CSPI03G37180 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G37180
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 32260625 .. 32263317 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTACAGGTTGGGATCAAACCTTCCACTTAATATGAACATATTTTCGTTTTCCTTTTTGAAGCTCAAATTTGATGAATTAGTAGTAGACACATGTCTTCATTTCCTTCTTGACTTTCCTACTCCTAACGAAATTACGATAATCGATGTTGTACCCCCCGATCTGGTTTTTGGTCCTCACAGCTCCATGAATTGAAAACCGTTCAAGTGATTTGTATGATTTTAACACATCATCATTCCATTCGATGGGACAATCGATGATTTCCAAAACTCTTAGGGTTTCGGTGAATCTTTGAGTCCATTCCGGCAATTTTTTCACTATTGGAAGCTCTCTGATTGTGAACCTCTGAAGCCTGAACTCCACTCCTTTCAACGTCAGTGTAAGTTTTTTGCAACTCCAAATCACCAAATTCTTTAGTGATATTAGCGATCCTATCTCGTTTGGCAACGATTTCAATGTCTTACAATCGTAAATCATTAGGGTTTCTAGGCGTACGAGGCATGACGGCTTTTTGAATAGATCTTGTAGGTTTTGGCACCCTCCAATTGCGAGAAATCGAAGAGAAGTCATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAGCCAAAACCATATTCCTCTAGTTCTTGTAGGAAACATCTTGAGCATAGTTCCTTGAAACAATTCTCACCTATTTTTTCCAAAGATAAGTAATTCTCTTTGGGTAGGAGGTCGCTTGCAATCCATAATTGAATCACATCATTGGAAGACAATATGCGATCTTTTTTTAATTGGGAACAATAAAGAAAACAACGTTGTAGGTGTGAAGGCATTTGATCATAGCATAATCTAAGTGTAGGTAAAATACTCTTATTCCCATCCTCCTCTTCCTCATGTTCCCATAACTCATCGATGACACCGTTCCACTCAGCTATACTAGTTTTTGATAGCAGACCCCCCAGGCACTTTATTGCCAAAGGAACCCCATGACATTTCTGCTCAATTACTTCTTGTATTTTTGTGAGATTTGGGATTTGTGCTTCCTGTGTTTCTGTGAAAGCATGAACTTTGAACAAAGACAATGAATTTTCCTTTGACAACCTCTCAACTTTGAAAATTGTTTGATGTTTCATATTATCCTTGTTAACATCTGAAGGTTTTGTGGCTTCTGGGGATGGAACTACCTGGCTCTCGTTCTTGTAGAGTTTTTTTAGTCCGACAGCATCAGCTATTTTCTCATTCTGAGTGGTCACTATGATTTTGCTGCCACGGTTTCCCATCCCCAATAAACTTTGAAATATGGAGCAATTACCAAGGTTTTTGATTGAAATATCTTGAAAAACAATCAGAAATTTTTTATCCCTCAGAAATTGTTGAACTGCAAAGCACAATTGTTTCTCAGTCAAGTTATCACATGTTACTTGGCAATGTGAAAAACTGAGCATCTCTTTTATCAATCTCTGTGGATCAAATTCCTCTTTCACACAAATCCACAATCTTGATGGAAACGTGTTCACCAGATTGTTGTAAAAGAATTTGGCAAGTGTGGTCTTACCTATGCCTGGTTCTCCAACTATGTGGAAGAGCCCGTGAGTAGATTTTTTGAAATGATCCAGAAAGTTATGATATCGTTTGTCTTGGAAAACCTTGGGAGCATTAGTCAACGAGTAAAGCAATTGCCAACTTGGTTTCATGAGTCTTGTCGAAACTTCAGTAGCACTAAGAAAGGAGTGTGTTGTCTCCATGTTTGTTAGATTGAAGCCATACATATGGGATGCAATTTCATCCAAATCGTCGCATAGTTTCATCATTTTTTTAGTTTGATCAATTTGACTGAAGTTAAAGGAAGGAAGAAATACCCATTTTCCAGTAGCCTCTTGTTTTTTGACTTCCCTATTGGATTCATATAGCAATTCCTCAATTTGTAAAAATACACTTTGAAGCTTCTGTAGCCAATCATTTAGACAATGACGATATTCTTCCTTTTCAGCATCCTTAAGAATTGTTTTAAGGCTCAACATGGTATACTGCATTCGTCTCAGGTACATTGGGAATTTTTTTAGCTCTATCAAGATATTTTCTGCTTGCTCATAGATGCAACAAGCCATTCGTATATATTTGGAATATGTCGTTTCTCTTCCTTTCAATTCGTTGAGTTTGAATGATCTATAGATGAAGACAGTTATATAGCACCTACCCATGGATTCGTTGCATTATCAAAAAGCAAAGTAGCATTAAAACTTACTTTTCTTTTGGGGAAATGTATATATTAGAATAGGGACACTTACGCAAGTATGTACAAATACTTGTAT

mRNA sequence

ATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAG

Coding sequence (CDS)

ATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAG
Homology
[Close]
BLAST of CSPI03G37180 vs. TrEMBL
Match: A0A0A0LC31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814395 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.7e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL
Sbjct: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120
           FPCKSRYLSCTRFSTALGI CRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV
Sbjct: 61  FPCKSRYLSCTRFSTALGIPCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120

Query: 121 FVTSNTCFCVSRRASFSMRGCNLNQ 146
           FVTSNTCFCVSRRASFS+RGCNLNQ
Sbjct: 121 FVTSNTCFCVSRRASFSIRGCNLNQ 145

[Close]
BLAST of CSPI03G37180 vs. TrEMBL
Match: A0A0A0LH56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815405 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-25
Identity = 68/112 (60.71%), Postives = 74/112 (66.07%), Query Frame = 1 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFL RR LF VT +YLRL+  LISLG S SAEQD RIKVCK   L IEFG  LIF+
Sbjct: 9   MVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIEFGRCLIFV 68

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSL 113
            PCKSRYL         GISCR AL K N+L  L   MH   R+ALG T+ L
Sbjct: 69  LPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 120

[Close]
BLAST of CSPI03G37180 vs. NCBI nr
Match: gi|700204240|gb|KGN59373.1| (hypothetical protein Csa_3G814395 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 3.8e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL
Sbjct: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120
           FPCKSRYLSCTRFSTALGI CRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV
Sbjct: 61  FPCKSRYLSCTRFSTALGIPCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120

Query: 121 FVTSNTCFCVSRRASFSMRGCNLNQ 146
           FVTSNTCFCVSRRASFS+RGCNLNQ
Sbjct: 121 FVTSNTCFCVSRRASFSIRGCNLNQ 145

[Close]
BLAST of CSPI03G37180 vs. NCBI nr
Match: gi|700204243|gb|KGN59376.1| (hypothetical protein Csa_3G815405 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-25
Identity = 68/112 (60.71%), Postives = 74/112 (66.07%), Query Frame = 1 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFL RR LF VT +YLRL+  LISLG S SAEQD RIKVCK   L IEFG  LIF+
Sbjct: 9   MVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIEFGRCLIFV 68

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSL 113
            PCKSRYL         GISCR AL K N+L  L   MH   R+ALG T+ L
Sbjct: 69  LPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 120

The following BLAST results are available for this feature:
BLAST of CSPI03G37180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G37180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC31_CUCSA2.7e-7598.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814395 PE=4 SV=1[more]
A0A0A0LH56_CUCSA5.6e-2560.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815405 PE=4 SV=1[more]
BLAST of CSPI03G37180 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G37180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204240|gb|KGN59373.1|3.8e-7598.62hypothetical protein Csa_3G814395 [Cucumis sativus][more]
gi|700204243|gb|KGN59376.1|8.1e-2560.71hypothetical protein Csa_3G815405 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G37180.2CSPI03G37180.2mRNA
CSPI03G37180.1CSPI03G37180.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G37180Melon (DHL92) v3.6.1cpimedB208
CSPI03G37180Cucumber (Gy14) v2cgybcpiB111
CSPI03G37180Silver-seed gourdcarcpiB0178
CSPI03G37180Silver-seed gourdcarcpiB0280
CSPI03G37180Cucumber (Chinese Long) v3cpicucB145
CSPI03G37180Watermelon (97103) v2cpiwmbB189
CSPI03G37180Wax gourdcpiwgoB223
CSPI03G37180Cucumber (Gy14) v1cgycpiB504
CSPI03G37180Cucurbita maxima (Rimu)cmacpiB241
CSPI03G37180Cucurbita maxima (Rimu)cmacpiB839
CSPI03G37180Cucurbita moschata (Rifu)cmocpiB229
CSPI03G37180Cucurbita moschata (Rifu)cmocpiB824
CSPI03G37180Cucumber (Chinese Long) v2cpicuB120
CSPI03G37180Melon (DHL92) v3.5.1cpimeB214
CSPI03G37180Watermelon (Charleston Gray)cpiwcgB195
CSPI03G37180Watermelon (97103) v1cpiwmB198
CSPI03G37180Cucurbita pepo (Zucchini)cpecpiB599
CSPI03G37180Cucurbita pepo (Zucchini)cpecpiB866
CSPI03G37180Bottle gourd (USVL1VR-Ls)cpilsiB184