CSPI01G22550 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G22550
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Secretion protein HlyD family protein
Location	Chr1 : 18137702 .. 18140955 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCTTTGATGTTTCTAAACTTCATTTGAATCGAACCTCATTGTTCTTCACTCTCTCTTTCTCTCTTCATCTTCAAAAACTCTTTCAAAATTATATCCAAACAAGAAAAAGAGTACACAACACACAACACCCTATTGATCATCAGCCATGGATGCCCACAATGAAAATATGGTAAAAACATACTGCTTCTCATCCCTCTCTTTCCCTCTAGATATCTCCACACTTCATTTTTCTTTTGTAATTCTATGTTAATTTTTGACTTCTATTGGATGATTGTAACCATTAAGGAGTGCTTGAGGGCACATATATATGATGTGAAATATAATAGTGAGGCCTAAGGAGTTGTGAACTTTTGAATTCATAGTATAAGAAGATATAAAATTGATGTTTTTAACCATGTGAGACGGATGTTTTGATTTGGGGTTTAGGGTTGATGGTTATTTACATAGATTTTTGTACAAATTACCTAAAGTTTATGCTAAAGAATGTCATTTGACTAATTGACACAAGTTTTGAAAACTAGAAAGAGTAACATTTTACAAATGCGGTCAAAGTTTTCAAAGTGGAAGGCAAGAAGGGAGAGTGTGAAGGAGGAGTATTGAAGAAAAGAAAAGGCTATACATTCCATATTTTCAAAATCTGGATCAAACACCATTTTTTACACATGAAAGTTAGATAATCCATAATCCATACAAAAAAAAGTACTGTTAGTTGAAAAGTAATTGAGTAGAGGAACGTTATTTGATATTGTCCTTTTAAGGTTCATATTGAATAATTATATATATATATACACATTTGTAGGAAGAAAAGTGTGATGTGTGTGGTGATATTGGGTATAATGAAGTAATTTTCACTTGCTCTAACTGCAAAATAGCTCGTGAGCACATGTAAGTTTTTATCTTCTTTTCTTCTATATATCAACGCTTTTGTTTTGTTTTTTGTTTCTATATATATGTAACACTTGAATTTGACGTTAAATTTACAAAGTAAAAACACGTTTTTGGTTTTTAATTTAATTTTTGTTTTTGAAATTTGGCTAAAATATTCCATTCTTTTACTTTAAAAAACTAAAAAATTGTGTACAAAATTAAGAAAAACTCTACTCAACTCTTTAAAAGAAAACTATAAAAACAAAAGTCAAATGGTAATGAAAGGGATGTTAGTTTTAGTCTTAGTTTGATTATTACTTAAATTTTGTTTCCATTGCTTACTTTTGTGATGTTTTGGTGTATTTTTCTGTAGCAGTTATTGTATGAGTGTTCATAACTTCGAGAAACTCCCAGAAAGTTGGGTTTGTGATTCATGTAAGGCCAAGTACATCAGAAACCTTGTTCATGAATCTTCAACAAATGTTGTTGCTTCCATTGTTGGACAACTTCAGCTTCAACAACCATCCACTAAATCTCAAGGTTCTTTTTCCCCCTAATGTATTCATGCTATCTAATATGGCATTTGAGCCTATGAAGGCAAACAGATGTTTGGTGTTAGAAAAAAAAGTTCAACGTCCCATTAAGAATATTGAACTGAAAAAGGCACTGTCTTAAGTAAAAGAATTGAATAGTCTTAGCCAAATTTCAAAGCATTATGATCGGCTAAAAGCAGAGAGAGTGTGAAGGTACTTTTGCCATTTTCATATATGATGAAAATTTAGAAGGAATTTCAAGCAAACAGTCAAAAGCACTTTTTCAATGGTTGTCATATTATGAAAGTAACTTTTTAGTTTCAAAATATTCATATCCCTTCACTGATGTAGTACTCTCCTCCAGCTTTTTTGGCAATTAACAACACAGTTAGCAAATGCAATGCAGCTAAGAAGGTTCAACTTGGTTCAACCCTAATACAACAACAAAATTTGGTTGCCCAAGAACTTGCTCCATTACTCCATAAACAAGACGATCTTGGTGAGTGCCTCATTTCGATTTGGCCTCCCAGGTTCCATTAGTTAAAGTGTTAATATAATTATTTTTGGAGCAATAGATGATTCGCATGCGTATATATATATAGTCTCAACCTAATGTGGTTAGCCATTTTGAGTTTCAACTTTTTCTTGACTTGCTTTAGACATAGCTACTCGTCGTACCTCTTTATTCGAGCGTGAGCAGAGGCGGGTTGCTAGAGCTGCTCGTCGAACTTCCTCTTCATCGAACCAACTTCCCAACATCAACCCATTTGTGTATCAAGGGTCTTATTCCTCCGAGGTTGATGAGATTGAGTATTTAAAAAGGACATTTGACATTTGGCGCGGGTTAGTAGAATTCCCCACGGAAGGGGAGTCAGGTTTTCAAGACCCAAGCCAAGGTTTTATCTTGGGGTTGCATGACTTTCGACGAGTGAGTTCGATATCTACAACTTACATTTTGTTAGATGATACAATATTAAATTTGTCCCCATATCCATTTCAAATTAAGCTCTTTCATCTACAAGAAACAGCGCTGGATTTGCACCATGATTAGTGTTTAAATTTTTTTTGTATAAACTGGTATATGTAAGATTTTTTTCTTTCTTTTTCTTTCTTCCCCTGTAACCAATTTTTTATGTAGTAGGCTTTCACACGTTTCTCCATCTCTTTTGGGAGAATGGGAGATGAGCTTAATCACCTTTACCTCAATTACGTTCCTCGAGAAGAGCTAATGCGTGCCAACCGACGATTAGAAGAGGCTAAAGTCGAACTCGGATTATGTCAAGCTAGCTCTCAAGTCAAGATTGACAAACTCAAGGCTCAACTAACTGAAGCAAAATCTGAGTTGTCTGATGCTAAATGCTTGGCTGAGAAGTTTAGCAAGACAGAAGAGTTTGTGGTTATGCAGAACAAAATAATGGAGTGTGGCGTAAATTGGTCGGTTCGACAAGCTTCGATAGAGCATCCAGGAATCGACTTCAGTTTCCTCCCAATTCGTTTTAAGGCTGCGTGCGATAATAACTTTGATGACACAAGATTAGAGCCTTGTTCACCAGCCAAAGAAGGAGATCAAGAACAGTTTCATGATTCTTTGGAAATGAATGGAGTTGATTCTGACATGAGCAGTTGAACTCTCACTCTGGATATACGTTTTTTTGCATTTTGACTTCAGCTTGTTGTGGACACATCAAAAAGTTTGAGGAATCGAGTCATAATAGTTGGTGTCTTTCCGGTTCTTATATCTTACAATTAACTATACCCTTACTATTTCAAATCCCTCATTTGTTATAGATTTTGCTATCTTCTTATACCATCCCCTCTCTTTGATGAAGGTCATAAAATCCATGTTTTTAC

mRNA sequence

ATGGATGCCCACAATGAAAATATGGAAGAAAAGTGTGATGTGTGTGGTGATATTGGGTATAATGAAGTAATTTTCACTTGCTCTAACTGCAAAATAGCTCGTGAGCACATCAGTTATTGTATGAGTGTTCATAACTTCGAGAAACTCCCAGAAAGTTGGGTTTGTGATTCATGTAAGGCCAAGTACATCAGAAACCTTGTTCATGAATCTTCAACAAATGTTGTTGCTTCCATTGTTGGACAACTTCAGCTTCAACAACCATCCACTAAATCTCAAGCTTTTTTGGCAATTAACAACACAGTTAGCAAATGCAATGCAGCTAAGAAGGTTCAACTTGGTTCAACCCTAATACAACAACAAAATTTGGTTGCCCAAGAACTTGCTCCATTACTCCATAAACAAGACGATCTTGACATAGCTACTCGTCGTACCTCTTTATTCGAGCGTGAGCAGAGGCGGGTTGCTAGAGCTGCTCGTCGAACTTCCTCTTCATCGAACCAACTTCCCAACATCAACCCATTTGTGTATCAAGGGTCTTATTCCTCCGAGGTTGATGAGATTGAGTATTTAAAAAGGACATTTGACATTTGGCGCGGGTTAGTAGAATTCCCCACGGAAGGGGAGTCAGGTTTTCAAGACCCAAGCCAAGGTTTTATCTTGGGGTTGCATGACTTTCGACGAGCTTTCACACGTTTCTCCATCTCTTTTGGGAGAATGGGAGATGAGCTTAATCACCTTTACCTCAATTACGTTCCTCGAGAAGAGCTAATGCGTGCCAACCGACGATTAGAAGAGGCTAAAGTCGAACTCGGATTATGTCAAGCTAGCTCTCAAGTCAAGATTGACAAACTCAAGGCTCAACTAACTGAAGCAAAATCTGAGTTGTCTGATGCTAAATGCTTGGCTGAGAAGTTTAGCAAGACAGAAGAGTTTGTGGTTATGCAGAACAAAATAATGGAGTGTGGCGTAAATTGGTCGGTTCGACAAGCTTCGATAGAGCATCCAGGAATCGACTTCAGTTTCCTCCCAATTCGTTTTAAGGCTGCGTGCGATAATAACTTTGATGACACAAGATTAGAGCCTTGTTCACCAGCCAAAGAAGGAGATCAAGAACAGTTTCATGATTCTTTGGAAATGAATGGAGTTGATTCTGACATGAGCAGTTGA

Coding sequence (CDS)

ATGGATGCCCACAATGAAAATATGGAAGAAAAGTGTGATGTGTGTGGTGATATTGGGTATAATGAAGTAATTTTCACTTGCTCTAACTGCAAAATAGCTCGTGAGCACATCAGTTATTGTATGAGTGTTCATAACTTCGAGAAACTCCCAGAAAGTTGGGTTTGTGATTCATGTAAGGCCAAGTACATCAGAAACCTTGTTCATGAATCTTCAACAAATGTTGTTGCTTCCATTGTTGGACAACTTCAGCTTCAACAACCATCCACTAAATCTCAAGCTTTTTTGGCAATTAACAACACAGTTAGCAAATGCAATGCAGCTAAGAAGGTTCAACTTGGTTCAACCCTAATACAACAACAAAATTTGGTTGCCCAAGAACTTGCTCCATTACTCCATAAACAAGACGATCTTGACATAGCTACTCGTCGTACCTCTTTATTCGAGCGTGAGCAGAGGCGGGTTGCTAGAGCTGCTCGTCGAACTTCCTCTTCATCGAACCAACTTCCCAACATCAACCCATTTGTGTATCAAGGGTCTTATTCCTCCGAGGTTGATGAGATTGAGTATTTAAAAAGGACATTTGACATTTGGCGCGGGTTAGTAGAATTCCCCACGGAAGGGGAGTCAGGTTTTCAAGACCCAAGCCAAGGTTTTATCTTGGGGTTGCATGACTTTCGACGAGCTTTCACACGTTTCTCCATCTCTTTTGGGAGAATGGGAGATGAGCTTAATCACCTTTACCTCAATTACGTTCCTCGAGAAGAGCTAATGCGTGCCAACCGACGATTAGAAGAGGCTAAAGTCGAACTCGGATTATGTCAAGCTAGCTCTCAAGTCAAGATTGACAAACTCAAGGCTCAACTAACTGAAGCAAAATCTGAGTTGTCTGATGCTAAATGCTTGGCTGAGAAGTTTAGCAAGACAGAAGAGTTTGTGGTTATGCAGAACAAAATAATGGAGTGTGGCGTAAATTGGTCGGTTCGACAAGCTTCGATAGAGCATCCAGGAATCGACTTCAGTTTCCTCCCAATTCGTTTTAAGGCTGCGTGCGATAATAACTTTGATGACACAAGATTAGAGCCTTGTTCACCAGCCAAAGAAGGAGATCAAGAACAGTTTCATGATTCTTTGGAAATGAATGGAGTTGATTCTGACATGAGCAGTTGA

Homology

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BLAST of CSPI01G22550 vs. TrEMBL
Match: A0A0A0LXX2_CUCSA (Secretion protein HlyD family protein OS=Cucumis sativus GN=Csa_1G495250 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.5e-77
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 1


Query: 239 MGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDA 298
           MGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDA
Sbjct: 1   MGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDA 60

Query: 299 KCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTR 358
           KCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTR
Sbjct: 61  KCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTR 120

Query: 359 LEPCSPAKEGDQEQFHDSLEMNGVDSDMSS 389
           LEPCSPAKEGDQEQFHDSLEMN VDSDMSS
Sbjct: 121 LEPCSPAKEGDQEQFHDSLEMNRVDSDMSS 150

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BLAST of CSPI01G22550 vs. TrEMBL
Match: G7IWF3_MEDTR (RING/FYVE/PHD zinc finger protein, putative OS=Medicago truncatula GN=MTR_3g025330 PE=4 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-07
Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 1


Query: 10 EKCDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEKLPESWVCDSCKA 61
          E CD+CG  G+ EVI TCS CK+ REH+ YCM + N  ++P+ W+C+ C++
Sbjct: 12 EPCDICGHFGFGEVIVTCSKCKVNREHV-YCMKI-NLMEVPDYWLCEPCQS 60

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BLAST of CSPI01G22550 vs. TAIR10
Match: AT4G17850.1 (AT4G17850.1 BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1))

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 1


Query: 3  AHNENMEEKCDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEKLPESWVCDSC 59
          +H E     CD CGD GY  ++  C NC +  EH +YCM +   +K+P+SW C  C
Sbjct: 31 SHIEREITVCDTCGDQGYEYLLVICCNCGVGAEH-TYCM-MEKIDKVPDSWSCYDC 84

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BLAST of CSPI01G22550 vs. NCBI nr
Match: gi|659115381|ref|XP_008457529.1| (PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo])

HSP 1 Score: 685.3 bits (1767), Expect = 6.4e-194
Identity = 357/389 (91.77%), Postives = 362/389 (93.06%), Query Frame = 1


Query: 1   MDAHNENMEEKCDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEKLPESWVCDSCKA 60
           MD HNENMEE CDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEK PESWVCDSCKA
Sbjct: 1   MDPHNENMEEMCDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEKFPESWVCDSCKA 60

Query: 61  KYIRNLVHESSTNVVASIVGQLQLQQPSTKSQAFLAINNTVSKCNAAKKVQLGSTLIQQQ 120
             IRNLVHESSTNVV      LQLQQPSTKSQA LAINNTVSKCN AKKVQ GSTLI+QQ
Sbjct: 61  N-IRNLVHESSTNVVG-----LQLQQPSTKSQALLAINNTVSKCN-AKKVQFGSTLIKQQ 120

Query: 121 NLVAQELAPLLHKQD-DLDIATRRTSLFEREQRRVARAARRTSSSSNQLPNINPFVYQGS 180
           N VAQELAPL+HKQD D  IATRRTSLFEREQRRV RAA RT  SSNQLPNINPFVYQGS
Sbjct: 121 NFVAQELAPLVHKQDQDPGIATRRTSLFEREQRRVERAACRT--SSNQLPNINPFVYQGS 180

Query: 181 YSSEVDEIEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM 240
            SSEVDEIEYLKRTFDIWRGLVEFP EGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM
Sbjct: 181 CSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM 240

Query: 241 GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAK 300
           GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQL EAKS+LSDAK
Sbjct: 241 GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAK 300

Query: 301 CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTRL 360
           CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDD+RL
Sbjct: 301 CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDSRL 360

Query: 361 EPCSPAKEGDQEQFHDSLEMNGVDSDMSS 389
           EPCSPAKEG +EQFHDSLEMN VDSDMSS
Sbjct: 361 EPCSPAKEG-EEQFHDSLEMNRVDSDMSS 379

[Close]

BLAST of CSPI01G22550 vs. NCBI nr
Match: gi|659115383|ref|XP_008457530.1| (PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo])

HSP 1 Score: 679.1 bits (1751), Expect = 4.6e-192
Identity = 356/389 (91.52%), Postives = 361/389 (92.80%), Query Frame = 1


Query: 1   MDAHNENMEEKCDVCGDIGYNEVIFTCSNCKIAREHISYCMSVHNFEKLPESWVCDSCKA 60
           MD HNENMEE CDVCGDIGYNEVIFTCSNCKIAREHI YCMSVHNFEK PESWVCDSCKA
Sbjct: 1   MDPHNENMEEMCDVCGDIGYNEVIFTCSNCKIAREHI-YCMSVHNFEKFPESWVCDSCKA 60

Query: 61  KYIRNLVHESSTNVVASIVGQLQLQQPSTKSQAFLAINNTVSKCNAAKKVQLGSTLIQQQ 120
             IRNLVHESSTNVV      LQLQQPSTKSQA LAINNTVSKCN AKKVQ GSTLI+QQ
Sbjct: 61  N-IRNLVHESSTNVVG-----LQLQQPSTKSQALLAINNTVSKCN-AKKVQFGSTLIKQQ 120

Query: 121 NLVAQELAPLLHKQD-DLDIATRRTSLFEREQRRVARAARRTSSSSNQLPNINPFVYQGS 180
           N VAQELAPL+HKQD D  IATRRTSLFEREQRRV RAA RT  SSNQLPNINPFVYQGS
Sbjct: 121 NFVAQELAPLVHKQDQDPGIATRRTSLFEREQRRVERAACRT--SSNQLPNINPFVYQGS 180

Query: 181 YSSEVDEIEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM 240
            SSEVDEIEYLKRTFDIWRGLVEFP EGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM
Sbjct: 181 CSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRM 240

Query: 241 GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAK 300
           GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQL EAKS+LSDAK
Sbjct: 241 GDELNHLYLNYVPREELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAK 300

Query: 301 CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTRL 360
           CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDD+RL
Sbjct: 301 CLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDSRL 360

Query: 361 EPCSPAKEGDQEQFHDSLEMNGVDSDMSS 389
           EPCSPAKEG +EQFHDSLEMN VDSDMSS
Sbjct: 361 EPCSPAKEG-EEQFHDSLEMNRVDSDMSS 378

[Close]

BLAST of CSPI01G22550 vs. NCBI nr
Match: gi|659115385|ref|XP_008457531.1| (PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo])

HSP 1 Score: 608.6 bits (1568), Expect = 7.6e-171
Identity = 322/352 (91.48%), Postives = 327/352 (92.90%), Query Frame = 1


Query: 38  SYCMSVHNFEKLPESWVCDSCKAKYIRNLVHESSTNVVASIVGQLQLQQPSTKSQAFLAI 97
           SYCMSVHNFEK PESWVCDSCKA  IRNLVHESSTNVV      LQLQQPSTKSQA LAI
Sbjct: 5   SYCMSVHNFEKFPESWVCDSCKAN-IRNLVHESSTNVVG-----LQLQQPSTKSQALLAI 64

Query: 98  NNTVSKCNAAKKVQLGSTLIQQQNLVAQELAPLLHKQD-DLDIATRRTSLFEREQRRVAR 157
           NNTVSKCN AKKVQ GSTLI+QQN VAQELAPL+HKQD D  IATRRTSLFEREQRRV R
Sbjct: 65  NNTVSKCN-AKKVQFGSTLIKQQNFVAQELAPLVHKQDQDPGIATRRTSLFEREQRRVER 124

Query: 158 AARRTSSSSNQLPNINPFVYQGSYSSEVDEIEYLKRTFDIWRGLVEFPTEGESGFQDPSQ 217
           AA RT  SSNQLPNINPFVYQGS SSEVDEIEYLKRTFDIWRGLVEFP EGESGFQDPSQ
Sbjct: 125 AACRT--SSNQLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQ 184

Query: 218 GFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQAS 277
           GFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQAS
Sbjct: 185 GFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQAS 244

Query: 278 SQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPG 337
           SQVKIDKLKAQL EAKS+LSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPG
Sbjct: 245 SQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPG 304

Query: 338 IDFSFLPIRFKAACDNNFDDTRLEPCSPAKEGDQEQFHDSLEMNGVDSDMSS 389
           IDFSFLPIRFKAACDNNFDD+RLEPCSPAKEG +EQFHDSLEMN VDSDMSS
Sbjct: 305 IDFSFLPIRFKAACDNNFDDSRLEPCSPAKEG-EEQFHDSLEMNRVDSDMSS 346

[Close]

BLAST of CSPI01G22550 vs. NCBI nr
Match: gi|659115387|ref|XP_008457532.1| (PREDICTED: uncharacterized protein LOC103497199 isoform X4 [Cucumis melo])

HSP 1 Score: 608.2 bits (1567), Expect = 9.9e-171
Identity = 322/353 (91.22%), Postives = 327/353 (92.63%), Query Frame = 1


Query: 37  ISYCMSVHNFEKLPESWVCDSCKAKYIRNLVHESSTNVVASIVGQLQLQQPSTKSQAFLA 96
           I YCMSVHNFEK PESWVCDSCKA  IRNLVHESSTNVV      LQLQQPSTKSQA LA
Sbjct: 3   ICYCMSVHNFEKFPESWVCDSCKAN-IRNLVHESSTNVVG-----LQLQQPSTKSQALLA 62

Query: 97  INNTVSKCNAAKKVQLGSTLIQQQNLVAQELAPLLHKQD-DLDIATRRTSLFEREQRRVA 156
           INNTVSKCN AKKVQ GSTLI+QQN VAQELAPL+HKQD D  IATRRTSLFEREQRRV 
Sbjct: 63  INNTVSKCN-AKKVQFGSTLIKQQNFVAQELAPLVHKQDQDPGIATRRTSLFEREQRRVE 122

Query: 157 RAARRTSSSSNQLPNINPFVYQGSYSSEVDEIEYLKRTFDIWRGLVEFPTEGESGFQDPS 216
           RAA RT  SSNQLPNINPFVYQGS SSEVDEIEYLKRTFDIWRGLVEFP EGESGFQDPS
Sbjct: 123 RAACRT--SSNQLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPS 182

Query: 217 QGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQA 276
           QGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQA
Sbjct: 183 QGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRLEEAKVELGLCQA 242

Query: 277 SSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHP 336
           SSQVKIDKLKAQL EAKS+LSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHP
Sbjct: 243 SSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHP 302

Query: 337 GIDFSFLPIRFKAACDNNFDDTRLEPCSPAKEGDQEQFHDSLEMNGVDSDMSS 389
           GIDFSFLPIRFKAACDNNFDD+RLEPCSPAKEG +EQFHDSLEMN VDSDMSS
Sbjct: 303 GIDFSFLPIRFKAACDNNFDDSRLEPCSPAKEG-EEQFHDSLEMNRVDSDMSS 345

[Close]

BLAST of CSPI01G22550 vs. NCBI nr
Match: gi|778661357|ref|XP_011657959.1| (PREDICTED: uncharacterized protein LOC105435920, partial [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.5e-166
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 1


Query: 84  LQQPSTKSQAFLAINNTVSKCNAAKKVQLGSTLIQQQNLVAQELAPLLHKQDDLDIATRR 143
           LQQPSTKSQAFLAINNTVSKCNAA+KVQLGSTLIQQQNLVAQELAPLLHKQDDLDIATRR
Sbjct: 5   LQQPSTKSQAFLAINNTVSKCNAAEKVQLGSTLIQQQNLVAQELAPLLHKQDDLDIATRR 64

Query: 144 TSLFEREQRRVARAARRTSSSSNQLPNINPFVYQGSYSSEVDEIEYLKRTFDIWRGLVEF 203
           TSLFEREQRRVARAARRTSSSSNQLPNINPFVYQGSYSSEVDE+EYLKRTFDIWRGLVEF
Sbjct: 65  TSLFEREQRRVARAARRTSSSSNQLPNINPFVYQGSYSSEVDEVEYLKRTFDIWRGLVEF 124

Query: 204 PTEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRL 263
           PTEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRL
Sbjct: 125 PTEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMRANRRL 184

Query: 264 EEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGV 323
           EEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGV
Sbjct: 185 EEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGV 244

Query: 324 NWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTRLEPCSPAKEGDQEQFHDSLEMNGVD 383
           NWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTRLEPCSPAKEGDQEQFHDSLEMN VD
Sbjct: 245 NWSVRQASIEHPGIDFSFLPIRFKAACDNNFDDTRLEPCSPAKEGDQEQFHDSLEMNRVD 304

Query: 384 SDMSS 389
           SDMSS
Sbjct: 305 SDMSS 309

The following BLAST results are available for this feature:

BLAST of CSPI01G22550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G22550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXX2_CUCSA	1.5e-77	99.33	Secretion protein HlyD family protein OS=Cucumis sativus GN=Csa_1G495250 PE=4 SV...	[more]
G7IWF3_MEDTR	1.7e-07	49.02	RING/FYVE/PHD zinc finger protein, putative OS=Medicago truncatula GN=MTR_3g0253...	[more]

BLAST of CSPI01G22550 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17850.1	2.5e-07	41.07	BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finge...	[more]

BLAST of CSPI01G22550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115381\|ref\|XP_008457529.1\|	6.4e-194	91.77	PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo]	[more]
gi\|659115383\|ref\|XP_008457530.1\|	4.6e-192	91.52	PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo]	[more]
gi\|659115385\|ref\|XP_008457531.1\|	7.6e-171	91.48	PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo]	[more]
gi\|659115387\|ref\|XP_008457532.1\|	9.9e-171	91.22	PREDICTED: uncharacterized protein LOC103497199 isoform X4 [Cucumis melo]	[more]
gi\|778661357\|ref\|XP_011657959.1\|	1.5e-166	99.02	PREDICTED: uncharacterized protein LOC105435920, partial [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G22550.1	CSPI01G22550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 6..65 score: 1.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 4..62 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 274..301 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G22550	Csa1G495250	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G22550	MELO3C020693	Melon (DHL92) v3.5.1	cpimeB025
CSPI01G22550	MELO3C020693.2	Melon (DHL92) v3.6.1	cpimedB024
CSPI01G22550	CsaV3_1G033720	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G22550	Bhi08G000340	Wax gourd	cpiwgoB041
CSPI01G22550	Cucsa.213530	Cucumber (Gy14) v1	cgycpiB328
CSPI01G22550	CsGy1G022130	Cucumber (Gy14) v2	cgybcpiB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G22550	Wax gourd	cpiwgoB018
CSPI01G22550	Wild cucumber (PI 183967)	cpicpiB024
CSPI01G22550	Wild cucumber (PI 183967)	cpicpiB046
CSPI01G22550	Cucumber (Gy14) v1	cgycpiB053
CSPI01G22550	Cucurbita maxima (Rimu)	cmacpiB220
CSPI01G22550	Cucurbita maxima (Rimu)	cmacpiB430
CSPI01G22550	Cucurbita maxima (Rimu)	cmacpiB544
CSPI01G22550	Cucurbita maxima (Rimu)	cmacpiB584
CSPI01G22550	Cucurbita moschata (Rifu)	cmocpiB206
CSPI01G22550	Cucurbita moschata (Rifu)	cmocpiB420
CSPI01G22550	Cucurbita moschata (Rifu)	cmocpiB572
CSPI01G22550	Cucurbita moschata (Rifu)	cmocpiB573
CSPI01G22550	Cucumber (Chinese Long) v2	cpicuB032
CSPI01G22550	Melon (DHL92) v3.5.1	cpimeB084
CSPI01G22550	Watermelon (Charleston Gray)	cpiwcgB032
CSPI01G22550	Watermelon (Charleston Gray)	cpiwcgB050
CSPI01G22550	Watermelon (Charleston Gray)	cpiwcgB062
CSPI01G22550	Watermelon (97103) v1	cpiwmB023
CSPI01G22550	Watermelon (97103) v1	cpiwmB069
CSPI01G22550	Watermelon (97103) v1	cpiwmB071
CSPI01G22550	Cucurbita pepo (Zucchini)	cpecpiB267
CSPI01G22550	Cucurbita pepo (Zucchini)	cpecpiB507
CSPI01G22550	Cucurbita pepo (Zucchini)	cpecpiB536
CSPI01G22550	Bottle gourd (USVL1VR-Ls)	cpilsiB007
CSPI01G22550	Bottle gourd (USVL1VR-Ls)	cpilsiB031
CSPI01G22550	Melon (DHL92) v3.6.1	cpimedB010
CSPI01G22550	Cucumber (Gy14) v2	cgybcpiB159
CSPI01G22550	Cucumber (Gy14) v2	cgybcpiB253
CSPI01G22550	Silver-seed gourd	carcpiB0336
CSPI01G22550	Silver-seed gourd	carcpiB0337
CSPI01G22550	Silver-seed gourd	carcpiB0476
CSPI01G22550	Silver-seed gourd	carcpiB0762
CSPI01G22550	Cucumber (Chinese Long) v3	cpicucB058
CSPI01G22550	Cucumber (Chinese Long) v3	cpicucB037
CSPI01G22550	Watermelon (97103) v2	cpiwmbB025
CSPI01G22550	Watermelon (97103) v2	cpiwmbB044
CSPI01G22550	Watermelon (97103) v2	cpiwmbB058