Bhi11G002416 (gene) Wax gourd

Overview
NameBhi11G002416
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 78668810 .. 78669007 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAGCGGCGAGGAGCCCACATGTTGTTGGACTAACCTATGGTGTGTTCCGGCGAAGCGCCGGGTTGTTGGTAAGGAGCGTGAGCGGGCGGGGGGCGCGGGACATTCGCAGAGTCTGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCAGATCCCACTCCTAAACATAAGAGACTTTCAACATTTTGA

mRNA sequence

ATGTGCAGCGGCGAGGAGCCCACATGTTGTTGGACTAACCTATGGTGTGTTCCGGCGAAGCGCCGGGTTGTTGGTAAGGAGCGTGAGCGGGCGGGGGGCGCGGGACATTCGCAGAGTCTGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCAGATCCCACTCCTAAACATAAGAGACTTTCAACATTTTGA

Coding sequence (CDS)

ATGTGCAGCGGCGAGGAGCCCACATGTTGTTGGACTAACCTATGGTGTGTTCCGGCGAAGCGCCGGGTTGTTGGTAAGGAGCGTGAGCGGGCGGGGGGCGCGGGACATTCGCAGAGTCTGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCAGATCCCACTCCTAAACATAAGAGACTTTCAACATTTTGA

Protein sequence

MCSGEEPTCCWTNLWCVPAKRRVVGKERERAGGAGHSQSLCLTYHHGTGRSWADPTPKHKRLSTF
Homology
[Close]
BLAST of Bhi11G002416 vs. TrEMBL
Match: tr|A0A2K3KXP4|A0A2K3KXP4_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g058006 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-05
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 32  GGAGHSQSLCLTYHHGTGRSWADPTPKHK 61
           GGAG S+S CL YHH TGRSWADP PKHK
Sbjct: 88  GGAGRSRSPCLPYHHRTGRSWADPAPKHK 116

[Close]
BLAST of Bhi11G002416 vs. NCBI nr
Match: PNX71049.1 (hypothetical protein L195_g058006 [Trifolium pratense])

HSP 1 Score: 56.2 bits (134), Expect = 4.7e-05
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 32  GGAGHSQSLCLTYHHGTGRSWADPTPKHK 61
           GGAG S+S CL YHH TGRSWADP PKHK
Sbjct: 88  GGAGRSRSPCLPYHHRTGRSWADPAPKHK 116

The following BLAST results are available for this feature:
BLAST of Bhi11G002416 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G002416 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G002416 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2K3KXP4|A0A2K3KXP4_TRIPR3.1e-0579.31Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g058006 PE=4 SV=1[more]
BLAST of Bhi11G002416 vs. NCBI nr
Match NameE-valueIdentityDescription
PNX71049.14.7e-0579.31hypothetical protein L195_g058006 [Trifolium pratense][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002416Bhi11M002416mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G002416Cucumber (Gy14) v1cgywgoB673
Bhi11G002416Cucumber (Gy14) v1cgywgoB678
Bhi11G002416Cucumber (Gy14) v2cgybwgoB211
Bhi11G002416Cucumber (Gy14) v2cgybwgoB231
Bhi11G002416Cucurbita maxima (Rimu)cmawgoB0291
Bhi11G002416Cucurbita maxima (Rimu)cmawgoB0302
Bhi11G002416Cucurbita maxima (Rimu)cmawgoB0994
Bhi11G002416Cucurbita moschata (Rifu)cmowgoB0281
Bhi11G002416Cucurbita moschata (Rifu)cmowgoB0292
Bhi11G002416Cucurbita moschata (Rifu)cmowgoB0991
Bhi11G002416Cucurbita pepo (Zucchini)cpewgoB0743
Bhi11G002416Cucurbita pepo (Zucchini)cpewgoB0756
Bhi11G002416Wild cucumber (PI 183967)cpiwgoB220
Bhi11G002416Wild cucumber (PI 183967)cpiwgoB243
Bhi11G002416Cucumber (Chinese Long) v3cucwgoB247
Bhi11G002416Cucumber (Chinese Long) v3cucwgoB225
Bhi11G002416Cucumber (Chinese Long) v2cuwgoB220
Bhi11G002416Cucumber (Chinese Long) v2cuwgoB241
Bhi11G002416Bottle gourd (USVL1VR-Ls)lsiwgoB296
Bhi11G002416Melon (DHL92) v3.6.1medwgoB378
Bhi11G002416Melon (DHL92) v3.6.1medwgoB382
Bhi11G002416Melon (DHL92) v3.5.1mewgoB377
Bhi11G002416Melon (DHL92) v3.5.1mewgoB380
Bhi11G002416Watermelon (Charleston Gray)wcgwgoB087
Bhi11G002416Watermelon (Charleston Gray)wcgwgoB094
Bhi11G002416Watermelon (97103) v2wgowmbB010
Bhi11G002416Watermelon (97103) v2wgowmbB015
Bhi11G002416Watermelon (97103) v1wgowmB014
Bhi11G002416Watermelon (97103) v1wgowmB021
Bhi11G002416Silver-seed gourdcarwgoB0403
Bhi11G002416Silver-seed gourdcarwgoB0521
Bhi11G002416Silver-seed gourdcarwgoB0522