Bhi05G000234 (gene) Wax gourd

Overview
NameBhi05G000234
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 6789473 .. 6791439 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGCCCATCTCAGATGGAACGCTCAGGGTGCGCTTCACATGCCTCCCAATGCCATATCACTGGTCAGTGCTTATCGAATCCACTGATTTTGTTCTTGCCGACACATTGCATCCTTTCATTCTTTCTGTCGTTTCCTTAAGCATTTTGTGGTTTAAGAGTTCCGTATACAATTTCTGATTTGCCATCTTGATTGTTAATCTAATAGATGGATACCTCTTTATTCTTTGAATGTAAGATTTATGCTGAAATTATATTGTGTACAATAACATCTAATGATATCTAGACAAGCCCATAACTAGATTTTGTTGTCTTCACTCACCCTTGACTACCCAAAAAATATATCCAAGTAACATTCTTATATGAAGTGGCATTAGCACTATATGGGCTTCGTGATTACATCATCTTTGTTTGAAAATGAAATCAATCATATCAACCTCCAGATTTGCAATGTCTGAACTAGATATTTTGGGTAATTGGTCTTTAGTTGATTACAATTCATGTGTCTCGATCAATGTGCTAATCAGCACTATGGGGAGAACAGATTCGATAGGGAAGCTGAGAATAAAAGTGCACCAAATCCCACAGTTACTCCATAGATGTATTAAGAATATATTAAATGAATTAGACTTAAACATCTGAAACTTTTGGGTTGTGGGATGAAAAGAAATGAGAAGTTCAGATTCCTAAACTATCATTTTCCTTCTTTATTTGATTTGAACCAAGAGTATTGAAAATGTATTGATAAATCTTTTTTAAGTCTGACAATTTAGATCCTGTTTAATACTGATTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTCCAAAATCATACTTGTCTTCTTACCATGATTTTCATAATATTAGAATTTTTAGTTAAATTTTAAAAACAAAAATAAATTTTTTAAAAATACTTTTTCTAGCTTTCCAAAATTTGCTTGGGTTTTGAAAATAAATTTAAAACGAAGATGACAAAACACAAAAACTCATAGATGATGAAATGCTTGCAAGCTTAATTTTCAAAAACAAAAAATTAAGGTCTTTTTCGTAACCATTTTTCATTTGGTTTTTGTTTTTGAAAATTAGCCTATTTCTTTCTATTTCTTACAATGATTTGCATCTTAATTTTCAAATTTCGGCTTGATTTTTTAAATCATTGGCAAAAAGTAGATAACAAAAGAAGAAATTTAGTATAGACTTAATTTTTGAAGACAAAAACTCAAAAACCAAATCGTTTCTAAACAGGGCTTATCAAACATGTCTTTTGACTCTTGAATTCAGTGATTATTTAAGAGGCCTTAAATTGTATAATCACACTTTAAGATAGGGATCCATATTAAATTGTATAATCACACTTTGAGATAGGGATCCATAGTCTTTCGCTCAGAACAGTATAGAAAATGTTGGTTCTAGAGTGGAGAGTTGTGGTATACTTTTGAGCTGACTAAAATTTTGTCAAACTTTTATGTCTCATTTGGTAACTATTTGGTTTTTTAAAATTATACTTGTTTCACACCATTTTTTAATTATATGTTTTTATTTTTTTTCCTACAAACATTTGAATTTTTAGCTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAGAGTTTTTAAAAACTATTTTTTTAATTTTTAAGTTTTGGTTTAGATTTTAAAACACTCCCAAAAGGTAGACAACAAAAACATTAAAATCAAATTATAGAAGTTGTAGTTACCAAACGAGGTCTTAGTTTAAGTTTTACTATTGTTAGCACCACTCTCTCCATTGGTGCATTCTTTGACTTTCTCCTCTCCATTTTGCAGGAGAAACTCCAAATCAGAAAACGCACATCGAAGCTCAACCACAAACCTAGTCAACCTAACTGTGTATTGCGAGGTACCAATTCCATTGTACTTAATAGGAGGGAATACCAAGTATTTGTTGATGCTCTTTTCCACATCCGGAAGCCTAATCTTAGGGAATATATGTAA

mRNA sequence

ATGCCAGCCCATCTCAGATGGAACGCTCAGGGTGCGCTTCACATGCCTCCCAATGCCATATCACTGGAGAAACTCCAAATCAGAAAACGCACATCGAAGCTCAACCACAAACCTAGTCAACCTAACTGTGTATTGCGAGGTACCAATTCCATTGTACTTAATAGGAGGGAATACCAAGTATTTGTTGATGCTCTTTTCCACATCCGGAAGCCTAATCTTAGGGAATATATGTAA

Coding sequence (CDS)

ATGCCAGCCCATCTCAGATGGAACGCTCAGGGTGCGCTTCACATGCCTCCCAATGCCATATCACTGGAGAAACTCCAAATCAGAAAACGCACATCGAAGCTCAACCACAAACCTAGTCAACCTAACTGTGTATTGCGAGGTACCAATTCCATTGTACTTAATAGGAGGGAATACCAAGTATTTGTTGATGCTCTTTTCCACATCCGGAAGCCTAATCTTAGGGAATATATGTAA

Protein sequence

MPAHLRWNAQGALHMPPNAISLEKLQIRKRTSKLNHKPSQPNCVLRGTNSIVLNRREYQVFVDALFHIRKPNLREYM
Homology
[Close]
BLAST of Bhi05G000234 vs. TrEMBL
Match: tr|A0A0A0KGC8|A0A0A0KGC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410640 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-05
Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 0 

Query: 1   MPAHLRWNAQGALHMPPNAIS-LEKLQIRKRTSKLNHKPSQPNCV--------------- 60
           MP H RWN+   LHMPP +IS LEKLQI+K      H+ S  N V               
Sbjct: 78  MPTHFRWNSHCGLHMPPISISLLEKLQIKKA-----HRSSTTNLVNLTVYWEVLIPLYLI 137

Query: 61  --LRGTNSIVLNRREYQVFVDALFHIRKPNLREYM 78
             ++G   +  N ++     +A+FHIRKPNL+EY+
Sbjct: 138 VKMKGKKFVGGNTKD---MFNAIFHIRKPNLKEYI 164

[Close]
BLAST of Bhi05G000234 vs. NCBI nr
Match: KGN47909.1 (hypothetical protein Csa_6G410640 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 0 

Query: 1   MPAHLRWNAQGALHMPPNAIS-LEKLQIRKRTSKLNHKPSQPNCV--------------- 60
           MP H RWN+   LHMPP +IS LEKLQI+K      H+ S  N V               
Sbjct: 78  MPTHFRWNSHCGLHMPPISISLLEKLQIKKA-----HRSSTTNLVNLTVYWEVLIPLYLI 137

Query: 61  --LRGTNSIVLNRREYQVFVDALFHIRKPNLREYM 78
             ++G   +  N ++     +A+FHIRKPNL+EY+
Sbjct: 138 VKMKGKKFVGGNTKD---MFNAIFHIRKPNLKEYI 164

The following BLAST results are available for this feature:
BLAST of Bhi05G000234 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G000234 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G000234 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KGC8|A0A0A0KGC8_CUCSA1.3e-0538.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410640 PE=4 SV=1[more]
BLAST of Bhi05G000234 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47909.11.9e-0538.95hypothetical protein Csa_6G410640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000234Bhi05M000234mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi05G000234Csa6G410640Cucumber (Chinese Long) v2cuwgoB568
Bhi05G000234ClCG07G000320Watermelon (Charleston Gray)wcgwgoB585
Bhi05G000234Lsi05G009390Bottle gourd (USVL1VR-Ls)lsiwgoB459
Bhi05G000234CsaV3_6G037220Cucumber (Chinese Long) v3cucwgoB585
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G000234Wax gourdwgowgoB077
Bhi05G000234Cucumber (Gy14) v1cgywgoB378
Bhi05G000234Cucumber (Gy14) v2cgybwgoB538
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB0480
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB0482
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB0645
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB0730
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB1114
Bhi05G000234Cucurbita maxima (Rimu)cmawgoB1113
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB0480
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB0482
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB0646
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB0725
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB1112
Bhi05G000234Cucurbita moschata (Rifu)cmowgoB1113
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0195
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0197
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0405
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0321
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0407
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0800
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB0936
Bhi05G000234Cucurbita pepo (Zucchini)cpewgoB1120
Bhi05G000234Wild cucumber (PI 183967)cpiwgoB568
Bhi05G000234Cucumber (Chinese Long) v3cucwgoB581
Bhi05G000234Cucumber (Chinese Long) v2cuwgoB563
Bhi05G000234Bottle gourd (USVL1VR-Ls)lsiwgoB050
Bhi05G000234Bottle gourd (USVL1VR-Ls)lsiwgoB224
Bhi05G000234Melon (DHL92) v3.6.1medwgoB478
Bhi05G000234Melon (DHL92) v3.5.1mewgoB476
Bhi05G000234Watermelon (Charleston Gray)wcgwgoB049
Bhi05G000234Watermelon (Charleston Gray)wcgwgoB526
Bhi05G000234Watermelon (97103) v2wgowmbB261
Bhi05G000234Watermelon (97103) v2wgowmbB278
Bhi05G000234Watermelon (97103) v1wgowmB260
Bhi05G000234Watermelon (97103) v1wgowmB265
Bhi05G000234Watermelon (97103) v1wgowmB288
Bhi05G000234Silver-seed gourdcarwgoB0130
Bhi05G000234Silver-seed gourdcarwgoB0887