CSPI03G21010 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G21010
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	Chr3 : 17104476 .. 17107556 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGTGTCACTAAAATCAATGATAAAGACTTTTGAGAAGGAAGATCAAGGAGTGTTAATCGAGTTGAGTACAATCGAACAATAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCGTTATCCCCAATTCCAGAAAGATGAAATTGAAAAATTAGTAAAGGAAATGTTGTAAGCCGAAATTATCCAGCCAAGCAAAAGTGCCTTTTCAAGTCCGGTGCTCCTTGTAAAGAAGAAAGATGGTAGCTGGTGATTCTGCGTGGATTACCGAGCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGTTAAATGACCAGCACCCAAGAATGTGAAGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTGTCCTAATGCATCATCAACGTCCAGTGGCTTTTTCAGTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCGTATTTTCACAAGTCTATTTTGGGAGGAGTTGTGGCGGTTGTTGGGAACTTAGTTAAGACTAAGCACCACCTACCATCCCCAAACAGATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGTACAGTTTGAGGTGGATGATTGGGTTTATGTGAAGTTACGCCCTTACCGCCAGTCCTCTCTCACCCATTTTAAGCACCCCAAATTGGCCCCAAGATTCATTGGCCCATTTGTCATTGTGGCACGAATTGGTCTGGTTGCATATCGTTTGGCTCTTCCCAAGGAGTCGCTTATTCACCCGGTCTTTCATGTTTCGATTCTTTAAAAAGCCGTAGGTTCAAACAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA

mRNA sequence

ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA

Coding sequence (CDS)

ATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGGACAGAAGCCTCGTAAAATCACAGGGAGCGGAAGAGTCAAAGAATAATTTAGCGGACTGTCTGAGTAATCTAAAACTCGAAGTTCAAAGAATTCTTTTGTCTTTTGGTAGTGTGTTTGAATCCAGAAATCAGTTGACACCACCTCGCAATCATGATCCAGGGGCCCGGGCGGTGAATGTGCGGCCTTATCCACTGAATCTTGGCACCATACCAGATAAGTATCCAATTCCCGTTGTTGATGAACTACTAGATGAATTATTCGGGGCAACCATATTTTCAAAAATTGATCTAAAGTCAGGCTATCACCAGATTAGAGTGCGAGTCGCCGATGTTCACAAAACGGCGCTTCGTACCCATGAAGGGCACTACGAATTTCTCGTGATGCCATTTGGGTTGAAGAATGCTCCAGCCACTTTTCAATCAGGAATGAATGATATTCTCCGCCCATACTTACGCAAATTTGTTTTGGTTTTCTTCGACGATATCCTAATCTACAACAAGTCACTAGAAGAACATTTGCAGCAATTGGTCGTGGTTTTAGAAACCTTAGTAGTTCATAAACTGGTGGCGAATTTTAAAAAATGTCAATTCGCAGTAGATCGAATTGAATATTTGGGTCACATTATCTCATCTGATGGGGTGGCGGCGGATCCAACGAAAATAATGGCTATGGAATTACAAGGTTTCTTGGGTCTTACAGGTTATTATCGGAAATTTGTGGCAAACTATGGTTCTATTGCACTACCCTTGACACAATTGTTAAAGAAAGGAAAGTTTCAGTGGAATGAGACAGCAAAAAATGCGTTCCAACAATTAAAATTTGCTATGATGTCGGTACCGGTGTTAGGTATTCCAGATTTTCCCAAGGTTTTGTGCTGGAAACTGATGTTTCAGGTGTTGATATTGGGGCTTCAAGCTTTGCCCGATACCCATAGGTTTAAAGCTGTGTATGAACGGGAACTTATGGCAATCGTGCGGGCTGTTCAAAAATGGTGCCCATATCTGTTAGGTAAGCCTTTTGTGGTGCGTACAGATAAAAAAAGTTTGAAGTTTCTTCTTGAACAACGAGCCATTGGGGGAGAATATCAGAGATGGATCACTAAACTATTGGGGTATGATTTTGTGATTGAATACAAGAAAGGAATGGAAAATAAAGCGGCTAATGCTTTATCACGATTACCACCGGTATTTGAATTGGGCCTCATAAGTGTTGTGAGCGGGCTCAATCCTTCGATTTTCATTGATCAAGTGGCTGGGAATGAAGCTCTGAATAGTATTCGGTTATCCTTGATAAATGGACAGCCAACCCCGGAGGGATATTCACTACATAGAGAGGTTCTATGCTATCACGGCCGGTTGGTTCTTTCGGAGGATTCCCCTACTATCCCCTTATTATTAGCGGAGTTTCATAACAGCCCGATAGGGGGACATCATGGCGCGTTGACAACATATCAAAGGCTAGCAAGGGAGGTATATTGGCGAGGTATGAAAGCACACATCCGCACATATGTTGCCGAATGTTCGGTTTGTCAACAAGCCAAATATTTGTCATTAACTCCAGCCGGTCTTCTTCAAGCATTACCCATTCCGGACCGTGTATGGGAGGATATTAGTATGGATTTTATTGAGGGTCTTCCTAAATCTGAGTGCTATGATGTCATATTGGTGGTTGTGGATAGACTTTCCAAGTATGCACATTTCATTCCTTTGAAGCATCCTTTTGGTGCAAAAGTTGTAGCTGCTGTTTTTATGCGGGAAATCATTCATTTGCATGGATGCCCCCGAAGTATAGTGTCGGATCGTGATCATGGTCAAACCGAAGTTGTCAATCGAGGGGTGGAGACGTATCTACGATGTTTTGCTATGAACACACCTAAGCAGTGGGCTAAATGGCTAGCTTGGGCTGAATTGAGCTATAATACAACTGTCCATACAGCCATATTGATGACCCCCTTCGAGGCTCACTATGGTCGACCACCTCCCTCTATATTACCATGCGTGAAGGAGTCGAGCCCGGTGAATGAAGTAGATCATTTGATGAAGGAAAGAGATGGAATTCTGAGAATTTTGAAGGCCAATTTATTGAAGGCACAACAGCGAATGGTCAAATACGCCAAATTGACCGACGGGAGGCCTCTATTTCCAATTCCAAAAGATTTGGCTGCTGATTTGTCGATGCAATTGTCTCCGGTAGAGGTGTTGGGAGTTCGCAAAACCAGAGAAAAGGGGGACAAGTTAGAAGTTTTGATTTTCTGGAGTGACGGTACACCTGAAAGTGCTACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCTTGAATTCCACCTTGAGGACAAGGTGGCTCTTTGGGGGGCGGGCAATGATAGACCCCACATAGTAAAGGTGTATTCACGTAGGAATAAAAGTGGGAAGAAGAAAGAATGA

Homology

[Close]

BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1


Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]

BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1


Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]

BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1


Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]

BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1


Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]

BLAST of CSPI03G21010 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-86
Identity = 220/718 (30.64%), Postives = 346/718 (48.19%), Query Frame = 1


Query: 78   PLNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHY 137
            PLN    P+ YP+P++++LL ++ G+TIF+K+DLKS YH IRVR  D HK A R   G +
Sbjct: 470  PLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVF 529

Query: 138  EFLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETL 197
            E+LVMP+G+  APA FQ  +N IL       V+ + DDILI++KS  EH++ +  VL+ L
Sbjct: 530  EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 198  VVHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLT 257
                L+ N  KC+F   +++++G+ IS  G       I  +          EL+ FLG  
Sbjct: 590  KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 258  GYYRKFVANYGSIALPLTQLLKKG-KFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLC 317
             Y RKF+     +  PL  LLKK  +++W  T   A + +K  ++S PVL   DF K + 
Sbjct: 650  NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 318  WKLMFQVLILG--LQALPDTHRFK----------------AVYERELMAIVRAVQKWCPY 377
             +     + +G  L    D  ++                 +V ++E++AI+++++ W  Y
Sbjct: 710  LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 378  LLG--KPFVVRTDKKSL--KFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANAL 437
            L    +PF + TD ++L  +   E         RW   L  ++F I Y+ G  N  A+AL
Sbjct: 770  LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADAL 829

Query: 438  SRL-------PPVFELGLISVVSGLN-PSIFIDQVAGNEALNSIRLSLINGQPTPEGYSL 497
            SR+       P   E   I+ V+ ++    F +QV      ++  L+L+N     E   +
Sbjct: 830  SRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNN----EDKRV 889

Query: 498  HREVLCYHGRLVLSEDSPTIP-------LLLAEFHNSPIGGHHGALTTYQRLAREVYWRG 557
               +    G L+ S+D   +P        ++ ++H      H G       + R   W+G
Sbjct: 890  EENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKG 949

Query: 558  MKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWEDISMDFIEGLPKSECYDVIL 617
            ++  I+ YV  C  CQ  K  +  P G LQ +P  +R WE +SMDFI  LP+S  Y+ + 
Sbjct: 950  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1009

Query: 618  VVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPRSIVSDRDH------------ 677
            VVVDR SK A  +P      A+  A +F + +I   G P+ I++D DH            
Sbjct: 1010 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1069

Query: 678  -----------------GQTEVVNRGVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTA 719
                             GQTE  N+ VE  LRC     P  W   ++  + SYN  +H+A
Sbjct: 1070 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSA 1129

[Close]

BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087GEK8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 1.4e-205
Identity = 375/689 (54.43%), Postives = 478/689 (69.38%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GAT+FSK+DLKSGYHQI V+  +V KTA RTH+GHYE
Sbjct: 675  LNKVTIPDSFPIPMIDQLLDELHGATVFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYE 734

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAP TFQ+ MN++ R +LRKFVLVFFDDIL+Y+ SL+EH + L VVL+ L 
Sbjct: 735  FLVMPFGLTNAPTTFQALMNEVFRAHLRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILF 794

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
              +L AN KKCQF    IEYLGH+IS +GV+ADP+K+ AM           L+GFLGLTG
Sbjct: 795  QQQLFANKKKCQFGSSSIEYLGHVISGEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTG 854

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYR+FV  YGSIA PLT LLKK KFQW+E A  AF++LK AM +VPVL + DF ++   +
Sbjct: 855  YYRRFVQGYGSIAKPLTSLLKKDKFQWSEEATVAFEKLKVAMSTVPVLALVDFSELFVVE 914

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                 + LG              QAL D  + K+VYERELMAIV A+QKW  YLLG+ F+
Sbjct: 915  SDASGIGLGAVLLQKQKPVAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFL 974

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR +  EYQ+W+TK+LG++F I YK G+ENKAA+ALSR+  + +L  
Sbjct: 975  VRTDQKSLKFLLEQREVNLEYQQWLTKILGFNFDIHYKPGLENKAADALSRVEGLPQLYA 1034

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +SV + +      ++V  N     I+  ++    T  GYS+ +  L Y+G+LVL ++S  
Sbjct: 1035 LSVPAAIQLEEINEEVDRNPVSKKIKEEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYL 1094

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            I +LL EFHNS +GGH G L T + L    YW+GM A I+T+VAEC VCQ+ KY +L P+
Sbjct: 1095 IKVLLHEFHNSRMGGHGGVLKTQRHLGALFYWQGMMADIKTFVAECVVCQKHKYSTLAPS 1154

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIP +VWEDIS+DF+EGLPKSE +D ILVVVDRL+KYAHFI L+HPFGAK +AA
Sbjct: 1155 GLLQPLPIPTQVWEDISLDFVEGLPKSEGFDAILVVVDRLTKYAHFIKLQHPFGAKEIAA 1214

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            VF++EI+ LHG P ++VSDRD                              GQTEV NRG
Sbjct: 1215 VFIQEIVRLHGYPSTMVSDRDTLFTGMFWTELFRLAGTSLNFSTAYHPQTDGQTEVTNRG 1274

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 716
            +ET LRCF  + PK+WA +L WAE  YN++ H+AI MTPF+A YGR PPS+L     S+ 
Sbjct: 1275 LETILRCFTSDKPKKWAAYLPWAEFCYNSSYHSAIQMTPFKALYGRDPPSLLRFEDGSTT 1334

[Close]

BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087G3S6_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 2.1e-201
Identity = 367/693 (52.96%), Postives = 468/693 (67.53%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GATIFSK+DLKSGYHQI V+  DV KTA RTH+GHYE
Sbjct: 701  LNKVTIPDSFPIPMIDQLLDELHGATIFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYE 760

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MND+ R YLRKFVLVFFDDIL+Y+KSL+EH Q L +VLE L 
Sbjct: 761  FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQ 820

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H+L AN KKC+F    +EYLGH++S  GVAADP KI AM           L+GFLGLTG
Sbjct: 821  QHQLFANKKKCEFGRTELEYLGHVVSGKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTG 880

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFV  YG IA PLT LLKK +FQW   A  AFQ+LK AM +VPVL + DF +    +
Sbjct: 881  YYRKFVQRYGEIARPLTALLKKDQFQWTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVE 940

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   LG              QAL +  R K+VYERELMAIV A+QKW  YLLG+ FV
Sbjct: 941  SDASGTGLGAVLMQSQRPLAYFSQALTERQRLKSVYERELMAIVFAIQKWRHYLLGRKFV 1000

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR I  EYQ+W+TKLLG+DF I+YK G+ENKAA+ALSR     +L  
Sbjct: 1001 VRTDQKSLKFLLEQREINMEYQKWLTKLLGFDFEIQYKPGLENKAADALSRKDMALQLCA 1060

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +S+ + +       +V  +  L  ++  ++    +   +S+ +  L   G+LV+   S  
Sbjct: 1061 LSIPAAIQLEQINTEVDNDPDLRKLKEEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRL 1120

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            + ++L EFHN  +GGH G L T +R+    YW+GM + IR +VA C VCQ+ KY +L PA
Sbjct: 1121 VNVILQEFHNGKLGGHGGVLKTQKRVEAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPA 1180

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIPD+VWEDISMDF+EGLPKSE ++V++VVVDRL+KYAHFI +KHP  A  VA 
Sbjct: 1181 GLLQPLPIPDQVWEDISMDFVEGLPKSEGFEVVMVVVDRLTKYAHFISMKHPVTAVEVAL 1240

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            +F +E++ LHG P++IVSDRD                              GQTEV NRG
Sbjct: 1241 IFTKEVVKLHGFPKTIVSDRDPLFTGRFWTEMFRLAGTSLCFSTAYHPQSDGQTEVTNRG 1300

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 720
            +ET LRCF+ + P+ W ++L WAEL YNT+ HTAI M+PF+A YGR PP+++     S+ 
Sbjct: 1301 METLLRCFSSDKPRCWVQFLHWAELCYNTSYHTAIKMSPFQAVYGREPPTLIKFETGSTS 1360

[Close]

BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087H8D5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 1.3e-198
Identity = 375/741 (50.61%), Postives = 484/741 (65.32%), Query Frame = 1


Query: 39   KLEVQR---ILLSFGSVFESRNQLTPP----RNHDPGAR-AVNVRPYPLNLGTIPDKYPI 98
            K E+++   ++L+ G + ES +  + P    R  D   R  V+ R   LN  T+ D YPI
Sbjct: 580  KAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRA--LNKATVGDSYPI 639

Query: 99   PVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAP 158
            P++D+LLDEL GA +FSK+DL+SGYHQIRVR  DV KTA RTH+GHYEFLVMPFGL NAP
Sbjct: 640  PMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAP 699

Query: 159  ATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQ 218
            ATFQ+ MND+ R +LRKFVLVFFDDIL+Y+KS  EH   L +VL+ L  H+L AN +KCQ
Sbjct: 700  ATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLYANKRKCQ 759

Query: 219  FAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSI 278
            F    IEYLGH+I+++GV+AD +KI AM           L+GFLGLTGYYRKFV  YGSI
Sbjct: 760  FGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKFVRGYGSI 819

Query: 279  ALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL-- 338
            A PLT LL+K +F+W+  A  AF  LK AM++VPVL + DF      +       LG   
Sbjct: 820  AKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASGTGLGAVL 879

Query: 339  -----------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLL 398
                       QAL D  + K+VYERELMAIV A+QKW  YLLG+ FVVRTD+KSLKFLL
Sbjct: 880  MQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLL 939

Query: 399  EQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIF 458
            EQR I  EYQ+W+TK+LG+DF I+YK G+ENKAA+ALSR   + +L  +S+ + +     
Sbjct: 940  EQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPAAIQLEDI 999

Query: 459  IDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSP 518
              +V  +  L  I+  ++    +  G+++ +  L   G+LV+   S  + L+L EFH S 
Sbjct: 1000 SSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELILKEFHGSK 1059

Query: 519  IGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRV 578
            IGGH G L T +R+    YW GM   IRTYVAEC VCQ+ KY +L PAGLLQ LPIP +V
Sbjct: 1060 IGGHGGVLKTQKRITAVFYWEGMLNTIRTYVAECQVCQRHKYSTLAPAGLLQPLPIPTQV 1119

Query: 579  WEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGC 638
            W DISMDF EGLPK E +DVI+VVVDRL+KY+HFI L HPFGA  VA VF+ EI+ LHG 
Sbjct: 1120 WADISMDFFEGLPKFEGFDVIMVVVDRLTKYSHFISLAHPFGAPQVAMVFILEIVRLHGF 1179

Query: 639  PRSIVSDRD-----------------------------HGQTEVVNRGVETYLRCFAMNT 698
            P ++VSDRD                              GQTEV NRG+ETYLRCFA + 
Sbjct: 1180 PETLVSDRDTLFTGLFWTELFRLAGTKLCFSTAYHPQSDGQTEVTNRGLETYLRCFASDK 1239

Query: 699  PKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERD 720
            PK W ++L WAE SYN++ H++I M+PF+A YGR PP +L     S+    +++ + ERD
Sbjct: 1240 PKSWVRFLPWAEFSYNSSYHSSIKMSPFQALYGREPPVLLKFENGSTVNATLENRLSERD 1299

[Close]

BLAST of CSPI03G21010 vs. TrEMBL
Match: J3SDF5_BETVU (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.1e-197
Identity = 359/694 (51.73%), Postives = 456/694 (65.71%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  T+PDKYPIPV+DELLDEL GAT+FSK+DL++GYHQI VR  D HKTA RTHEGHYE
Sbjct: 750  LNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYE 809

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MN++ RP+LR+FVLVF DDILIY++S EEH+  L +VL  L 
Sbjct: 810  FLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLA 869

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H L  N KKC+F    + YLGH+IS  GVA D  K+ A+          EL+GFLGLTG
Sbjct: 870  QHALFVNKKKCEFGKREVAYLGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTG 929

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFVANY  IA PLT+ LKK  F+W+ TA  AF+QLK AM+S PVL +P+F      +
Sbjct: 930  YYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVE 989

Query: 319  LMFQVLILGLQALPDTH-------------RFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   +G   + D               + K+VYE+ELMAI  AVQKW  YLLG+ FV
Sbjct: 990  TDASGYGMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFV 1049

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSR-LPPVFELG 438
            VRTD++SL+++ +QR IG E+Q+W++KL+GYDF I YK G+ N+ A+ALSR      ELG
Sbjct: 1050 VRTDQQSLRYITQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELG 1109

Query: 439  LISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSP 498
             I  V G+  +    ++ G+  L  +R  L  G+ TP  ++L    L + GR V+   S 
Sbjct: 1110 AIVAVQGVEWAELRREITGDSFLTQVRKELQEGR-TPSHFTLVDGNLLFKGRYVIPSSST 1169

Query: 499  TIPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTP 558
             IP LL E+H++P+GGH G L TY RLA E YWRGM+  +  YV +C +CQQ K     P
Sbjct: 1170 IIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHP 1229

Query: 559  AGLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVA 618
             GLLQ LPIP  VWEDISMDFIEGLP S+  D ILV+VDRLSKYAHF+ L+HPF A +VA
Sbjct: 1230 RGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVA 1289

Query: 619  AVFMREIIHLHGCPRSIVSDRDH-----------------------------GQTEVVNR 678
             +F++E++ LHG P SIVSDRD                              GQTE+VNR
Sbjct: 1290 DLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNR 1349

Query: 679  GVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESS 720
             +ETYLRCF    P+ WAKWL WAE SYNT+ HT+  M+PF+  YGR PP ++   K  +
Sbjct: 1350 ALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQT 1409

[Close]

BLAST of CSPI03G21010 vs. TrEMBL
Match: A0A087HNF3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G155400 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 9.4e-194
Identity = 369/735 (50.20%), Postives = 480/735 (65.31%), Query Frame = 1


Query: 39   KLEVQR---ILLSFGSVFESRNQLTPPR---NHDPGARAVNVRPYPLNLGTIPDKYPIPV 98
            K E++R    +L  G V +SR+  + P        G+    V    LN  T+ D YPIP+
Sbjct: 592  KEEIERQVASMLGAGIVRDSRSPFSSPVLLVKKKDGSWRFCVDYRALNKATVSDSYPIPM 651

Query: 99   VDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAPAT 158
            +D+LLDEL GA IFSK+DL+SGYHQI V+  DV KTA RTH+GHYEFLVMPFGLKNAPAT
Sbjct: 652  IDQLLDELHGANIFSKLDLRSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLKNAPAT 711

Query: 159  FQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQFA 218
            FQ+ MND+ RP+LR+FVLVFFDDIL+Y+ +LEEH + L +VL+ L  +KL AN KKCQF 
Sbjct: 712  FQALMNDLFRPHLRRFVLVFFDDILVYSSNLEEHKEHLTMVLQILQNNKLFANPKKCQFG 771

Query: 219  VDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSIAL 278
               IEYLGHIIS  GV+AD  KI AM           L+GFLGLTGYYRKFV+ YG  A 
Sbjct: 772  SSEIEYLGHIISGQGVSADQEKIKAMIEWPEPRNVKALRGFLGLTGYYRKFVSRYGEKAK 831

Query: 279  PLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL---- 338
            PLT LLKK +F+W + A  AF  LK AM SV VL + DF ++   +       LG     
Sbjct: 832  PLTTLLKKDQFKWGKEAAVAFTTLKEAMTSVSVLALADFNELFVVESDASGTGLGAVLMQ 891

Query: 339  ---------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLLEQ 398
                     QAL +  R K+VYERELMAIV A+QKW  YLLG+ F+VRTD+KSLKFL EQ
Sbjct: 892  KQKPLAFFSQALTERQRMKSVYERELMAIVFAIQKWRHYLLGRRFLVRTDQKSLKFLFEQ 951

Query: 399  RAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIFID 458
            R I  EYQ+W+TK+LG++F I+YK G+EN+AA+ALSR   V  L  +S+ + L  +    
Sbjct: 952  REINLEYQKWLTKILGFNFEIQYKPGLENRAADALSRKEAVPLLFALSIPAVLQLNEIES 1011

Query: 459  QVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSPIG 518
             V  +  L  I+   +    +   Y++ +  L + GRLV+   S  I ++L EFH+  +G
Sbjct: 1012 AVDQDPVLKKIKDDWLQDPSSQPDYTVVQGRLLWKGRLVIPTGSAWIEVILKEFHDGKVG 1071

Query: 519  GHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWE 578
            GH G L T +R++   +W+GM   IR YVA C VCQ+ KY +L PAGLLQ LPIP+ VWE
Sbjct: 1072 GHGGVLKTQRRISALFFWKGMLGKIREYVAACHVCQRHKYSTLAPAGLLQPLPIPEAVWE 1131

Query: 579  DISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPR 638
            DISMDFIEGLPKS   ++I+VVVDRL+KY HF+ LKHP  A  VA+VF++EI+ LHG P+
Sbjct: 1132 DISMDFIEGLPKSAGMELIMVVVDRLTKYGHFVGLKHPLDATTVASVFIQEIVRLHGFPK 1191

Query: 639  SIVSDRDH-----------------------------GQTEVVNRGVETYLRCFAMNTPK 698
            ++VSDRD                              GQ+EV NRG+ETY RCF  + P+
Sbjct: 1192 TLVSDRDRLFTGKFWGEMFKLVGTKLCFSTAYHPQSDGQSEVTNRGLETYPRCFTSDKPQ 1251

Query: 699  QWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERDGI 716
             WA++L WAELSYNT+ H++I MTPF+A YGR PP++      S+ V +++  ++ERD +
Sbjct: 1252 TWAQFLPWAELSYNTSYHSSIHMTPFQAVYGREPPALRRYENGSTHVADLETKLQERDSM 1311

[Close]

BLAST of CSPI03G21010 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-26
Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 1


Query: 187 LQQLVVVLETLVVHKLVANFKKCQFAVDRIEYLGH--IISSDGVAADPTKIMAM------ 246
           +  L +VL+    H+  AN KKC F   +I YLGH  IIS +GV+ADP K+ AM      
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 247 ----ELQGFLGLTGYYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVP 301
               EL+GFLGLTGYYR+FV NYG I  PLT+LLKK   +W E A  AF+ LK A+ ++P
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

[Close]

BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674235545|gb|KFK28310.1| (hypothetical protein AALP_AA8G499800 [Arabis alpina])

HSP 1 Score: 724.5 bits (1869), Expect = 2.0e-205
Identity = 375/689 (54.43%), Postives = 478/689 (69.38%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GAT+FSK+DLKSGYHQI V+  +V KTA RTH+GHYE
Sbjct: 675  LNKVTIPDSFPIPMIDQLLDELHGATVFSKLDLKSGYHQILVKPQNVPKTAFRTHDGHYE 734

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAP TFQ+ MN++ R +LRKFVLVFFDDIL+Y+ SL+EH + L VVL+ L 
Sbjct: 735  FLVMPFGLTNAPTTFQALMNEVFRAHLRKFVLVFFDDILVYSSSLQEHQEHLRVVLQILF 794

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
              +L AN KKCQF    IEYLGH+IS +GV+ADP+K+ AM           L+GFLGLTG
Sbjct: 795  QQQLFANKKKCQFGSSSIEYLGHVISGEGVSADPSKLQAMVSWPLPKNIKALRGFLGLTG 854

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYR+FV  YGSIA PLT LLKK KFQW+E A  AF++LK AM +VPVL + DF ++   +
Sbjct: 855  YYRRFVQGYGSIAKPLTSLLKKDKFQWSEEATVAFEKLKVAMSTVPVLALVDFSELFVVE 914

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                 + LG              QAL D  + K+VYERELMAIV A+QKW  YLLG+ F+
Sbjct: 915  SDASGIGLGAVLLQKQKPVAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFL 974

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR +  EYQ+W+TK+LG++F I YK G+ENKAA+ALSR+  + +L  
Sbjct: 975  VRTDQKSLKFLLEQREVNLEYQQWLTKILGFNFDIHYKPGLENKAADALSRVEGLPQLYA 1034

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +SV + +      ++V  N     I+  ++    T  GYS+ +  L Y+G+LVL ++S  
Sbjct: 1035 LSVPAAIQLEEINEEVDRNPVSKKIKEEVLLDASTHSGYSVVQGRLLYNGKLVLPKESYL 1094

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            I +LL EFHNS +GGH G L T + L    YW+GM A I+T+VAEC VCQ+ KY +L P+
Sbjct: 1095 IKVLLHEFHNSRMGGHGGVLKTQRHLGALFYWQGMMADIKTFVAECVVCQKHKYSTLAPS 1154

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIP +VWEDIS+DF+EGLPKSE +D ILVVVDRL+KYAHFI L+HPFGAK +AA
Sbjct: 1155 GLLQPLPIPTQVWEDISLDFVEGLPKSEGFDAILVVVDRLTKYAHFIKLQHPFGAKEIAA 1214

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            VF++EI+ LHG P ++VSDRD                              GQTEV NRG
Sbjct: 1215 VFIQEIVRLHGYPSTMVSDRDTLFTGMFWTELFRLAGTSLNFSTAYHPQTDGQTEVTNRG 1274

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 716
            +ET LRCF  + PK+WA +L WAE  YN++ H+AI MTPF+A YGR PPS+L     S+ 
Sbjct: 1275 LETILRCFTSDKPKKWAAYLPWAEFCYNSSYHSAIQMTPFKALYGRDPPSLLRFEDGSTT 1334

[Close]

BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674230743|gb|KFK24528.1| (hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina])

HSP 1 Score: 710.7 bits (1833), Expect = 3.0e-201
Identity = 367/693 (52.96%), Postives = 468/693 (67.53%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  TIPD +PIP++D+LLDEL GATIFSK+DLKSGYHQI V+  DV KTA RTH+GHYE
Sbjct: 701  LNKVTIPDSFPIPMIDQLLDELHGATIFSKLDLKSGYHQILVKAEDVAKTAFRTHDGHYE 760

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MND+ R YLRKFVLVFFDDIL+Y+KSL+EH Q L +VLE L 
Sbjct: 761  FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQEHQQHLGLVLELLQ 820

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H+L AN KKC+F    +EYLGH++S  GVAADP KI AM           L+GFLGLTG
Sbjct: 821  QHQLFANKKKCEFGRTELEYLGHVVSGKGVAADPEKIQAMVSWPEPQNVKALRGFLGLTG 880

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFV  YG IA PLT LLKK +FQW   A  AFQ+LK AM +VPVL + DF +    +
Sbjct: 881  YYRKFVQRYGEIARPLTALLKKDQFQWTAEATVAFQKLKKAMSTVPVLALVDFTEQFVVE 940

Query: 319  LMFQVLILGL-------------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   LG              QAL +  R K+VYERELMAIV A+QKW  YLLG+ FV
Sbjct: 941  SDASGTGLGAVLMQSQRPLAYFSQALTERQRLKSVYERELMAIVFAIQKWRHYLLGRKFV 1000

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGL 438
            VRTD+KSLKFLLEQR I  EYQ+W+TKLLG+DF I+YK G+ENKAA+ALSR     +L  
Sbjct: 1001 VRTDQKSLKFLLEQREINMEYQKWLTKLLGFDFEIQYKPGLENKAADALSRKDMALQLCA 1060

Query: 439  ISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPT 498
            +S+ + +       +V  +  L  ++  ++    +   +S+ +  L   G+LV+   S  
Sbjct: 1061 LSIPAAIQLEQINTEVDNDPDLRKLKEEVLQDAASHSEFSVVQGRLLRKGKLVVPAQSRL 1120

Query: 499  IPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPA 558
            + ++L EFHN  +GGH G L T +R+    YW+GM + IR +VA C VCQ+ KY +L PA
Sbjct: 1121 VNVILQEFHNGKLGGHGGVLKTQKRVEAIFYWKGMMSRIREFVAACQVCQRHKYSTLAPA 1180

Query: 559  GLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAA 618
            GLLQ LPIPD+VWEDISMDF+EGLPKSE ++V++VVVDRL+KYAHFI +KHP  A  VA 
Sbjct: 1181 GLLQPLPIPDQVWEDISMDFVEGLPKSEGFEVVMVVVDRLTKYAHFISMKHPVTAVEVAL 1240

Query: 619  VFMREIIHLHGCPRSIVSDRD-----------------------------HGQTEVVNRG 678
            +F +E++ LHG P++IVSDRD                              GQTEV NRG
Sbjct: 1241 IFTKEVVKLHGFPKTIVSDRDPLFTGRFWTEMFRLAGTSLCFSTAYHPQSDGQTEVTNRG 1300

Query: 679  VETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSP 720
            +ET LRCF+ + P+ W ++L WAEL YNT+ HTAI M+PF+A YGR PP+++     S+ 
Sbjct: 1301 METLLRCFSSDKPRCWVQFLHWAELCYNTSYHTAIKMSPFQAVYGREPPTLIKFETGSTS 1360

[Close]

BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674245622|gb|KFK38387.1| (hypothetical protein AALP_AA3G106900 [Arabis alpina])

HSP 1 Score: 701.4 bits (1809), Expect = 1.8e-198
Identity = 375/741 (50.61%), Postives = 484/741 (65.32%), Query Frame = 1


Query: 39   KLEVQR---ILLSFGSVFESRNQLTPP----RNHDPGAR-AVNVRPYPLNLGTIPDKYPI 98
            K E+++   ++L+ G + ES +  + P    R  D   R  V+ R   LN  T+ D YPI
Sbjct: 580  KAEIEKQVAVMLAAGIIRESTSPYSSPVLLVRKKDGSWRFCVDYRA--LNKATVGDSYPI 639

Query: 99   PVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAP 158
            P++D+LLDEL GA +FSK+DL+SGYHQIRVR  DV KTA RTH+GHYEFLVMPFGL NAP
Sbjct: 640  PMIDQLLDELHGACVFSKLDLRSGYHQIRVRAEDVPKTAFRTHDGHYEFLVMPFGLTNAP 699

Query: 159  ATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQ 218
            ATFQ+ MND+ R +LRKFVLVFFDDIL+Y+KS  EH   L +VL+ L  H+L AN +KCQ
Sbjct: 700  ATFQALMNDVFRQHLRKFVLVFFDDILVYSKSASEHRNHLQLVLQLLQDHQLYANKRKCQ 759

Query: 219  FAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSI 278
            F    IEYLGH+I+++GV+AD +KI AM           L+GFLGLTGYYRKFV  YGSI
Sbjct: 760  FGSRSIEYLGHVITAEGVSADASKIQAMVDWPEPRNVKALRGFLGLTGYYRKFVRGYGSI 819

Query: 279  ALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL-- 338
            A PLT LL+K +F+W+  A  AF  LK AM++VPVL + DF      +       LG   
Sbjct: 820  AKPLTSLLQKDQFRWSPEASTAFNNLKQAMVTVPVLTMADFDAQFVVESDASGTGLGAVL 879

Query: 339  -----------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLL 398
                       QAL D  + K+VYERELMAIV A+QKW  YLLG+ FVVRTD+KSLKFLL
Sbjct: 880  MQHQKPLAYFSQALTDRQKLKSVYERELMAIVFAIQKWRHYLLGRKFVVRTDQKSLKFLL 939

Query: 399  EQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIF 458
            EQR I  EYQ+W+TK+LG+DF I+YK G+ENKAA+ALSR   + +L  +S+ + +     
Sbjct: 940  EQRQINMEYQKWLTKILGFDFNIQYKSGLENKAADALSRRDAIPQLFALSIPAAIQLEDI 999

Query: 459  IDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSP 518
              +V  +  L  I+  ++    +  G+++ +  L   G+LV+   S  + L+L EFH S 
Sbjct: 1000 SSEVDKDLKLQKIKAEVLADPKSHAGFTVVQGRLLRQGKLVVPAQSHLVELILKEFHGSK 1059

Query: 519  IGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRV 578
            IGGH G L T +R+    YW GM   IRTYVAEC VCQ+ KY +L PAGLLQ LPIP +V
Sbjct: 1060 IGGHGGVLKTQKRITAVFYWEGMLNTIRTYVAECQVCQRHKYSTLAPAGLLQPLPIPTQV 1119

Query: 579  WEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGC 638
            W DISMDF EGLPK E +DVI+VVVDRL+KY+HFI L HPFGA  VA VF+ EI+ LHG 
Sbjct: 1120 WADISMDFFEGLPKFEGFDVIMVVVDRLTKYSHFISLAHPFGAPQVAMVFILEIVRLHGF 1179

Query: 639  PRSIVSDRD-----------------------------HGQTEVVNRGVETYLRCFAMNT 698
            P ++VSDRD                              GQTEV NRG+ETYLRCFA + 
Sbjct: 1180 PETLVSDRDTLFTGLFWTELFRLAGTKLCFSTAYHPQSDGQTEVTNRGLETYLRCFASDK 1239

Query: 699  PKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERD 720
            PK W ++L WAE SYN++ H++I M+PF+A YGR PP +L     S+    +++ + ERD
Sbjct: 1240 PKSWVRFLPWAEFSYNSSYHSSIKMSPFQALYGREPPVLLKFENGSTVNATLENRLSERD 1299

[Close]

BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|387965727|gb|AFK13856.1| (Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 698.4 bits (1801), Expect = 1.5e-197
Identity = 359/694 (51.73%), Postives = 456/694 (65.71%), Query Frame = 1


Query: 79   LNLGTIPDKYPIPVVDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYE 138
            LN  T+PDKYPIPV+DELLDEL GAT+FSK+DL++GYHQI VR  D HKTA RTHEGHYE
Sbjct: 750  LNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYE 809

Query: 139  FLVMPFGLKNAPATFQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLV 198
            FLVMPFGL NAPATFQS MN++ RP+LR+FVLVF DDILIY++S EEH+  L +VL  L 
Sbjct: 810  FLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLA 869

Query: 199  VHKLVANFKKCQFAVDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTG 258
             H L  N KKC+F    + YLGH+IS  GVA D  K+ A+          EL+GFLGLTG
Sbjct: 870  QHALFVNKKKCEFGKREVAYLGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTG 929

Query: 259  YYRKFVANYGSIALPLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWK 318
            YYRKFVANY  IA PLT+ LKK  F+W+ TA  AF+QLK AM+S PVL +P+F      +
Sbjct: 930  YYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVE 989

Query: 319  LMFQVLILGLQALPDTH-------------RFKAVYERELMAIVRAVQKWCPYLLGKPFV 378
                   +G   + D               + K+VYE+ELMAI  AVQKW  YLLG+ FV
Sbjct: 990  TDASGYGMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFV 1049

Query: 379  VRTDKKSLKFLLEQRAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSR-LPPVFELG 438
            VRTD++SL+++ +QR IG E+Q+W++KL+GYDF I YK G+ N+ A+ALSR      ELG
Sbjct: 1050 VRTDQQSLRYITQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELG 1109

Query: 439  LISVVSGLNPSIFIDQVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSP 498
             I  V G+  +    ++ G+  L  +R  L  G+ TP  ++L    L + GR V+   S 
Sbjct: 1110 AIVAVQGVEWAELRREITGDSFLTQVRKELQEGR-TPSHFTLVDGNLLFKGRYVIPSSST 1169

Query: 499  TIPLLLAEFHNSPIGGHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTP 558
             IP LL E+H++P+GGH G L TY RLA E YWRGM+  +  YV +C +CQQ K     P
Sbjct: 1170 IIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHP 1229

Query: 559  AGLLQALPIPDRVWEDISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVA 618
             GLLQ LPIP  VWEDISMDFIEGLP S+  D ILV+VDRLSKYAHF+ L+HPF A +VA
Sbjct: 1230 RGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVA 1289

Query: 619  AVFMREIIHLHGCPRSIVSDRDH-----------------------------GQTEVVNR 678
             +F++E++ LHG P SIVSDRD                              GQTE+VNR
Sbjct: 1290 DLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNR 1349

Query: 679  GVETYLRCFAMNTPKQWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESS 720
             +ETYLRCF    P+ WAKWL WAE SYNT+ HT+  M+PF+  YGR PP ++   K  +
Sbjct: 1350 ALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQT 1409

[Close]

BLAST of CSPI03G21010 vs. NCBI nr
Match: gi|674250890|gb|KFK43655.1| (hypothetical protein AALP_AA1G155400 [Arabis alpina])

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 369/735 (50.20%), Postives = 480/735 (65.31%), Query Frame = 1


Query: 39   KLEVQR---ILLSFGSVFESRNQLTPPR---NHDPGARAVNVRPYPLNLGTIPDKYPIPV 98
            K E++R    +L  G V +SR+  + P        G+    V    LN  T+ D YPIP+
Sbjct: 592  KEEIERQVASMLGAGIVRDSRSPFSSPVLLVKKKDGSWRFCVDYRALNKATVSDSYPIPM 651

Query: 99   VDELLDELFGATIFSKIDLKSGYHQIRVRVADVHKTALRTHEGHYEFLVMPFGLKNAPAT 158
            +D+LLDEL GA IFSK+DL+SGYHQI V+  DV KTA RTH+GHYEFLVMPFGLKNAPAT
Sbjct: 652  IDQLLDELHGANIFSKLDLRSGYHQILVKAEDVAKTAFRTHDGHYEFLVMPFGLKNAPAT 711

Query: 159  FQSGMNDILRPYLRKFVLVFFDDILIYNKSLEEHLQQLVVVLETLVVHKLVANFKKCQFA 218
            FQ+ MND+ RP+LR+FVLVFFDDIL+Y+ +LEEH + L +VL+ L  +KL AN KKCQF 
Sbjct: 712  FQALMNDLFRPHLRRFVLVFFDDILVYSSNLEEHKEHLTMVLQILQNNKLFANPKKCQFG 771

Query: 219  VDRIEYLGHIISSDGVAADPTKIMAM----------ELQGFLGLTGYYRKFVANYGSIAL 278
               IEYLGHIIS  GV+AD  KI AM           L+GFLGLTGYYRKFV+ YG  A 
Sbjct: 772  SSEIEYLGHIISGQGVSADQEKIKAMIEWPEPRNVKALRGFLGLTGYYRKFVSRYGEKAK 831

Query: 279  PLTQLLKKGKFQWNETAKNAFQQLKFAMMSVPVLGIPDFPKVLCWKLMFQVLILGL---- 338
            PLT LLKK +F+W + A  AF  LK AM SV VL + DF ++   +       LG     
Sbjct: 832  PLTTLLKKDQFKWGKEAAVAFTTLKEAMTSVSVLALADFNELFVVESDASGTGLGAVLMQ 891

Query: 339  ---------QALPDTHRFKAVYERELMAIVRAVQKWCPYLLGKPFVVRTDKKSLKFLLEQ 398
                     QAL +  R K+VYERELMAIV A+QKW  YLLG+ F+VRTD+KSLKFL EQ
Sbjct: 892  KQKPLAFFSQALTERQRMKSVYERELMAIVFAIQKWRHYLLGRRFLVRTDQKSLKFLFEQ 951

Query: 399  RAIGGEYQRWITKLLGYDFVIEYKKGMENKAANALSRLPPVFELGLISVVSGLNPSIFID 458
            R I  EYQ+W+TK+LG++F I+YK G+EN+AA+ALSR   V  L  +S+ + L  +    
Sbjct: 952  REINLEYQKWLTKILGFNFEIQYKPGLENRAADALSRKEAVPLLFALSIPAVLQLNEIES 1011

Query: 459  QVAGNEALNSIRLSLINGQPTPEGYSLHREVLCYHGRLVLSEDSPTIPLLLAEFHNSPIG 518
             V  +  L  I+   +    +   Y++ +  L + GRLV+   S  I ++L EFH+  +G
Sbjct: 1012 AVDQDPVLKKIKDDWLQDPSSQPDYTVVQGRLLWKGRLVIPTGSAWIEVILKEFHDGKVG 1071

Query: 519  GHHGALTTYQRLAREVYWRGMKAHIRTYVAECSVCQQAKYLSLTPAGLLQALPIPDRVWE 578
            GH G L T +R++   +W+GM   IR YVA C VCQ+ KY +L PAGLLQ LPIP+ VWE
Sbjct: 1072 GHGGVLKTQRRISALFFWKGMLGKIREYVAACHVCQRHKYSTLAPAGLLQPLPIPEAVWE 1131

Query: 579  DISMDFIEGLPKSECYDVILVVVDRLSKYAHFIPLKHPFGAKVVAAVFMREIIHLHGCPR 638
            DISMDFIEGLPKS   ++I+VVVDRL+KY HF+ LKHP  A  VA+VF++EI+ LHG P+
Sbjct: 1132 DISMDFIEGLPKSAGMELIMVVVDRLTKYGHFVGLKHPLDATTVASVFIQEIVRLHGFPK 1191

Query: 639  SIVSDRDH-----------------------------GQTEVVNRGVETYLRCFAMNTPK 698
            ++VSDRD                              GQ+EV NRG+ETY RCF  + P+
Sbjct: 1192 TLVSDRDRLFTGKFWGEMFKLVGTKLCFSTAYHPQSDGQSEVTNRGLETYPRCFTSDKPQ 1251

Query: 699  QWAKWLAWAELSYNTTVHTAILMTPFEAHYGRPPPSILPCVKESSPVNEVDHLMKERDGI 716
             WA++L WAELSYNT+ H++I MTPF+A YGR PP++      S+ V +++  ++ERD +
Sbjct: 1252 TWAQFLPWAELSYNTSYHSSIHMTPFQAVYGREPPALRRYENGSTHVADLETKLQERDSM 1311

The following BLAST results are available for this feature:

BLAST of CSPI03G21010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF22_SCHPO	2.5e-86	30.64	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF212_SCHPO	2.5e-86	30.64	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF23_SCHPO	2.5e-86	30.64	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF24_SCHPO	2.5e-86	30.64	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF25_SCHPO	2.5e-86	30.64	Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI03G21010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A087GEK8_ARAAL	1.4e-205	54.43	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1	[more]
A0A087G3S6_ARAAL	2.1e-201	52.96	Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs46225U000100 PE=4...	[more]
A0A087H8D5_ARAAL	1.3e-198	50.61	Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G106900 PE=4 SV=1	[more]
J3SDF5_BETVU	1.1e-197	51.73	Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1	[more]
A0A087HNF3_ARAAL	9.4e-194	50.20	Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G155400 PE=4 SV=1	[more]

BLAST of CSPI03G21010 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00860.1	1.0e-26	50.79	ATMG00860.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of CSPI03G21010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|674235545\|gb\|KFK28310.1\|	2.0e-205	54.43	hypothetical protein AALP_AA8G499800 [Arabis alpina]	[more]
gi\|674230743\|gb\|KFK24528.1\|	3.0e-201	52.96	hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina]	[more]
gi\|674245622\|gb\|KFK38387.1\|	1.8e-198	50.61	hypothetical protein AALP_AA3G106900 [Arabis alpina]	[more]
gi\|387965727\|gb\|AFK13856.1\|	1.5e-197	51.73	Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]	[more]
gi\|674250890\|gb\|KFK43655.1\|	1.4e-193	50.20	hypothetical protein AALP_AA1G155400 [Arabis alpina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21010.1	CSPI03G21010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 97..223 score: 1.3
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 1..223 score: 11
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 538..632 score:
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 551..674 score: 1.6
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 541..670 score: 2.09
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 79..143 score: 7.3
None	No IPR available	GENE3D	G3DSA:3.30.70.270		coord: 144..226 score: 2.3
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 79..786 score: 7.8E
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 79..786 score: 7.8E
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 65..393 score: 2.78E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G21010	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G21010	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G21010	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G21010	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G21010	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G21010	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G21010	Watermelon (Charleston Gray)	cpiwcgB230
CSPI03G21010	Watermelon (97103) v1	cpiwmB236
CSPI03G21010	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G21010	Bottle gourd (USVL1VR-Ls)	cpilsiB203
CSPI03G21010	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G21010	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G21010	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G21010	Silver-seed gourd	carcpiB0519
CSPI03G21010	Silver-seed gourd	carcpiB0520
CSPI03G21010	Silver-seed gourd	carcpiB0798
CSPI03G21010	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G21010	Watermelon (97103) v2	cpiwmbB213
CSPI03G21010	Watermelon (97103) v2	cpiwmbB224
CSPI03G21010	Wax gourd	cpiwgoB271
CSPI03G21010	Wax gourd	cpiwgoB303