CSPI02G06820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G06820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Prefoldin subunit, putative
Location	Chr2 : 5602955 .. 5607135 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTATTAAAATATCATAATTAAGTAAAAACTAAACGCAAGACTAACTCAGCAAAGTGATATTTTTCCAAAAAAGAAAAAGGAAAAGAAGACCGACCGGATCCATCGCAGTTACATCAGACCTTAGACCGCGCACCAAATCGTATTGGTAATAACCATCGTTTACGCGAGCTCCGATCTCCGAAATGGCGGACGAGGTGAACAGAGCTGTGAGTACTTTTACTATTTTAATCTTGCTTTTCCTCTCACAACTCATATGTTTCCGATGCATTAGCCTTTGGTTTTCTTTTCTCCAATCAGACTTTCTTGGAAATTCAAGGTCGCATGATTGAAATTACTGGAAAGCTGAAGCAGGTAAATTCCCTTTCGTTTATTGGACTATCTGGGATTTTTTTAGTTTAATCTTTTGCGCCTATAGGAGTGAAAGGTTTTTGTAATTCTTGTCTGGATTGGTCTTACTTCCAGCTTTCGTGCTGATGATTGGAATGCTTACTCTTTTTCTCAGTATTTAGTAAGGACACCTTCGAATCTAGGTTAATATTGTAAGTGGTACAATTACAAAAGTTCATAAAAGCATTCTAGAAAATAAAAATCATTTGAAAAATCTATCGCATTTCTTTCCTGTATAGCTGTCCAAGGAGAGTTAATATCATCATTTGGGTTATGCTTTTTGGGTCTCTTAATTGTAAAAAAGACTCTTCTAAGGAATTTTTCAAATCATTCACTTTTTCCCTCAATTTTCCCTCTATGCATGAATTACTAAAACCATTATCGCGACTTCCATATGCTCATGTTTTCTTTTCTTTGTTTAGTGTGAATGTTCTTTTGATTAACTAGATCCAAAACAGTAGGATGAGTAGGGAAAAGAAAAAATGAGCACATGGAAGTCGCGGAGATGGTTTTGGTAGTTAATGAGACTAAAAGAGTTTGGAAGATAAAGATGAAGATTATTACTCTGACTTCTTTAGGTCCTCTTTTTGAGGAACTGTTTCAATCTAGGGGCTTTTTTTTGATAACTTCTTTATTCATGATGAACAATTTTACTTGCTATGACCTCCATTTCTATAGCAATGTCATCACAAAGCATTCTAGTTTCAAGTTCACTATCATCTACTCTCTCAACCCCACTACTACTAACACATCTTTCTCCATTAATAAGTGGTTCAAAGTATTGGTAAGATTACAATCATGTAATTCCTTGCTATCTAATGACTTTCTAGGTTAAACATGACTCTCATGCATAGGTGCAACATGCGCTTCTTTTAACTACTTTCTACCTTAACAATGTATGGTAGGTTAAGTAAGAATTTCTAGTAATAGTTGGCATTGAAACTAGACTTAGATTTAGTGTACCTTGAAGATCTCCATACCTTTCTATCTTGATGGCACCACAAATCCTCACAAGGTCATTTTTTTTTTTTTCAATTAGCAAACATCTCGACAATCTTCTCATCAAGTTCTTTGTAGAATCGGTCCGTGGTAGCTTCCTCATGCTCATAATTTGCAATTTTCTACACTTTTGCTCTCTTGTTTCAAATTTTGCAATTTATGGACTCGTTAGAAGCTTTTGATATCTTTCTGCGAAGGTAGTGCATGCTTTTCCACTTCTCATGAGAAGCATATTTCTCAAATGTAGACTATAAGTTCTACCTTTTCACCATATGAAATCCATATCCCTTGTGAATTGGAAACAAAAACCCTTTTTGGGTATGTTAACTCTCAATTCTCAAACACCAAGACCCTCAATTGATCCGTTTTTAACCTTAAGGATCGAGTTAGACATGAATTGCCTTGTGAAGCAAGTTCACGAGACAGAACAAGGTCCTTAATCTGGGGTTCAAGCACTCCACAAGATAGGATGATCAATCCTGCTCACTACTCAAACAACAAGATAGGATAACCAATCATGCTTAAATGTTCTTGGCATGCAACTCAACACTTAAATTGCAAAATTCAAAAAGCTATCTTGGTTGAACTTGAAAGAAAAAGCACCAAAGCTAAAACTCAATTGATATGATCGTGATCTTCTCAAAATGACTTAAACAGTCTTCCATTAAAATGCATCATAGATCATAGATCATAGCAAAATGACAATACCCTACTTATTGGAAAATAATAAAATTACATTCAAATTATTAAAAGAAAATTATAAATAGTAATTTGATGTCACAGTTTATATCGGAATTTCAGGAACATAACATGGCATAGTGTCTAAGGCAAGTCTTAAACGCTCAAGATTAAGTTCCAGATGCACTGATGCAGTTTCTGTCTTTTGTGCATTACAAATTAGTTCTTTGTCAGTCTTCTACGTCACTTTATCTGAACAGAGAAATTTTTGACTTTATGAGTTAAAACTGGTCTTTTCCTTTCTTTACAGTTGCAAACCCAGATACGAAACAAGGAGGGAGAGAAGAAGCGCGCTTTTTTGACCTTGGAGGAACTTAAACAGTTGGCTGAAGACACTAATACATACAAATCTATAGGTACTTATCAAAGCTTTATTTTTAACCGGAAGCTTGTTCATCCTTAGTCTAAATCATGATTCTGGCAGAACGTGTAGTAGTAAAACCTTGTTAGATTCACTTTACTTATCACTGATTTCCTTTCATCATTTTTTGTGGTGCAGGGAGAACGTGAGTTATGTTGCAATTAAGTGATCGACTTAAAGTTTAGATCTTTCATTTCCCATACTGTACAGATGAAATCCTCTTACTTTGTGTTGCTTCGTCCTGACCAGGTTTGTTTTAGAGTCAAAGTCAGTTCTAATGAATGAGCAGGAGCAAAAGTTCAAAGATAGTGAAACTGCAATTGCCTCGCTCCAGGTACATATTAAAATTAGTTTCCTCTGCAGAGACGGGACATCTACTTTTTTATTCCCAATTGTGTATACATGTCATTAACGTTGTCTCTTTTTTAAGATTTAGTTGCATTTGACCTCACTAAATAACATGTTCTTGCCCTTCCTAGTTGTATATTTTCTTGCCTTCACTAATTCTGACTTCAGTACATACGTTTAAATTTATCCACACATGCACATAGGCTATTTTCTTCGATCATTTCTTGGGATTTCCACACATTTATCTCGATTGAGTCAATTTGACATTTTTCCACTCTTTTTTGTGTGAATGAATTTCAAACTCTAGCCCTCCAAATAAAGTTTGCTGAAGAGTTTGAATGTTGGATGCCAGCGATATTATTTTTATTCTTGGCATTTTACTAAAGAAACTGTTAAATCTCCAATTCCTCATACATATAAAAGGAGGGCCAAGAAGGGAAATGCACCCGATGATATGAGTTCGGGTGAGGCCAATGGAGAGGATGGAAATACCTGAGGGTTCCACCTGGTTGACAATATAAATAAAGAATGTTTTGGGGATCAATATTTTTAGGTTTTATTTGTTAAAAAGCTGCTGTGAGCTTTAAGGACAGAGGATTCCAGTTTTCGGAAGGAGCTGATTATTTCTTTATTTGTTTGTTCTTGCCTTCCATTTGTGTTCTTTTTTAGATTCTATTTTGGCTTTTTGAACTGGTGATATTATTGCAATATATATTAAGCAGAGTATTGTCTCTGTTTTAGCCATGCTCAGGTTAAGGGAGTCTTAACACAAACTTATTCCTCTGTTTTTACCTCTTCTTTCCCTTTTATCTCAAATTACTTGTGTAAGTAACAATATAACTGGTGGAAGTGTCCTTGAGATTTGGAATGCAGTGTACTTTCAATGTTTCCCTTTGAACTTTCTTAGAGGTATTCTTATATGTATATATAATGATATTCTTGTTTTATCTTGGACAAACGTCATGAAAGATGGTTTTGTTGAACATATGCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCTATGTCTGTAGCATAGGGCAGGCTGGGTCTTCCCCCCTCTTGGATGATTTGACATTAACTCAACTTTTTAATTTTTAATTTTTAATGTTCACATTCTTGGGTAAGAAATTATTTCGCTGGTTTAGTGTTGTGAGTTTTGATTCCACCTGGTTAGCTTCTATAATTTCTGATGCCCAAAACTTTGTTTCATATGCTTTTCATACTCCTAAGTGCCGAACTCTGTCTTTGTGCTATTTTTGTGGTTTTTAGTTTTGG

mRNA sequence

ATGGCGGACGAGGTGAACAGAGCTACTTTCTTGGAAATTCAAGGTCGCATGATTGAAATTACTGGAAAGCTGAAGCAGTTGCAAACCCAGATACGAAACAAGGAGGGAGAGAAGAAGCGCGCTTTTTTGACCTTGGAGGAACTTAAACAGTTGGCTGAAGACACTAATACATACAAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTCTAATGAATGAGCAGGAGCAAAAGTTCAAAGATAGTGAAACTGCAATTGCCTCGCTCCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCTATGTCTGTAGCATAG

Coding sequence (CDS)

ATGGCGGACGAGGTGAACAGAGCTACTTTCTTGGAAATTCAAGGTCGCATGATTGAAATTACTGGAAAGCTGAAGCAGTTGCAAACCCAGATACGAAACAAGGAGGGAGAGAAGAAGCGCGCTTTTTTGACCTTGGAGGAACTTAAACAGTTGGCTGAAGACACTAATACATACAAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTCTAATGAATGAGCAGGAGCAAAAGTTCAAAGATAGTGAAACTGCAATTGCCTCGCTCCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCTATGTCTGTAGCATAG

Homology

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BLAST of CSPI02G06820 vs. Swiss-Prot
Match: PFD1_BOVIN (Prefoldin subunit 1 OS=Bos taurus GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-13
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 1


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELL 114
           L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CSPI02G06820 vs. Swiss-Prot
Match: PFD1_PONAB (Prefoldin subunit 1 OS=Pongo abelii GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 1


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELL 114
           L+SK  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CSPI02G06820 vs. Swiss-Prot
Match: PFD1_MOUSE (Prefoldin subunit 1 OS=Mus musculus GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/107 (37.38%), Postives = 64/107 (59.81%), Query Frame = 1


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELL 114
           L+SK V+ N+  +K K ++  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CSPI02G06820 vs. Swiss-Prot
Match: PFD1_HUMAN (Prefoldin subunit 1 OS=Homo sapiens GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 1


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELL 114
           L+SK  + ++  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CSPI02G06820 vs. Swiss-Prot
Match: PFD1_DANRE (Prefoldin subunit 1 OS=Danio rerio GN=pfdn1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 1


Query: 7   RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKSIGRTFV 66
           +  F E+Q +M++   K+K    QI      KK A LT  E+  L E T  ++  GR F+
Sbjct: 10  KKAFAELQAKMVDTQQKVKLADLQIEQLSRVKKHANLTHGEITSLPESTRMFEGAGRMFI 69

Query: 67  LESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELL 114
           L+SK  + N+  +K K ++  I  L+  K YLE+ + + E+N+RE+L
Sbjct: 70  LQSKGEISNQLLEKQKTADDKIKELEQKKTYLERSVKDAEDNIREML 116

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BLAST of CSPI02G06820 vs. TrEMBL
Match: A0A0A0LJF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070850 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-60
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

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BLAST of CSPI02G06820 vs. TrEMBL
Match: A0A061FRM5_THECC (Prefoldin 1 OS=Theobroma cacao GN=TCM_044384 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-52
Identity = 111/128 (86.72%), Postives = 122/128 (95.31%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVN+  FLEIQGRMIE+TGKLKQ+Q Q+RNKEGEKKRA+LTLEEL+QL++DTNTYKS
Sbjct: 1   MADEVNKTAFLEIQGRMIELTGKLKQVQNQMRNKEGEKKRAYLTLEELRQLSDDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE K VLMNEQEQK KDSE+AIASLQ+SKEYLEKQMAEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKPVLMNEQEQKLKDSESAIASLQTSKEYLEKQMAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSMSV 129
           RQIMSMSV
Sbjct: 121 RQIMSMSV 128

[Close]

BLAST of CSPI02G06820 vs. TrEMBL
Match: M1B245_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013569 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-51
Identity = 110/129 (85.27%), Postives = 120/129 (93.02%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADE NR  F+EIQGRMIE TGKLKQ+QTQIRNKE EKKRA+LTLEELKQL++DTNTYK+
Sbjct: 1   MADEANRTAFIEIQGRMIETTGKLKQVQTQIRNKETEKKRAYLTLEELKQLSDDTNTYKA 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE K+VLMNEQEQK KD ETAIASLQ+SKEYLEK MAEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKAVLMNEQEQKLKDGETAIASLQTSKEYLEKHMAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSMSVA 130
           RQIM+MSVA
Sbjct: 121 RQIMTMSVA 129

[Close]

BLAST of CSPI02G06820 vs. TrEMBL
Match: A0A0D2UW73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G302200 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.1e-51
Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVN+  FLEIQGRMIE+TGKLKQ+Q Q+R KEGEKKRAFLTLEEL QL +DTNTYKS
Sbjct: 1   MADEVNKTAFLEIQGRMIELTGKLKQVQNQMRTKEGEKKRAFLTLEELNQLPDDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE KSVL+NEQEQK KDSE+AI SLQSSKEY+EKQ+AEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKSVLVNEQEQKLKDSESAIGSLQSSKEYMEKQLAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSMSV 129
           RQIMSMSV
Sbjct: 121 RQIMSMSV 128

[Close]

BLAST of CSPI02G06820 vs. TrEMBL
Match: K4CEC3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-50
Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADE NR  F+EIQGRMIE TGKLKQ+QTQIRNKE EKKRA+LTLEELKQL++DTNTYK+
Sbjct: 1   MADEANRTAFIEIQGRMIETTGKLKQVQTQIRNKETEKKRAYLTLEELKQLSDDTNTYKA 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE K+VLMNEQEQK KD ETAIASLQ+SKEYLEK MAEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKAVLMNEQEQKLKDGETAIASLQTSKEYLEKHMAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSM 127
           RQIM+M
Sbjct: 121 RQIMTM 126

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BLAST of CSPI02G06820 vs. TAIR10
Match: AT2G07340.1 (AT2G07340.1 PREFOLDIN 1)

HSP 1 Score: 192.2 bits (487), Expect = 2.0e-49
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADE  RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TNTYKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE K+VL  EQEQK KDSE A+ASLQ+SKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGRTFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 128

[Close]

BLAST of CSPI02G06820 vs. NCBI nr
Match: gi|449470285|ref|XP_004152848.1| (PREDICTED: prefoldin subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 5.3e-60
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CSPI02G06820 vs. NCBI nr
Match: gi|659069519|ref|XP_008450462.1| (PREDICTED: probable prefoldin subunit 1 isoform X1 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-55
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MA+E NR TFLEIQGRMIEITGKLKQLQTQIR KEGEKKRAFLTLEELKQL+EDTNTYKS
Sbjct: 1   MANEANRDTFLEIQGRMIEITGKLKQLQTQIRGKEGEKKRAFLTLEELKQLSEDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLE+QMAEVENNLRELLQ DPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLERQMAEVENNLRELLQLDPGIA 120

Query: 121 RQIMSMSV 129
           RQIMSMS+
Sbjct: 121 RQIMSMSI 128

[Close]

BLAST of CSPI02G06820 vs. NCBI nr
Match: gi|449470287|ref|XP_004152849.1| (PREDICTED: prefoldin subunit 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 6.7e-55
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGI 120
           IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGI
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGI 119

[Close]

BLAST of CSPI02G06820 vs. NCBI nr
Match: gi|590567402|ref|XP_007010507.1| (Prefoldin 1 [Theobroma cacao])

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-52
Identity = 111/128 (86.72%), Postives = 122/128 (95.31%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADEVN+  FLEIQGRMIE+TGKLKQ+Q Q+RNKEGEKKRA+LTLEEL+QL++DTNTYKS
Sbjct: 1   MADEVNKTAFLEIQGRMIELTGKLKQVQNQMRNKEGEKKRAYLTLEELRQLSDDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE K VLMNEQEQK KDSE+AIASLQ+SKEYLEKQMAEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKPVLMNEQEQKLKDSESAIASLQTSKEYLEKQMAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSMSV 129
           RQIMSMSV
Sbjct: 121 RQIMSMSV 128

[Close]

BLAST of CSPI02G06820 vs. NCBI nr
Match: gi|720093672|ref|XP_010246123.1| (PREDICTED: prefoldin subunit 1 [Nelumbo nucifera])

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 1


Query: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60
           MADE NR  FLEIQGRMIEITGKLKQ+Q Q+RNKEGEKKRAFLTLEEL+QL +DTNTYKS
Sbjct: 1   MADETNRTAFLEIQGRMIEITGKLKQVQNQMRNKEGEKKRAFLTLEELRQLTDDTNTYKS 60

Query: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE KSVL+ EQEQK KDSETAIASLQ+SKEYLEKQMAEVE+NLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKSVLVKEQEQKLKDSETAIASLQTSKEYLEKQMAEVESNLRELLQQDPGLA 120

Query: 121 RQIMSMSV 129
           RQIMSM+V
Sbjct: 121 RQIMSMTV 128

The following BLAST results are available for this feature:

BLAST of CSPI02G06820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD1_BOVIN	8.3e-13	37.38	Prefoldin subunit 1 OS=Bos taurus GN=PFDN1 PE=2 SV=1	[more]
PFD1_PONAB	1.1e-12	37.38	Prefoldin subunit 1 OS=Pongo abelii GN=PFDN1 PE=2 SV=1	[more]
PFD1_MOUSE	1.1e-12	37.38	Prefoldin subunit 1 OS=Mus musculus GN=Pfdn1 PE=1 SV=1	[more]
PFD1_HUMAN	4.1e-12	36.45	Prefoldin subunit 1 OS=Homo sapiens GN=PFDN1 PE=1 SV=2	[more]
PFD1_DANRE	1.7e-10	34.58	Prefoldin subunit 1 OS=Danio rerio GN=pfdn1 PE=2 SV=1	[more]

BLAST of CSPI02G06820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJF7_CUCSA	3.7e-60	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070850 PE=4 SV=1	[more]
A0A061FRM5_THECC	1.7e-52	86.72	Prefoldin 1 OS=Theobroma cacao GN=TCM_044384 PE=4 SV=1	[more]
M1B245_SOLTU	1.4e-51	85.27	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013569 PE=4 SV=1	[more]
A0A0D2UW73_GOSRA	4.1e-51	85.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G302200 PE=4 SV=1	[more]
K4CEC3_SOLLC	3.5e-50	84.92	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CSPI02G06820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07340.1	2.0e-49	78.13	PREFOLDIN 1	[more]

BLAST of CSPI02G06820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470285\|ref\|XP_004152848.1\|	5.3e-60	100.00	PREDICTED: prefoldin subunit 1 isoform X1 [Cucumis sativus]	[more]
gi\|659069519\|ref\|XP_008450462.1\|	1.8e-55	93.75	PREDICTED: probable prefoldin subunit 1 isoform X1 [Cucumis melo]	[more]
gi\|449470287\|ref\|XP_004152849.1\|	6.7e-55	100.00	PREDICTED: prefoldin subunit 1 isoform X2 [Cucumis sativus]	[more]
gi\|590567402\|ref\|XP_007010507.1\|	2.4e-52	86.72	Prefoldin 1 [Theobroma cacao]	[more]
gi\|720093672\|ref\|XP_010246123.1\|	1.2e-51	86.72	PREDICTED: prefoldin subunit 1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR009053	Prefoldin
IPR002777	PFD_beta-like
IPR009053	Prefoldin

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06820.1	CSPI02G06820.1	mRNA
CSPI02G06820.2	CSPI02G06820.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..93 score: 6.9
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 12..95 score: 6.7
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 10..94 score: 1.39
None	No IPR available	unknown	Coil	Coil	coord: 17..51 scor
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..92 score: 8.8
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..92 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G06820	Cla005768	Watermelon (97103) v1	cpiwmB166
CSPI02G06820	Csa2G070850	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G06820	MELO3C003910	Melon (DHL92) v3.5.1	cpimeB139
CSPI02G06820	ClCG11G011210	Watermelon (Charleston Gray)	cpiwcgB110
CSPI02G06820	Lsi11G008300	Bottle gourd (USVL1VR-Ls)	cpilsiB096
CSPI02G06820	MELO3C003910.2	Melon (DHL92) v3.6.1	cpimedB132
CSPI02G06820	CsaV3_2G009230	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G06820	Bhi06G001029	Wax gourd	cpiwgoB133
CSPI02G06820	Cucsa.178890	Cucumber (Gy14) v1	cgycpiB284
CSPI02G06820	CmaCh12G009360	Cucurbita maxima (Rimu)	cmacpiB166
CSPI02G06820	CmoCh12G009370	Cucurbita moschata (Rifu)	cmocpiB151
CSPI02G06820	CmoCh05G007760	Cucurbita moschata (Rifu)	cmocpiB784
CSPI02G06820	Cp4.1LG07g07680	Cucurbita pepo (Zucchini)	cpecpiB812
CSPI02G06820	Cp4.1LG11g06640	Cucurbita pepo (Zucchini)	cpecpiB094
CSPI02G06820	CsGy2G006990	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G06820	Carg19821	Silver-seed gourd	carcpiB0191
CSPI02G06820	Carg22670	Silver-seed gourd	carcpiB0005

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G06820	Cucurbita maxima (Rimu)	cmacpiB795
CSPI02G06820	Watermelon (97103) v2	cpiwmbB111