAAATTCCCCAATCATTACTCGAAATATGAATCAACATCTCCTACTAACAGCTGCAGGAACAGTAATATATTTCTTTGAGCCATCATGGAATGATGAAGTGATTTCTTCAAATCAACCACTTATTTTAATTTATTTTTTTTTCGGTACCAAGAGACTCCCATCTTAAACAGATATTCTTGAGGAATGTTTCTATCAAGAGGTTTTGAAGCATCTCAACAATTAATTGTTTGGAATTGCTTCCACAGCAGTCAATGTAAATGTAGGATATTTCCACGTTTCCTCCAACTTGATTAATGGCTGTCTAAATTATTACCATTGAAGCTAGTTTAATGGTTCTTTATTTTCTGTTGGAGTGACCATGATTAAACTTCAATTTCACTAAACCATAGAAAATCGAAAAGGTTAATCGAGAGAAAATATCTCATTCTGCATAGTGTGCTCTTTGGAAATTGAACTACTGGATGACATACCCTTGCTTATTAGGTTAAGAACCTGTTGTATACAAATTCAGCTGATCCATTTAGGTCCAAAATAAATTTTATCATCATCATGGTCAGTGAAGAAAGTAAAACACATGGATCATGTGGAGGGCAGTGCCATATTTCTTTTATTCATAAAGTGAAACGGAGAAGTTGTAATACAATGGTTTATGATGGAAATTAGGGAAAAATTAGGAGTCTCTTCCATGTGGGTGAGCTAGTTCTTTCATCATTCATATTAACATTTAACCATCTTTGGTTTTGAAATATTTAAGTAAGAATATGTTAAACCCTGCCATTTCTTATTTTCTAGGTAATCCAAGCAGATGAGAAAAACAGGAAATTGATATTTTCAGAGAAGGAAGCTGCGCGGTCAAAGTTTTCTGGGCAAGTGGCTGTGGGGGATGTTTATGAAGGCAAAGTTGGATCTGTGGAGGATTATGGTGCTTTTGTACATCTACGTCTCTCTGATGGTAATATTTTATGTTCTATTAATCTTCTTCCCTGACGCTGATGTATTTAGAAATCAATTACCACTTATTTTCCCAAATTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAGGTCATTAATGTTAACAAGCAAGTGTTCTCAGATTCCTTCTTGTTACCGACTAATTTGCTATTTGCACTTTCTAGGAAAAACCTGTTATTTGTAGTATTTTCAATTATTATGTGGTAGATTTACCTCTTTTTTCTATTATTTACTTATTTTGCTTGGGCTTCATGAAATTTGTTAGGTCCAGGGTTTTGGTTATGTTAGATAGGGGAAGTCGATTAGGAAGTAGGTGGAATTGTAGAAAGTGGGAAATTAGAGTCACAAGGATAGCTGAAGATTCTCTTAAATCGCTGCCCCATTTGTTAACAATTATTACTATTATTATGATTATTTTACCAACAATCCCCACTCCATATTAAGAATCAGAGTGCTTCTGAATCTCAATTCTCAATGAAATACAATCGGTTTTACTCTGATTATGCAATTTCTGAATTTAGAAATAGGAGACATTTGAATTGTAATTTTCGCACAAGGTTAGGAAATGGAAAACAAGGAAAATGAGATAGACTTGCTAAATTTATATCATCTCAAACTTTTAGTCCACGACCATTGGCATGCTGAATCTGTCTTATTGGTTTCATGCAGGAATAAGTCTCGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGTTTGTAAAACATTATTGTATGCATTTAGTCAACCTTTTCAACTACTCTCATCTCCTAACTGAGCTTTAGCTATATGATGAACATCATAATTAACAGGACAGTTCTGCTGAACCTGATTCTTTTGGACCTAAAGGCGACAGCGAAATAATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGAGGGGTATGTTACTATTTTTAGTTTGACATATTGAGGGTCATTTCTGAAAAGCTTTGAAAGTATCACGTGCAGTCTTTAAAGATTACTGATAACAACAATGTATCAGCATCAACAGTACGCATAAATATGCTGTGGCTTGTTCTGAGTACTTGAGGTTTAACTTTTATGCTCTTTGTTATGTCTAAATCAAAAGCTAAGATTCTAGTGATATTTGGGCATGTGCAATTTTATGGACATACCAAATTTCCTTAAGCATGGACGAAGTAATTTCACACATACAAAACGAGGAGATATGACAACCAACTAAAAAGAGCTTTTTAACTTTCTCGCTTACTTTCTCTCCATCGATTACACTTTTTGGGGTTTTAGTCATCGGTGGAGATCATATTATGTGTTTGTGGCATCTCAAGATATCTTGACCCTGAGTCACAATATGATCTTAATTTGGCTAGTTTGAATATCAGTATAGTAGATGTTCGTGTCAATCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGTAAGTTGGTTTTATTCCTATGAATATGATGTGGGGTTTCATCATTGGCTTCACTTTTTCTACTCTCATCTCATTGTTACTGTAGGCACCTCCCGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTAATCATCTCTCCTCACACACACACACACACAAACACATGCAACAGATACTAATCCATCATGTGTGTGAATTTAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGGGCATTGCAGCGTGTGTTGGAACGTGTCCCGTGA

mRNA sequence

ATGCCAATCTTTGTTGCAACCATCGCCTCTGTCTCTGCTCATTCCTTTCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAACCCCCCTCTAAACGCTCTTCCATTTTCCCCTCCAGAGTCTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTAGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTGCGATTTTATTCTCTTGTTGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAAAAACAGGAAATTGATATTTTCAGAGAAGGAAGCTGCGCGGTCAAAGTTTTCTGGGCAAGTGGCTGTGGGGGATGTTTATGAAGGCAAAGTTGGATCTGTGGAGGATTATGGTGCTTTTGTACATCTACGTCTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAGGTCATTAATGTTAACAAGAATAAGTCTCGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACCTGATTCTTTTGGACCTAAAGGCGACAGCGAAATAATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAATCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGCACCTCCCGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGGGCATTGCAGCGTGTGTTGGAACGTGTCCCGTGA

Coding sequence (CDS)

ATGCCAATCTTTGTTGCAACCATCGCCTCTGTCTCTGCTCATTCCTTTCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAACCCCCCTCTAAACGCTCTTCCATTTTCCCCTCCAGAGTCTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTAGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTGCGATTTTATTCTCTTGTTGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAAAAACAGGAAATTGATATTTTCAGAGAAGGAAGCTGCGCGGTCAAAGTTTTCTGGGCAAGTGGCTGTGGGGGATGTTTATGAAGGCAAAGTTGGATCTGTGGAGGATTATGGTGCTTTTGTACATCTACGTCTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAGGTCATTAATGTTAACAAGAATAAGTCTCGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACCTGATTCTTTTGGACCTAAAGGCGACAGCGAAATAATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAATCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGCACCTCCCGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGGGCATTGCAGCGTGTGTTGGAACGTGTCCCGTGA

Homology

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BLAST of CSPI04G03160 vs. Swiss-Prot
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.0e-20
Identity = 56/190 (29.47%), Postives = 102/190 (53.68%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S+R+ +    W+  R+      + +G+I G+N GG++     L GF+PF Q+S   S +E
Sbjct: 164 SLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEE 223

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSV 191
                      L+   I +K ++ DE+  +L+ S ++A       Q+ +G V  G V S+
Sbjct: 224 -----------LLEKEIPLKFVEVDEEQSRLVMSNRKAMADS-QAQLGIGSVVTGTVQSL 283

Query: 192 EDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRIT 251
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++ + R++
Sbjct: 284 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVS 335

Query: 252 LSIRQLEEDP 262
           LS ++LE  P
Sbjct: 344 LSTKKLEPTP 335

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BLAST of CSPI04G03160 vs. Swiss-Prot
Match: RS1B_SYNY3 (30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1b PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.5e-19
Identity = 59/201 (29.35%), Postives = 109/201 (54.23%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S R+ +    W+   E  +SG   E  + G+N GG++     L GF+P   L        
Sbjct: 96  SRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGLRGFIPRSHLMH------ 155

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSV 191
                +D   +L+G ++   +++A++ N KL+ +++   +++  G++A G++YEGKV  +
Sbjct: 156 -----KDNMDALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIAAGNIYEGKVAKI 215

Query: 192 EDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRIT 251
           + YG FV +        +TGL+HVS+VS   V  +  + + G  ++V V  +++ K+RI+
Sbjct: 216 QPYGVFVEIE------GVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEYKNRIS 275

Query: 252 LSIRQLEEDP--LLETLDKVI 271
           LS R LE  P  L+E  D+++
Sbjct: 276 LSTRILETYPGELVEKFDEMM 279

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BLAST of CSPI04G03160 vs. Swiss-Prot
Match: RPS1_ARATH (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.5e-19
Identity = 56/190 (29.47%), Postives = 101/190 (53.16%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSV 191
                      L+   I +K ++ DE+  KL+ S ++A       Q+ +G V  G V S+
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAVADS-QAQLGIGSVVLGVVQSL 286

Query: 192 EDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRIT 251
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++++ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 252 LSIRQLEEDP 262
           LS ++LE  P
Sbjct: 347 LSTKKLEPTP 338

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BLAST of CSPI04G03160 vs. Swiss-Prot
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4)

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-18
Identity = 55/190 (28.95%), Postives = 96/190 (50.53%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S+RR      W+  R+           +  +N GG LVR   L GF+P   +S +   KE
Sbjct: 99  SIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHIS-TRKAKE 158

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSV 191
                      L+G  + +K ++ DE   +L+ S + A   +   ++ VG+V  G V  +
Sbjct: 159 ----------DLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 218

Query: 192 EDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRIT 251
           + YGAF+ +        ++GL+H+SE+S D ++    + +  DEV V +I+++  + RI+
Sbjct: 219 KPYGAFIDIG------GVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRIS 271

Query: 252 LSIRQLEEDP 262
           LS +QLE +P
Sbjct: 279 LSTKQLEPEP 271

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BLAST of CSPI04G03160 vs. Swiss-Prot
Match: RS1_NEIMB (30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) GN=rpsA PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-18
Identity = 63/197 (31.98%), Postives = 96/197 (48.73%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S  +A+R+ADW A  E +++G I  G I G   GGL V   S+  FLP   +        
Sbjct: 86  SREKAKRAADWIALEEAMENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDV-----R 145

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQ-------VAVGDVY 191
           P K          G  I  KVI+ D+K   ++ S +    +    +       +  G V 
Sbjct: 146 PVKDTSHFE----GKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVI 205

Query: 192 EGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVN 251
           +G V ++ DYGAFV L   DGL H+T      +++W  V+   ++L  G EV  KV+  +
Sbjct: 206 KGIVKNITDYGAFVDLGGIDGLLHIT------DLAWRRVKHPSEVLEVGQEVEAKVLKFD 265

Query: 252 KNKSRITLSIRQLEEDP 262
           + K R++L ++QL EDP
Sbjct: 266 QEKQRVSLGMKQLGEDP 267

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BLAST of CSPI04G03160 vs. TrEMBL
Match: A0A0A0KTX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012510 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 1.0e-198
Identity = 375/378 (99.21%), Postives = 376/378 (99.47%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS-ILPLKPPSKRSSIFPSRVSLSGKP 60
           MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS ILPLK PSKRSSIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180
           FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240
           VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETII 300
           VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPKGDSEIIPLPGLETII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360
           EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS
Sbjct: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360

Query: 361 LDQEGIKRALQRVLERVP 378
           LDQEGIKRALQRVLERVP
Sbjct: 361 LDQEGIKRALQRVLERVP 378

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BLAST of CSPI04G03160 vs. TrEMBL
Match: D7U9K6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g00830 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.5e-138
Identity = 276/392 (70.41%), Postives = 314/392 (80.10%), Query Frame = 1


Query: 3   IFVATIASVSAHSFLSLLASTSDASSTSSSSSSILPLKPPSKRSSIF------------- 62
           IF     SV+  S LS L     +S+T+SS+S ++    PSK SS +             
Sbjct: 2   IFSGASGSVTGLSILSKLFCWDSSSNTNSSASLLIN---PSKISSFYRRSPLRRSPFHIA 61

Query: 63  PSRVSLSGKPDPIAGVLDTSP----ESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAG 122
            +RVS  G     AGV++ SP    +++R+ARRSADWKAAR +L+SGFIYEGRIEG N G
Sbjct: 62  TARVSTEGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGG 121

Query: 123 GLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFS 182
           GLLVRFYSLVGFLPFPQLSPSHSCKEP+K+IQ+IAK LIGSLISVKVI ADE+ RKLIFS
Sbjct: 122 GLLVRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFS 181

Query: 183 EKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQD 242
           EKEAA  KFS Q+ +GD++E  VGSVEDYGAFVHLR  DGLYHLTGLVHVSEVSWDLVQD
Sbjct: 182 EKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQD 241

Query: 243 VRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKG 302
           VRD+L+EGDEV VK++ V++ KSRITLSI+QLEEDPLLETLDKVIPQD S  PDS     
Sbjct: 242 VRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSD 301

Query: 303 DSEIIPLPGLETIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLA 362
             +I PLPGLETI EELLQEEGI DVR++RQGFEKRVVSQDLQLWLSNAP V+K+FTLLA
Sbjct: 302 SYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLA 361

Query: 363 RAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 378
           RAGRQVQEIQLTTSLDQEGIK+ALQRVLERVP
Sbjct: 362 RAGRQVQEIQLTTSLDQEGIKKALQRVLERVP 390

[Close]

BLAST of CSPI04G03160 vs. TrEMBL
Match: A5BZI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006784 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 9.5e-133
Identity = 276/420 (65.71%), Postives = 314/420 (74.76%), Query Frame = 1


Query: 3   IFVATIASVSAHSFLSLLASTSDASSTSSSSSSILPLKPPSKRSSIF------------- 62
           IF     SV+  S LS L     +S+T+SS+S ++    PSK SS +             
Sbjct: 2   IFSGASGSVTGLSILSKLFCWDSSSNTNSSASLLIN---PSKISSFYRRSPLRRSPFHIA 61

Query: 63  PSRVSLSGKPDPIAGVLDTSP----ESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAG 122
            +RVS  G     AGV++ SP    +++R+ARRSADWKAAR +L+SGFIYEGRIEG N G
Sbjct: 62  TARVSTEGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGG 121

Query: 123 GLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFS 182
           GLLVRFYSLVGFLPFPQLSPSHSCKEP+K+IQ+IAK LIGSLISVKVI ADE+ RKLIFS
Sbjct: 122 GLLVRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFS 181

Query: 183 EKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSD----------GLYHLTGLVHV 242
           EKEAA  KFS Q+ +GD++E  VGSVEDYGAFVHLR  D          GLYHLTGLVHV
Sbjct: 182 EKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHV 241

Query: 243 SEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIP---- 302
           SEVSWDLVQDVRD+L+EGDEV VK++ V++ KSRITLSI+QLEEDPLLETLDKVIP    
Sbjct: 242 SEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQIIF 301

Query: 303 --------------QDSSAEPDSFGPKGDSEIIPLPGLETIIEELLQEEGIVDVRVNRQG 362
                         QD S  PDS       +I PLPGLETI EELLQEEGI DVR++RQG
Sbjct: 302 LLHRTKSSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQG 361

Query: 363 FEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 378
           FEKRVVSQDLQLWLSNAP V+K+FTLLARAGRQVQEIQLTTSLDQEGIK+ALQRVLERVP
Sbjct: 362 FEKRVVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKALQRVLERVP 418

[Close]

BLAST of CSPI04G03160 vs. TrEMBL
Match: A0A059B0Z8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02624 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.8e-131
Identity = 239/308 (77.60%), Postives = 272/308 (88.31%), Query Frame = 1


Query: 70  PESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSC 129
           P++ R+AR SADWKAAR Y +SG IY+GR+EG N GGLLVRFYSLVGFLPFPQLSPS+SC
Sbjct: 95  PDAERQARWSADWKAARAYNESGLIYKGRVEGFNGGGLLVRFYSLVGFLPFPQLSPSYSC 154

Query: 130 KEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVG 189
           KEP K+IQ++AKSLIGS++ VKVIQADE +R+LIFSEKEA  SK SGQ+ VGD+++ +VG
Sbjct: 155 KEPAKNIQEVAKSLIGSVVPVKVIQADEDSRQLIFSEKEAVWSKVSGQINVGDIFQARVG 214

Query: 190 SVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSR 249
           SVEDYGAFVHL+  DGLYHLTGLVHVSEVSWDLVQDVRDILSE DEV VKVIN+++ KSR
Sbjct: 215 SVEDYGAFVHLQFPDGLYHLTGLVHVSEVSWDLVQDVRDILSENDEVKVKVINIDREKSR 274

Query: 250 ITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETIIEELLQEEGIV 309
           ITLS++QLEEDPLLETLDKVIPQD S   D+      S+I PLPGLE II+ELLQEEGI 
Sbjct: 275 ITLSMKQLEEDPLLETLDKVIPQDGSVNSDASSTNSSSKIDPLPGLEIIIQELLQEEGIE 334

Query: 310 DVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRAL 369
           DVR+NRQGFEKRVVSQDLQLWLSNAPP +KKF LLARAGRQVQEIQLTT LDQ+GI++AL
Sbjct: 335 DVRINRQGFEKRVVSQDLQLWLSNAPPTDKKFILLARAGRQVQEIQLTTLLDQDGIRKAL 394

Query: 370 QRVLERVP 378
           QRVLERVP
Sbjct: 395 QRVLERVP 402

[Close]

BLAST of CSPI04G03160 vs. TrEMBL
Match: A0A0D2R842_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G022200 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 8.9e-131
Identity = 267/403 (66.25%), Postives = 304/403 (75.43%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSS--------------------SSSSILPLK 60
           MP+  AT+ SVS   FLS L +  D SS S                     SSSS+  LK
Sbjct: 1   MPVSTATLGSVS---FLSQLFNP-DVSSLSCFVHHTKLSTLYSKPSLLRKPSSSSLYHLK 60

Query: 61  PPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVRR------ARRSADWKAAREYLDSGFI 120
             +  +S  P   +       +  +LD S  +         ARRSADWKAAR YL SGFI
Sbjct: 61  VSASSASANPKTDNSQQAEAAVTAILDNSVSTDELKPAPAPARRSADWKAARAYLHSGFI 120

Query: 121 YEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQ 180
           Y GR+EG N GGLLVRFYSLVGFLPFPQLSPSHSCKEP K+I  IAK L+GS++SVKVIQ
Sbjct: 121 YGGRVEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPNKTIHQIAKGLVGSILSVKVIQ 180

Query: 181 ADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVH 240
           A+E++RKLIFSEKEA  +KFS Q+ VGDV+EGKVGSVEDYGAFVHLR  DGLYHLTGLVH
Sbjct: 181 AEEESRKLIFSEKEAVWTKFSTQINVGDVFEGKVGSVEDYGAFVHLRFPDGLYHLTGLVH 240

Query: 241 VSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDS 300
           VSEVSWDLVQDVRDIL+EGD+V VKV+N+++ KSR+TLSI+QLEEDPLLETLDKVIPQD 
Sbjct: 241 VSEVSWDLVQDVRDILTEGDDVRVKVVNIDRGKSRLTLSIKQLEEDPLLETLDKVIPQDG 300

Query: 301 SAEPDSFGPKGDSEIIPLPGLETIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNA 360
           SA+ DS      S I PLPGL+ I +ELLQE+GI DVR++RQGFEKRVVSQDLQLWLSNA
Sbjct: 301 SADSDSLTTSNSSTIEPLPGLDAIFKELLQEDGINDVRISRQGFEKRVVSQDLQLWLSNA 360

Query: 361 PPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 378
           PP +  FTLLARAGRQVQEIQL TSLDQEGIK+ALQRVLERVP
Sbjct: 361 PPSDNMFTLLARAGRQVQEIQLATSLDQEGIKKALQRVLERVP 399

[Close]

BLAST of CSPI04G03160 vs. TAIR10
Match: AT3G23700.1 (AT3G23700.1 Nucleic acid-binding proteins superfamily)

HSP 1 Score: 414.5 bits (1064), Expect = 7.2e-116
Identity = 228/363 (62.81%), Postives = 270/363 (74.38%), Query Frame = 1


Query: 15  SFLSLLASTSDASSTSSSSSSILPLKPPSKRSSIFPSRVSLSGKPDPIAGVLDTSPESVR 74
           SF S   + +D +S  S+SSS+L     S  +S+                + DTS E+  
Sbjct: 53  SFSSSATADTDRNSDQSASSSVL-----SASNSL----------------LRDTSDEA-- 112

Query: 75  RARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYK 134
            A   +DWK A+ Y  SG  +EG ++G N GGLL+RF+SLVGFLP+PQLSPS SCKEP K
Sbjct: 113 SAAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQK 172

Query: 135 SIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDY 194
           SI +IAK+L+GS + VKV+QADE+NRKLI SEK A   K+S  V VGDV+ G+VGSVEDY
Sbjct: 173 SIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDY 232

Query: 195 GAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSI 254
           GAF+HLR  DGLYHLTGLVHVSEVSWD VQDVRD+L +GDEV V V N++K KSRITLSI
Sbjct: 233 GAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 292

Query: 255 RQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETIIEELLQEEGIVDVRVN 314
           +QLE+DPLLETLDKVI +DSS    S        I PLPGLETI+EELL+E+GI  V++N
Sbjct: 293 KQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEAVKIN 352

Query: 315 RQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE 374
           RQGFEKRVVSQDLQLWLSN PP + KF LLARAGRQVQEI LTTSL+Q GIK+ALQ VLE
Sbjct: 353 RQGFEKRVVSQDLQLWLSNTPPSDGKFVLLARAGRQVQEIHLTTSLEQGGIKKALQHVLE 392

Query: 375 RVP 378
           RVP
Sbjct: 413 RVP 392

[Close]

BLAST of CSPI04G03160 vs. TAIR10
Match: AT1G12800.1 (AT1G12800.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 79/249 (31.73%), Postives = 123/249 (49.40%), Query Frame = 1


Query: 137 QDIAKSLIGSLISVKVIQADEKNRKLIFS------EKEAARSK-FSGQVAVGDVYEGKVG 196
           Q    S +G  I V V+ A+  +RKLIFS      E+E  + +    ++ VGDV +  + 
Sbjct: 531 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 590

Query: 197 SVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSR 256
            +  +G F  L        +  LVH SEVSWD   D       G  V  KV  ++    R
Sbjct: 591 KITYFGIFCELE------GVPALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLDFALER 650

Query: 257 ITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPL--PGLETIIEELLQEEG 316
           I LS++++  DPL E L+ V+  D+    D  G +  +  +    P +E++I+EL   EG
Sbjct: 651 IFLSLKEITPDPLTEALESVVGGDN----DQLGGRLQAAELDAEWPDVESLIKELEMVEG 710

Query: 317 IVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKR 376
           I  V  +R  F    ++   Q+++  AP  E ++ LLARAG +VQE+ +  SL +E +K 
Sbjct: 711 IQSVSKSR-FFLSPGLAPTFQVYM--APMFENQYKLLARAGNRVQELIVEASLSKEEMKS 766

[Close]

BLAST of CSPI04G03160 vs. TAIR10
Match: AT5G30510.1 (AT5G30510.1 ribosomal protein S1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-20
Identity = 56/190 (29.47%), Postives = 101/190 (53.16%), Query Frame = 1


Query: 72  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 131
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 132 PYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSV 191
                      L+   I +K ++ DE+  KL+ S ++A       Q+ +G V  G V S+
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAVADS-QAQLGIGSVVLGVVQSL 286

Query: 192 EDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRIT 251
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ ++++ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 252 LSIRQLEEDP 262
           LS ++LE  P
Sbjct: 347 LSTKKLEPTP 338

[Close]

BLAST of CSPI04G03160 vs. TAIR10
Match: AT4G29060.1 (AT4G29060.1 elongation factor Ts family protein)

HSP 1 Score: 52.8 bits (125), Expect = 5.5e-07
Identity = 41/160 (25.62%), Postives = 82/160 (51.25%), Query Frame = 1


Query: 165 SEKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQ 224
           SE  A +++   ++  G  + GKV +++ +GAFV      G +   GLVHVS++S + V+
Sbjct: 123 SEMPAVKNE---ELVPGATFTGKVRAIQPFGAFVDF----GAF-TDGLVHVSQLSDNFVK 182

Query: 225 DVRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFG-- 284
           DV  +++ G EV V+++  +    RI+L++R+ ++ P  ++     P+       S G  
Sbjct: 183 DVSSVVTIGQEVKVRLVEADIESKRISLTMRENDDPPKRQSGGSDKPRSGGKRDGSKGGG 242

Query: 285 -PKGD---SEIIPLPGLETIIEELLQEEGIVDVRVNRQGF 319
             KG+   S+      L+ +++ L +    + +    +GF
Sbjct: 243 QRKGEGFNSKFAKGQMLDGVVKNLTRSGAFITIGEGEEGF 274

[Close]

BLAST of CSPI04G03160 vs. NCBI nr
Match: gi|449468800|ref|XP_004152109.1| (PREDICTED: uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus])

HSP 1 Score: 700.7 bits (1807), Expect = 1.4e-198
Identity = 375/378 (99.21%), Postives = 376/378 (99.47%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS-ILPLKPPSKRSSIFPSRVSLSGKP 60
           MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS ILPLK PSKRSSIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180
           FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240
           VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETII 300
           VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPKGDSEIIPLPGLETII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360
           EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS
Sbjct: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360

Query: 361 LDQEGIKRALQRVLERVP 378
           LDQEGIKRALQRVLERVP
Sbjct: 361 LDQEGIKRALQRVLERVP 378

[Close]

BLAST of CSPI04G03160 vs. NCBI nr
Match: gi|778689981|ref|XP_011653045.1| (PREDICTED: uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus])

HSP 1 Score: 694.9 bits (1792), Expect = 7.8e-197
Identity = 375/382 (98.17%), Postives = 376/382 (98.43%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS-ILPLKPPSKRSSIFPSRVSLSGKP 60
           MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSS ILPLK PSKRSSIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180
           FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240
           VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETII 300
           VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPKGDSEIIPLPGLETII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 301 EELLQEEG----IVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ 360
           EELLQEEG    IVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ
Sbjct: 301 EELLQEEGLNISIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ 360

Query: 361 LTTSLDQEGIKRALQRVLERVP 378
           LTTSLDQEGIKRALQRVLERVP
Sbjct: 361 LTTSLDQEGIKRALQRVLERVP 382

[Close]

BLAST of CSPI04G03160 vs. NCBI nr
Match: gi|659108067|ref|XP_008454000.1| (PREDICTED: uncharacterized protein LOC103494553 isoform X2 [Cucumis melo])

HSP 1 Score: 664.8 bits (1714), Expect = 8.7e-188
Identity = 355/378 (93.92%), Postives = 364/378 (96.30%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASST-SSSSSSILPLKPPSKRSSIFPSRVSLSGKP 60
           MPIF+ATIASVS HSFLSLLASTSDASST SSSSSSILPLK PSKR SIFPSRVSLSGKP
Sbjct: 45  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 104

Query: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSL+GFLP
Sbjct: 105 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 164

Query: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180
           FPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV 
Sbjct: 165 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVG 224

Query: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240
           VGDVYE KVGS+EDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 225 VGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 284

Query: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETII 300
           VINV+++KSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPK DSEIIPLPGL TII
Sbjct: 285 VINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII 344

Query: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360
           EEL QEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTS
Sbjct: 345 EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTS 404

Query: 361 LDQEGIKRALQRVLERVP 378
           LDQEGIKRALQRVLERVP
Sbjct: 405 LDQEGIKRALQRVLERVP 422

[Close]

BLAST of CSPI04G03160 vs. NCBI nr
Match: gi|659108065|ref|XP_008453999.1| (PREDICTED: uncharacterized protein LOC103494553 isoform X1 [Cucumis melo])

HSP 1 Score: 659.1 bits (1699), Expect = 4.8e-186
Identity = 355/382 (92.93%), Postives = 364/382 (95.29%), Query Frame = 1


Query: 1   MPIFVATIASVSAHSFLSLLASTSDASST-SSSSSSILPLKPPSKRSSIFPSRVSLSGKP 60
           MPIF+ATIASVS HSFLSLLASTSDASST SSSSSSILPLK PSKR SIFPSRVSLSGKP
Sbjct: 45  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 104

Query: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSL+GFLP
Sbjct: 105 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 164

Query: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180
           FPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV 
Sbjct: 165 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVG 224

Query: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240
           VGDVYE KVGS+EDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 225 VGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 284

Query: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETII 300
           VINV+++KSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPK DSEIIPLPGL TII
Sbjct: 285 VINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII 344

Query: 301 EELLQEEG----IVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ 360
           EEL QEEG    IVDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQ
Sbjct: 345 EELQQEEGLNISIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQ 404

Query: 361 LTTSLDQEGIKRALQRVLERVP 378
           LTTSLDQEGIKRALQRVLERVP
Sbjct: 405 LTTSLDQEGIKRALQRVLERVP 426

[Close]

BLAST of CSPI04G03160 vs. NCBI nr
Match: gi|225433644|ref|XP_002264430.1| (PREDICTED: uncharacterized protein LOC100244532 [Vitis vinifera])

HSP 1 Score: 500.7 bits (1288), Expect = 2.2e-138
Identity = 276/392 (70.41%), Postives = 314/392 (80.10%), Query Frame = 1


Query: 3   IFVATIASVSAHSFLSLLASTSDASSTSSSSSSILPLKPPSKRSSIF------------- 62
           IF     SV+  S LS L     +S+T+SS+S ++    PSK SS +             
Sbjct: 2   IFSGASGSVTGLSILSKLFCWDSSSNTNSSASLLIN---PSKISSFYRRSPLRRSPFHIA 61

Query: 63  PSRVSLSGKPDPIAGVLDTSP----ESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAG 122
            +RVS  G     AGV++ SP    +++R+ARRSADWKAAR +L+SGFIYEGRIEG N G
Sbjct: 62  TARVSTEGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGG 121

Query: 123 GLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFS 182
           GLLVRFYSLVGFLPFPQLSPSHSCKEP+K+IQ+IAK LIGSLISVKVI ADE+ RKLIFS
Sbjct: 122 GLLVRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFS 181

Query: 183 EKEAARSKFSGQVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQD 242
           EKEAA  KFS Q+ +GD++E  VGSVEDYGAFVHLR  DGLYHLTGLVHVSEVSWDLVQD
Sbjct: 182 EKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQD 241

Query: 243 VRDILSEGDEVTVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKG 302
           VRD+L+EGDEV VK++ V++ KSRITLSI+QLEEDPLLETLDKVIPQD S  PDS     
Sbjct: 242 VRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSD 301

Query: 303 DSEIIPLPGLETIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLA 362
             +I PLPGLETI EELLQEEGI DVR++RQGFEKRVVSQDLQLWLSNAP V+K+FTLLA
Sbjct: 302 SYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLA 361

Query: 363 RAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 378
           RAGRQVQEIQLTTSLDQEGIK+ALQRVLERVP
Sbjct: 362 RAGRQVQEIQLTTSLDQEGIKKALQRVLERVP 390

The following BLAST results are available for this feature:

BLAST of CSPI04G03160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RR1_SPIOL	7.0e-20	29.47	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1	[more]
RS1B_SYNY3	3.5e-19	29.35	30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
RPS1_ARATH	4.5e-19	29.47	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=...	[more]
RS1_SYNP6	3.8e-18	28.95	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]
RS1_NEIMB	8.5e-18	31.98	30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) GN=...	[more]

BLAST of CSPI04G03160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTX2_CUCSA	1.0e-198	99.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012510 PE=4 SV=1	[more]
D7U9K6_VITVI	1.5e-138	70.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g00830 PE=4 SV=...	[more]
A5BZI0_VITVI	9.5e-133	65.71	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006784 PE=4 SV=1	[more]
A0A059B0Z8_EUCGR	6.8e-131	77.60	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02624 PE=4 SV=1	[more]
A0A0D2R842_GOSRA	8.9e-131	66.25	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G022200 PE=4 SV=1	[more]

BLAST of CSPI04G03160 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23700.1	7.2e-116	62.81	Nucleic acid-binding proteins superfamily	[more]
AT1G12800.1	2.0e-20	31.73	Nucleic acid-binding, OB-fold-like protein	[more]
AT5G30510.1	2.5e-20	29.47	ribosomal protein S1	[more]
AT4G29060.1	5.5e-07	25.63	elongation factor Ts family protein	[more]

BLAST of CSPI04G03160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468800\|ref\|XP_004152109.1\|	1.4e-198	99.21	PREDICTED: uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus]	[more]
gi\|778689981\|ref\|XP_011653045.1\|	7.8e-197	98.17	PREDICTED: uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus]	[more]
gi\|659108067\|ref\|XP_008454000.1\|	8.7e-188	93.92	PREDICTED: uncharacterized protein LOC103494553 isoform X2 [Cucumis melo]	[more]
gi\|659108065\|ref\|XP_008453999.1\|	4.8e-186	92.93	PREDICTED: uncharacterized protein LOC103494553 isoform X1 [Cucumis melo]	[more]
gi\|225433644\|ref\|XP_002264430.1\|	2.2e-138	70.41	PREDICTED: uncharacterized protein LOC100244532 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003029	S1_domain
IPR012340	NA-bd_OB-fold
IPR022967	S1_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0008150	biological_process
biological_process	GO:0034337	RNA folding
biological_process	GO:0009409	response to cold
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000481	maturation of 5S rRNA
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042742	defense response to bacterium
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G03160.1	CSPI04G03160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 178..255 score: 1.4
IPR003029	S1 domain	PROFILE	PS50126	S1	coord: 181..255 score: 21.191coord: 92..167 score: 13
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 82..168 score: 7.4E-11coord: 173..257 score: 1.9
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 179..268 score: 4.87E-22coord: 90..167 score: 4.6
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 90..167 score: 2.5E-5coord: 179..255 score: 1.3
None	No IPR available	PANTHER	PTHR23270	PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5	coord: 73..377 score: 2.2E
None	No IPR available	PANTHER	PTHR23270:SF9	SUBFAMILY NOT NAMED	coord: 73..377 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G03160	Cla010859	Watermelon (97103) v1	cpiwmB316
CSPI04G03160	Csa4G012510	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G03160	MELO3C017732	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G03160	ClCG07G015520	Watermelon (Charleston Gray)	cpiwcgB337
CSPI04G03160	Lsi07G000290	Bottle gourd (USVL1VR-Ls)	cpilsiB303
CSPI04G03160	MELO3C017732.2	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G03160	CsaV3_4G003140	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G03160	Cla97C07G142500	Watermelon (97103) v2	cpiwmbB327
CSPI04G03160	Bhi01G002157	Wax gourd	cpiwgoB372
CSPI04G03160	Cucsa.094980	Cucumber (Gy14) v1	cgycpiB103
CSPI04G03160	CmaCh14G014640	Cucurbita maxima (Rimu)	cmacpiB263
CSPI04G03160	CmoCh14G015010	Cucurbita moschata (Rifu)	cmocpiB250
CSPI04G03160	Cp4.1LG03g12690	Cucurbita pepo (Zucchini)	cpecpiB617
CSPI04G03160	CsGy4G003040	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G03160	Carg06616	Silver-seed gourd	carcpiB0133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G03160	Cucumber (Chinese Long) v2	cpicuB185
CSPI04G03160	Melon (DHL92) v3.5.1	cpimeB321
CSPI04G03160	Cucurbita pepo (Zucchini)	cpecpiB871
CSPI04G03160	Silver-seed gourd	carcpiB0730
CSPI04G03160	Cucumber (Chinese Long) v3	cpicucB218
CSPI04G03160	Cucurbita maxima (Rimu)	cmacpiB850
CSPI04G03160	Cucurbita moschata (Rifu)	cmocpiB833