CSPI03G27700 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTTCTTCTTATTTTGATGTATGAGAAATTTTTACTATCATTTTTATTGACACAGTATTATGATGTATTTGGCAGGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAGAACGCTACGTGCTATTGGTATGTTGCATTTATTCCAATTTTATTACCTCTAGTTATGCCTTTTGTCTATTAAGTCATTATCTTAAGCATAGCTAGGTGGACAAGACACACATTGTCATCTCAAAAGTCAACAATTCAATTCTTCACCCACCCTATTGAGCTAAAACAAAAATATGAATCTCGCTCACTATTTTGGTGTTTTCTACTATATTAGTTGTTGAACCAGTTACCATTCAATCCAAATGTCAATATATTTGATCTCCCACTCTTACACTGTTGAACTAGGGAAAATAAGTGTCTAGAAAGCAGGTGTAAATTCTCTCTTGGCATCATTATCATACATCCACTCTGTTAGCTATCTTTCATATTAGTTACTGAACTAATTTTGTATTTCTCACACTATAAATCTAGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACCATTTTCAAGTTGTTGTGTTTGTATTGTTCAAGACCACATTTTGGAAAGAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATTTTAATATTCCATATTAACAGGGAAAAAAAACTTTCGACGACTACATTAACCTTTTGGTATTCGTAAAGCCTTCTATTCATATGAATTTTCACGATAGCGCTTATGCATTGGATAGATAAGTAGTAGATTAGTTTGATCATTTCCGTTCCTAGTATTTTTGCTCAGTACTCTGGAGTGGTGGTTGTTTCCATTGTGTTTTCTTATAATGGCACTAGATAGGTGTTTAGAATCACGTTGGAAAGATGTGAGGCCTCATGATCATAAGATACATGAGTTACTTCTCTCGTAGTCAATTGGTATAGAGATGAAGGTATTCATGTTTATCTTATATGATATCAAATATATGAAGTCCCCTCAAGTATTTGTTCCAAAAAAGAAAAAAGAAAGACAAAATTTGACCCAAGAAAGGTGAACCCAAAGAGATCTTGAGAGAGGAGGTATACAGAGGATCTTGCATTAGAAAAACTTACCATGATACTCTACTCGTTATCAACTATTTAGATGGATACCATTTTTATCTATTAATTGGAAGTTTGGAGAAGTACTTTCTTTCTCACCCCCTACATTCTCTCGTTTTCTGCCTTCCTCGAGTGGTCAGATTCGTTCGTTCTATTTACATTTGTAGATTTACTAATTCAAATGAATGGTATCATTGGAGATCGTCTCAATAAATAATGGTTAAGAGGTCAAAGTTTCAATTGATGGTGTCTACCTACCTATAAATTAGTTTCCTACGAGTTTTCTTGACATTCAAATGTTGTAGGCTAGACAAGTTGTTTGGTGAGATTAGTCGAGCTGCGCGTAGGCTAGTCTAGACACTCACAGATATAAAAAAAACGCATAGTATCATTTGAATTGAACCTTATTATAATTTCGTGTAGGGAACTGTTCTTAATGACTTGCACATAATGTTGTGCTTCTGAATTTGCATTCCCAACTTTTGAACTTATATTTCTCGTCTTCTTTTCCCTCTCTCCTTTGTCTTTCTAGGTCGCGGGAAAAGGTTGATTTGAGTTACAAGAAGAACGGCAAGTCGTGAATACTAGAAGTTCATCTGATTCATGGAAGTTGTCTTTGCCAACCTGTCGGCATCATGCACAGCTTCCCACATTGCAAAACTTGGCAGGAATCATTCTAACAGCCATGGTGGTCGCCAACATTTTTGTTAGTTATAAATATAATAGTGCAGGAAGCGAAAGGAATATGTATTAATGGTTTGAGCTATATCTTATTGAGCCATATCAGATGACAGGGAAAATTTTGTAGTTCCACTCCATTCATTTATTGTCACAAAACGAAGCATTTGAGAACAAATTCTCAAGTTTAGTCTTTATTCTTCTATTTGGTAAAATATAGTCTAATCTGTCATGATTAATTTTGTATCATACCTCTCTTTATAATATAAATTAATTTAAATTAGATGTTAA ATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTCGCGGGAAAAGGTTGATTTGAGTTACAAGAAGAACGGCAAGTCGTGA ATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTCGCGGGAAAAGGTTGATTTGAGTTACAAGAAGAACGGCAAGTCGTGA
BLAST of CSPI03G27700 vs. TrEMBL
Match: A0A0A0LBP9_CUCSA (Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_3G633280 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 8.2e-47 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. TrEMBL
Match: A0A0A0KW48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166940 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.3e-39 Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. TrEMBL
Match: A0A067KW09_JATCU (Gamma-tubulin complex component OS=Jatropha curcas GN=JCGZ_08590 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.5e-16 Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. TrEMBL
Match: M1BX27_SOLTU (Gamma-tubulin complex component OS=Solanum tuberosum GN=PGSC0003DMG400021318 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-14 Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 1
BLAST of CSPI03G27700 vs. TrEMBL
Match: A0A0V0HHC0_SOLCH (Gamma-tubulin complex component OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 9.1e-14 Identity = 45/89 (50.56%), Postives = 68/89 (76.40%), Query Frame = 1
BLAST of CSPI03G27700 vs. TAIR10
Match: AT1G80245.1 (AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component) HSP 1 Score: 68.2 bits (165), Expect = 3.4e-12 Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 1
BLAST of CSPI03G27700 vs. TAIR10
Match: AT4G00695.3 (AT4G00695.3 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 57.0 bits (136), Expect = 7.9e-09 Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 1
BLAST of CSPI03G27700 vs. NCBI nr
Match: gi|778682197|ref|XP_011651668.1| (PREDICTED: uncharacterized protein LOC101210446 isoform X2 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. NCBI nr
Match: gi|700203241|gb|KGN58374.1| (hypothetical protein Csa_3G633280 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. NCBI nr
Match: gi|778692248|ref|XP_011653427.1| (PREDICTED: uncharacterized protein LOC105435221 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39 Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. NCBI nr
Match: gi|700198692|gb|KGN53850.1| (hypothetical protein Csa_4G166940 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39 Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 1
BLAST of CSPI03G27700 vs. NCBI nr
Match: gi|778682178|ref|XP_011651660.1| (PREDICTED: uncharacterized protein LOC101210446 isoform X1 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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